Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0146600 Salix brachista HOM05D002746 ORTHO05D003037 6.2e-254 880.6 528 100.0
Potri.004G216000 Populus trichocarpa HOM05D002746 ORTHO05D003037 1.4e-75 288.1 533 41.5
Potri.009G006100 Populus trichocarpa HOM05D002746 ORTHO05D003037 1.0e-62 245.4 227 65.2
Sabra09G0003400 Salix brachista HOM05D002746 ORTHO05D003037 2.0e-55 221.1 217 62.2
Atru.chr3.3527 Acer truncatum HOM05D002746 ORTHO05D003037 2.9e-41 174.1 550 33.5
Manes.11G151800 Manihot esculenta HOM05D002746 ORTHO05D003037 6.4e-41 172.9 187 56.1
Duzib168G1483 Durio zibethinus HOM05D002746 ORTHO05D003037 8.3e-41 172.6 202 53.0
Thecc.09G350400 Theobroma cacao HOM05D002746 ORTHO05D003037 3.3e-37 160.6 259 45.2
Duzib170G0446 Durio zibethinus HOM05D002746 ORTHO05D003037 1.5e-34 151.8 229 45.9
Gorai.009G111300 Gossypium raimondii HOM05D002746 ORTHO05D003037 4.4e-34 150.2 226 47.8
Gohir.D05G107200 Gossypium hirsutum HOM05D002746 ORTHO05D003037 5.8e-34 149.8 200 50.5
Ciclev10028947m.g Citrus clementina HOM05D002746 ORTHO05D003037 9.8e-34 149.1 196 48.5
Gohir.A05G107100 Gossypium hirsutum HOM05D002746 ORTHO05D003037 1.3e-33 148.7 200 50.0
GSVIVG01031478001 Vitis vinifera HOM05D002746 ORTHO05D003037 2.9e-33 147.5 200 52.5
Cfa010292 Carpinus fangiana HOM05D002746 ORTHO05D003037 1.6e-31 141.7 265 40.8
Manes.04G013601 Manihot esculenta HOM05D002746 ORTHO05D003037 1.6e-31 141.7 229 48.0
TWI79G0630 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 3.0e-30 137.5 193 46.6
TWI79G0510 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 6.6e-30 136.3 193 46.1
Eucgr.B03933 Eucalyptus grandis HOM05D002746 ORTHO05D003037 5.6e-29 133.3 206 43.7
QL01p015272 Quercus lobata HOM05D002746 ORTHO05D003037 6.2e-28 129.8 318 36.2
TWI75G0416 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 3.4e-26 124.0 200 43.0
Dinv29373 Davidia involucrata HOM05D002746 ORTHO05D003037 1.3e-25 122.1 228 39.9
Prupe.6G111900 Prunus persica HOM05D002746 ORTHO05D003037 2.9e-25 120.9 225 42.2
COL.COLO4_11106 Corchorus olitorius HOM05D002746 ORTHO05D003037 3.7e-25 120.6 200 41.5
Haze_23707 Corylus avellana HOM05D002746 ORTHO05D003037 3.7e-25 120.6 154 51.9
RcHm_v2.0_Chr5g0056951 Rosa chinensis HOM05D002746 ORTHO05D003037 4.9e-25 120.2 195 44.1
FAN25G1769 Fragaria x ananassa HOM05D002746 ORTHO05D003037 6.4e-25 119.8 200 43.5
Oeu007312.2 Olea europaea HOM05D002746 ORTHO05D003037 8.3e-25 119.4 195 41.5
Lj2A1009T38 Lonicera japonica HOM05D002746 ORTHO05D003037 2.4e-24 117.9 200 42.5
MD11G1147400 Malus domestica HOM05D002746 ORTHO05D003037 3.2e-24 117.5 231 40.3
MSTRG.12339 Avicennia marina HOM05D002746 ORTHO05D003037 4.1e-24 117.1 195 39.0
FAN11G2794 Fragaria x ananassa HOM05D002746 ORTHO05D003037 5.4e-24 116.7 200 42.5
MSTRG.17763 Avicennia marina HOM05D002746 ORTHO05D003037 1.2e-23 115.5 201 39.3
FAN21G0473 Fragaria x ananassa HOM05D002746 ORTHO05D003037 1.2e-23 115.5 201 43.3
vmacro14395 Vaccinium macrocarpon HOM05D002746 ORTHO05D003037 2.3e-22 111.3 259 36.3
Migut.N02561 Erythranthe guttata HOM05D002746 ORTHO05D003037 3.0e-22 110.9 259 34.4
TAR636G2586 Trochodendron aralioides HOM05D002746 ORTHO05D003037 6.6e-22 109.8 204 40.2
Actinidia20430 Actinidia chinensis HOM05D002746 ORTHO05D003037 8.6e-22 109.4 201 40.8
CAN.G546.40 Capsicum annuum HOM05D002746 ORTHO05D003037 1.9e-21 108.2 207 40.1
Nn2g13843 Nelumbo nucifera HOM05D002746 ORTHO05D003037 1.9e-21 108.2 205 41.0
Rhsim11G0027700 Rhododendron simsii HOM05D002746 ORTHO05D003037 2.5e-21 107.8 199 40.7
CiPaw.13G123400 Carya illinoinensis HOM05D002746 ORTHO05D003037 4.3e-21 107.1 234 37.6
Hund01439 Selenicereus undatus HOM05D002746 ORTHO05D003037 7.3e-21 106.3 160 47.5
TAR633G0282 Trochodendron aralioides HOM05D002746 ORTHO05D003037 7.3e-21 106.3 209 39.2
PGSC0003DMG400000414 Solanum tuberosum HOM05D002746 ORTHO05D003037 9.6e-21 105.9 155 45.8
MD03G1126800 Malus domestica HOM05D002746 ORTHO05D003037 1.2e-20 105.5 254 36.6
PGR119G0855 Punica granatum HOM05D002746 ORTHO05D003037 1.2e-20 105.5 237 40.1
EL10Ac9g22611 Beta vulgaris HOM05D002746 ORTHO05D003037 2.1e-20 104.8 206 41.3
FvH4_3g30760 Fragaria vesca HOM05D002746 ORTHO05D003037 2.1e-20 104.8 200 40.5
Sopen11g026100 Solanum pennellii HOM05D002746 ORTHO05D003037 4.7e-20 103.6 155 45.2
Cc01_g10360 Coffea canephora HOM05D002746 ORTHO05D003037 6.2e-20 103.2 153 42.5
Solyc11g066350.2 Solanum lycopersicum HOM05D002746 ORTHO05D003037 1.1e-19 102.4 155 44.5
Lsat_1_v5_gn_6_44580 Lactuca sativa HOM05D002746 ORTHO05D003037 1.4e-19 102.1 171 41.5
Nitab4.5_0000329g0090 Nicotiana tabacum HOM05D002746 ORTHO05D003037 3.1e-19 100.9 166 42.2
Dinv16215 Davidia involucrata HOM05D002746 ORTHO05D003037 4.0e-19 100.5 202 40.6
ClCG03G002610 Citrullus lanatus HOM05D002746 ORTHO05D003037 1.5e-18 98.6 195 36.9
FAN16G2248 Fragaria x ananassa HOM05D002746 ORTHO05D003037 1.5e-18 98.6 270 35.6
Actinidia03695 Actinidia chinensis HOM05D002746 ORTHO05D003037 2.0e-18 98.2 196 39.8
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.3e-17 95.5 153 43.8
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.3e-17 95.5 153 43.8
Nn6g35239 Nelumbo nucifera HOM05D002746 ORTHO05D003037 1.7e-17 95.1 152 42.8
ECA233G0311 Erigeron canadensis HOM05D002746 ORTHO05D003037 2.2e-17 94.7 159 44.7
Ah.01g003290 Amaranthus hybridus HOM05D002746 ORTHO05D003037 4.9e-17 93.6 160 41.2
SalBow3G3794 Salvia bowleyana HOM05D002746 ORTHO05D003037 4.9e-17 93.6 176 38.6
CsaV3_1G013340 Cucumis sativus L. HOM05D002746 ORTHO05D003037 1.9e-16 91.7 200 36.0
Lj3g0017780 Lotus japonicus HOM05D002746 ORTHO05D003037 1.9e-16 91.7 211 36.0
Glyma.12G080700 Glycine max HOM05D002746 ORTHO05D003037 9.3e-16 89.4 207 36.7
MELO3C004971.2 Cucumis melo HOM05D002746 ORTHO05D003037 1.2e-15 89.0 201 35.8
Lalb_Chr14g0374441 Lupinus albus HOM05D002746 ORTHO05D003037 3.5e-15 87.4 166 41.0
CAN.G694.42 Capsicum annuum HOM05D002746 ORTHO05D003037 6.0e-15 86.7 167 35.9
vmacro10253 Vaccinium macrocarpon HOM05D002746 ORTHO05D003037 1.0e-14 85.9 168 36.9
TAR369G0776 Trochodendron aralioides HOM05D002746 ORTHO05D003037 1.7e-14 85.1 253 30.8
Gohir.D05G293300 Gossypium hirsutum HOM05D002746 ORTHO05D003037 2.3e-14 84.7 192 35.4
Sed0007948 Sechium edule HOM05D002746 ORTHO05D003037 3.0e-14 84.3 274 31.0
Nitab4.5_0003880g0010 Nicotiana tabacum HOM05D002746 ORTHO05D003037 5.1e-14 83.6 133 43.6
Cpa.g.sc53.153 Carica papaya HOM05D002746 ORTHO05D003037 6.6e-14 83.2 258 31.4
HanXRQChr13g0396261 Helianthus annuus HOM05D002746 ORTHO05D003037 8.7e-14 82.8 167 38.3
GSVIVG01016210001 Vitis vinifera HOM05D002746 ORTHO05D003037 8.7e-14 82.8 287 32.4
AUR62029178 Chenopodium quinoa HOM05D002746 ORTHO05D003037 1.1e-13 82.4 247 34.4
AL5G23430 Arabidopsis lyrata HOM05D002746 ORTHO05D003037 1.5e-13 82.0 198 37.9
Rhsim09G0146600 Rhododendron simsii HOM05D002746 ORTHO05D003037 1.5e-13 82.0 161 39.8
MD01G1100300 Malus domestica HOM05D002746 ORTHO05D003037 1.9e-13 81.6 241 31.5
Aqoxy1G01110 Aquilegia oxysepala HOM05D002746 ORTHO05D003037 2.5e-13 81.3 195 33.3
Phvul.011G085600 Phaseolus vulgaris HOM05D002746 ORTHO05D003037 2.5e-13 81.3 160 37.5
Atru.chr12.881 Acer truncatum HOM05D002746 ORTHO05D003037 3.3e-13 80.9 229 34.5
Sp5g16280 Schrenkiella parvula HOM05D002746 ORTHO05D003037 3.3e-13 80.9 163 38.7
Gohir.A06G168700 Gossypium hirsutum HOM05D002746 ORTHO05D003037 4.3e-13 80.5 177 38.4
Psat0s1387g0120 Pisum sativum HOM05D002746 ORTHO05D003037 7.3e-13 79.7 197 36.0
Gohir.D06G176308 Gossypium hirsutum HOM05D002746 ORTHO05D003037 1.3e-12 79.0 193 35.8
Gorai.010G207300 Gossypium raimondii HOM05D002746 ORTHO05D003037 1.3e-12 79.0 157 39.5
Nitab4.5_0000096g0260 Nicotiana tabacum HOM05D002746 ORTHO05D003037 2.1e-12 78.2 205 31.7
arahy.Tifrunner.gnm1.ann1.PE2UWG Arachis hypogaea HOM05D002746 ORTHO05D003037 2.8e-12 77.8 233 33.5
Cc02_g10720 Coffea canephora HOM05D002746 ORTHO05D003037 2.8e-12 77.8 196 34.7
Dinv36375 Davidia involucrata HOM05D002746 ORTHO05D003037 2.8e-12 77.8 192 34.9
CsaV3_2G021060 Cucumis sativus L. HOM05D002746 ORTHO05D003037 4.8e-12 77.0 223 32.3
Manes.07G094800 Manihot esculenta HOM05D002746 ORTHO05D003037 4.8e-12 77.0 229 35.8
VMungo1127G1970 Vigna mungo HOM05D002746 ORTHO05D003037 4.8e-12 77.0 206 34.0
ClCG08G007860 Citrullus lanatus HOM05D002746 ORTHO05D003037 6.2e-12 76.6 528 25.2
Gohir.A05G292300 Gossypium hirsutum HOM05D002746 ORTHO05D003037 6.2e-12 76.6 200 34.5
Oeu046646.1 Olea europaea HOM05D002746 ORTHO05D003037 6.2e-12 76.6 281 29.9
CiPaw.02G170900 Carya illinoinensis HOM05D002746 ORTHO05D003037 8.1e-12 76.3 192 35.9
Oeu040984.1 Olea europaea HOM05D002746 ORTHO05D003037 8.1e-12 76.3 143 39.2
Potri.008G032600 Populus trichocarpa HOM05D002746 ORTHO05D003037 1.1e-11 75.9 214 36.0
Potri.010G229100 Populus trichocarpa HOM05D002746 ORTHO05D003037 1.1e-11 75.9 221 33.5
TWI63G0026 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 1.1e-11 75.9 187 35.3
Glyma.11G193300 Glycine max HOM05D002746 ORTHO05D003037 1.4e-11 75.5 207 35.3
QL08p053342 Quercus lobata HOM05D002746 ORTHO05D003037 1.4e-11 75.5 254 31.1
THA.LOC104816434 Tarenaya hassleriana HOM05D002746 ORTHO05D003037 1.4e-11 75.5 237 32.1
THA.LOC104826901 Tarenaya hassleriana HOM05D002746 ORTHO05D003037 1.4e-11 75.5 169 36.7
BolSC21t60282H Brassica oleracea HOM05D002746 ORTHO05D003037 1.8e-11 75.1 250 31.2
MD07G1167400 Malus domestica HOM05D002746 ORTHO05D003037 2.4e-11 74.7 254 31.1
Actinidia18545 Actinidia chinensis HOM05D002746 ORTHO05D003037 5.3e-11 73.6 159 35.2
Gorai.009G309800 Gossypium raimondii HOM05D002746 ORTHO05D003037 5.3e-11 73.6 200 33.0
TWI38G1635 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 5.3e-11 73.6 220 32.3
CiPaw.01G266600 Carya illinoinensis HOM05D002746 ORTHO05D003037 6.9e-11 73.2 249 30.9
DCAR_019068 Daucus carota HOM05D002746 ORTHO05D003037 6.9e-11 73.2 189 34.4
Sabra10G0177700 Salix brachista HOM05D002746 ORTHO05D003037 6.9e-11 73.2 199 34.2
Thecc.10G087200 Theobroma cacao HOM05D002746 ORTHO05D003037 6.9e-11 73.2 187 38.0
AT3G44960 Arabidopsis thaliana HOM05D002746 ORTHO05D003037 9.0e-11 72.8 259 30.1
C03p67460 Brassica napus HOM05D002746 ORTHO05D003037 1.2e-10 72.4 247 31.2
Sed0001530 Sechium edule HOM05D002746 ORTHO05D003037 1.2e-10 72.4 120 42.5
arahy.Tifrunner.gnm1.ann1.KXCL7T Arachis hypogaea HOM05D002746 ORTHO05D003037 1.5e-10 72.0 234 32.5
A10p31850 Brassica napus HOM05D002746 ORTHO05D003037 2.0e-10 71.6 200 30.5
PSO339G4755 Papaver somniferum HOM05D002746 ORTHO05D003037 2.6e-10 71.2 209 31.6
HanXRQChr13g0404481 Helianthus annuus HOM05D002746 ORTHO05D003037 4.4e-10 70.5 196 32.1
MELO3C019841.2 Cucumis melo HOM05D002746 ORTHO05D003037 5.8e-10 70.1 223 32.3
Medtr4g057530 Medicago truncatula HOM05D002746 ORTHO05D003037 5.8e-10 70.1 278 30.2
Prupe.2G206000 Prunus persica HOM05D002746 ORTHO05D003037 5.8e-10 70.1 288 28.8
CANSAT56G3275 Cannabis sativa HOM05D002746 ORTHO05D003037 7.6e-10 69.7 191 32.5
Nitab4.5_0002285g0050 Nicotiana tabacum HOM05D002746 ORTHO05D003037 9.9e-10 69.3 201 32.8
BcaB02g10742 Brassica carinata HOM05D002746 ORTHO05D003037 1.3e-09 68.9 277 29.2
BcaB04g21203 Brassica carinata HOM05D002746 ORTHO05D003037 1.7e-09 68.6 162 35.2
CSS0002034 Camellia sinensis var. sinensis HOM05D002746 ORTHO05D003037 2.2e-09 68.2 161 34.2
CDE04G0545 Ceratophyllum demersum HOM05D002746 ORTHO05D003037 2.2e-09 68.2 155 35.5
MBI13_g39327_MAGBIO Magnolia biondii HOM05D002746 ORTHO05D003037 2.2e-09 68.2 166 36.1
Nitab4.5_0002692g0020 Nicotiana tabacum HOM05D002746 ORTHO05D003037 2.2e-09 68.2 197 29.9
BcaC01g02244 Brassica carinata HOM05D002746 ORTHO05D003037 2.9e-09 67.8 236 30.5
Hma1.2p1_0779F.1_g216690 Hydrangea macrophylla HOM05D002746 ORTHO05D003037 2.9e-09 67.8 222 30.6
PSO063G2563 Papaver somniferum HOM05D002746 ORTHO05D003037 3.8e-09 67.4 178 32.6
vmacro10244 Vaccinium macrocarpon HOM05D002746 ORTHO05D003037 3.8e-09 67.4 119 39.5
Carub.0005s1069 Capsella rubella HOM05D002746 ORTHO05D003037 4.9e-09 67.0 164 36.0
BcaB04g21205 Brassica carinata HOM05D002746 ORTHO05D003037 1.1e-08 65.9 187 31.6
MSTRG.8123 Avicennia marina HOM05D002746 ORTHO05D003037 1.9e-08 65.1 189 32.3
BolC9t59996H Brassica oleracea HOM05D002746 ORTHO05D003037 1.9e-08 65.1 207 29.0
BraA10t45230Z Brassica rapa HOM05D002746 ORTHO05D003037 2.4e-08 64.7 242 28.9
Haze_23708 Corylus avellana HOM05D002746 ORTHO05D003037 4.2e-08 63.9 43 74.4
ECA232G1997 Erigeron canadensis HOM05D002746 ORTHO05D003037 4.2e-08 63.9 195 29.7
C09p72570 Brassica napus HOM05D002746 ORTHO05D003037 5.4e-08 63.5 161 36.6
DCAR_006399 Daucus carota HOM05D002746 ORTHO05D003037 5.4e-08 63.5 158 35.4
Ca_02470_v3 Cicer arietinum L. HOM05D002746 ORTHO05D003037 7.1e-08 63.2 119 37.8
Ca_30123_v3 Cicer arietinum L. HOM05D002746 ORTHO05D003037 7.1e-08 63.2 119 37.8
CSS0033737 Camellia sinensis var. sinensis HOM05D002746 ORTHO05D003037 9.3e-08 62.8 196 28.1
Haze_16759 Corylus avellana HOM05D002746 ORTHO05D003037 9.3e-08 62.8 202 31.7
ECA233G2466 Erigeron canadensis HOM05D000013 ORTHO05D000011 9.3e-08 62.8 260 28.5
PGR142G3471 Punica granatum HOM05D002746 ORTHO05D003037 9.3e-08 62.8 227 30.4
Actinidia06732 Actinidia chinensis HOM05D002746 ORTHO05D003037 1.2e-07 62.4 161 32.9
MSTRG.9139 Avicennia marina HOM05D002746 ORTHO05D003037 1.2e-07 62.4 241 29.9
Sp6g38420 Schrenkiella parvula HOM05D002746 ORTHO05D003037 1.2e-07 62.4 237 30.0
Aa31LG3G3050 Aethionema arabicum HOM05D002746 ORTHO05D003037 2.1e-07 61.6 294 26.2
Nitab4.5_0004987g0050 Nicotiana tabacum HOM05D002746 ORTHO05D003037 2.7e-07 61.2 166 31.3
Sc20g0001570 Simmondsia chinensis HOM05D002746 ORTHO05D003037 3.5e-07 60.8 229 30.1
TPR.G36829 Trifolium pratense HOM05D002746 ORTHO05D003037 6.0e-07 60.1 249 30.1
Migut.F01699 Erythranthe guttata HOM05D002746 ORTHO05D003037 7.9e-07 59.7 186 32.3
BcaC06g32135 Brassica carinata HOM05D002746 ORTHO05D027081 1.0e-06 59.3 157 33.8
BolC1t05396H Brassica oleracea HOM05D002746 ORTHO05D003037 1.3e-06 58.9 158 32.3
SGA_v2.0_scaffold2G01341 Striga asiatica HOM05D002746 ORTHO05D003037 1.3e-06 58.9 191 31.9
Lsat_1_v5_gn_9_71621 Lactuca sativa HOM05D002746 ORTHO05D003037 1.7e-06 58.5 202 30.2
CAN.G459.30 Capsicum annuum HOM05D002746 ORTHO05D003037 2.3e-06 58.2 158 29.1
Carub.0006s0327 Capsella rubella HOM05D002746 ORTHO05D003037 3.0e-06 57.8 200 30.0
SalBow6G2132 Salvia bowleyana HOM05D002746 ORTHO05D003037 3.0e-06 57.8 138 35.5
AT5G04320 Arabidopsis thaliana HOM05D002746 ORTHO05D003037 3.9e-06 57.4 494 23.9
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 3.9e-06 57.4 89 44.9
BcaC09g48090 Brassica carinata HOM05D002746 ORTHO05D003037 5.1e-06 57.0 156 34.0
Thhalv10020876m.g Eutrema salsugineum HOM05D002746 ORTHO05D003037 5.1e-06 57.0 151 33.8
Sopen11g003940 Solanum pennellii HOM05D002746 ORTHO05D003037 5.1e-06 57.0 158 29.7
SGA_v2.0_scaffold51G18717 Striga asiatica HOM05D002746 ORTHO05D003037 6.6e-06 56.6 189 33.9


User provided reference genes

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