Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 6.8e-105 384.0 199 100.0
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 7.6e-96 354.0 192 94.8
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 9.0e-89 330.5 192 89.1
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 1.3e-87 326.6 192 87.0
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 2.8e-82 308.9 192 82.3
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 1.8e-81 306.2 191 83.2
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 1.2e-80 303.5 192 81.2
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 1.1e-78 297.0 199 79.4
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 1.4e-78 296.6 193 80.8
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 2.5e-78 295.8 192 81.2
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 3.2e-78 295.4 192 80.7
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 2.1e-77 292.7 192 78.6
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 2.1e-77 292.7 193 77.7
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 6.0e-77 291.2 192 78.1
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 1.0e-76 290.4 192 78.6
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.3e-76 290.0 192 77.6
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 3.9e-76 288.5 194 79.4
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 5.1e-76 288.1 194 77.8
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 5.1e-76 288.1 194 77.8
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 1.6e-74 283.1 192 77.6
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 2.8e-74 282.3 195 78.5
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 2.8e-74 282.3 193 77.7
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 3.7e-74 282.0 195 77.9
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 3.7e-74 282.0 192 78.1
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 6.3e-74 281.2 193 74.6
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 6.3e-74 281.2 193 74.1
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 6.3e-74 281.2 195 78.5
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 8.2e-74 280.8 192 76.6
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.4e-73 280.0 192 77.6
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 1.4e-73 280.0 193 76.7
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 1.8e-73 279.6 192 77.6
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.8e-73 279.6 192 77.6
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.4e-73 279.3 192 77.1
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 3.1e-73 278.9 197 74.1
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 3.1e-73 278.9 193 74.1
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 4.1e-73 278.5 193 75.6
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 4.1e-73 278.5 192 76.0
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 5.3e-73 278.1 186 74.7
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 6.9e-73 277.7 196 75.5
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 9.0e-73 277.3 192 76.6
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.5e-72 276.6 196 76.0
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 2.0e-72 276.2 192 75.0
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 2.0e-72 276.2 193 75.6
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 2.0e-72 276.2 193 74.6
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 3.4e-72 275.4 193 74.6
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 3.4e-72 275.4 188 76.6
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 4.5e-72 275.0 193 72.0
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 4.5e-72 275.0 197 73.6
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 5.9e-72 274.6 196 75.5
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 5.9e-72 274.6 193 74.6
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 5.9e-72 274.6 194 75.3
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 7.6e-72 274.2 193 74.1
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.0e-71 273.9 197 73.1
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 1.3e-71 273.5 193 72.0
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 2.9e-71 272.3 197 73.1
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 2.9e-71 272.3 197 73.1
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 2.9e-71 272.3 197 73.1
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 2.9e-71 272.3 197 73.1
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 2.9e-71 272.3 188 76.1
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 3.8e-71 271.9 192 75.0
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 3.8e-71 271.9 177 79.1
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 1.1e-70 270.4 195 70.8
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 1.4e-70 270.0 197 72.6
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 1.4e-70 270.0 197 72.6
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 1.4e-70 270.0 189 75.7
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 1.9e-70 269.6 193 70.5
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.9e-70 269.6 193 73.6
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 3.2e-70 268.9 196 72.4
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 4.2e-70 268.5 198 72.2
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 7.2e-70 267.7 199 74.4
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 1.2e-69 266.9 191 72.3
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 1.2e-69 266.9 160 85.6
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 1.6e-69 266.5 192 71.9
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 2.1e-69 266.2 190 73.2
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 2.1e-69 266.2 192 75.0
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 1.0e-68 263.8 191 71.7
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 1.3e-68 263.5 170 75.9
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 1.3e-68 263.5 196 69.9
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 3.0e-68 262.3 161 83.9
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 3.9e-68 261.9 193 74.1
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 5.1e-68 261.5 191 71.7
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 6.7e-68 261.2 213 68.1
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 6.7e-68 261.2 195 68.7
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 8.7e-68 260.8 191 70.7
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 1.5e-67 260.0 191 72.8
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 4.3e-67 258.5 163 81.0
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 5.7e-67 258.1 193 68.9
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 7.4e-67 257.7 197 71.6
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.3e-66 256.9 191 69.6
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 3.7e-66 255.4 159 82.4
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 1.4e-65 253.4 148 87.8
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 4.1e-65 251.9 192 68.8
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 4.1e-65 251.9 159 78.6
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 2.6e-64 249.2 191 69.1
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 3.8e-63 245.4 183 70.5
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 6.5e-63 244.6 187 70.6
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 1.6e-61 240.0 148 86.5
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 1.3e-58 230.3 194 60.8
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 5.0e-47 191.8 166 56.0
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 7.2e-46 188.0 157 55.4
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 2.6e-43 179.5 137 69.3
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 9.7e-43 177.6 106 85.8
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 7.0e-41 171.4 159 52.8
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 7.0e-41 171.4 159 52.8
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 1.2e-40 170.6 177 48.6
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.6e-40 170.2 159 52.2
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.6e-40 170.2 159 52.2
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 1.3e-39 167.2 159 53.5
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 7.2e-38 161.4 103 80.6
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 1.6e-37 160.2 94 87.2
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 1.8e-36 156.8 102 79.4
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 1.3e-34 150.6 103 77.7
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 8.5e-31 137.9 114 67.5
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 6.1e-29 131.7 90 77.8
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 4.9e-26 122.1 86 67.4
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 1.3e-23 114.0 88 67.0
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 3.8e-23 112.5 71 80.3
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 1.1e-22 110.9 152 38.8
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 2.3e-20 103.2 171 34.5
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 3.7e-18 95.9 93 55.9
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 4.9e-18 95.5 88 60.2
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 4.6e-16 89.0 72 59.7
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 5.9e-16 88.6 159 30.2
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 1.8e-12 77.0 156 34.0
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 7.5e-11 71.6 43 79.1
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 8.3e-10 68.2 44 70.5
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 5.4e-09 65.5 91 40.7
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.1e-06 57.8 48 64.6


User provided reference genes

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