Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.4e-87 326.2 161 100.0
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.9e-81 305.8 162 95.7
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 8.7e-58 227.3 163 69.3
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 1.9e-57 226.1 162 69.8
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.8e-55 219.5 160 66.2
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 9.0e-55 217.2 156 67.9
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 1.3e-53 213.4 157 66.9
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 2.2e-53 212.6 159 67.3
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 4.9e-53 211.5 156 65.4
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 1.6e-51 206.5 171 60.8
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 2.1e-51 206.1 163 62.0
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 3.5e-51 205.3 158 64.6
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 3.5e-51 205.3 157 63.7
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 1.3e-50 203.4 157 62.4
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 1.8e-50 203.0 157 61.8
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.8e-50 203.0 158 60.1
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 2.3e-50 202.6 169 60.4
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 3.0e-50 202.2 158 60.8
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 3.9e-50 201.8 157 62.4
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.1e-49 200.3 170 60.6
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 4.3e-49 198.4 160 63.1
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 7.4e-49 197.6 155 61.3
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 7.4e-49 197.6 156 59.6
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.3e-48 196.8 156 63.5
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 1.6e-48 196.4 155 60.6
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 2.8e-48 195.7 156 62.8
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 2.8e-48 195.7 159 61.6
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 4.8e-48 194.9 156 62.2
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 6.2e-48 194.5 157 63.7
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 1.1e-47 193.7 156 62.8
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 1.4e-47 193.4 154 61.7
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 2.4e-47 192.6 155 60.6
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 2.4e-47 192.6 162 59.9
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 3.1e-47 192.2 163 60.1
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 5.3e-47 191.4 153 60.1
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 9.0e-47 190.7 153 60.1
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 2.0e-46 189.5 150 60.7
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 2.0e-46 189.5 157 61.8
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 5.8e-46 188.0 172 54.7
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 5.8e-46 188.0 166 56.6
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 1.7e-45 186.4 153 60.1
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 2.9e-45 185.7 153 58.8
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 4.9e-45 184.9 187 51.3
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 6.4e-45 184.5 170 54.1
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.4e-44 183.3 169 55.0
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 7.1e-44 181.0 162 58.0
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 9.3e-44 180.6 151 60.3
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 1.3e-42 176.8 152 61.8
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.3e-42 176.8 159 56.0
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 3.0e-42 175.6 201 50.7
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 5.1e-42 174.9 151 56.3
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 6.7e-42 174.5 163 55.2
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 1.9e-41 172.9 158 56.3
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 1.9e-41 172.9 165 56.4
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 2.5e-41 172.6 161 54.7
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 3.3e-41 172.2 162 54.3
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 4.3e-41 171.8 150 57.3
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 4.3e-41 171.8 160 54.4
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 3.7e-40 168.7 159 51.6
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 4.8e-40 168.3 152 55.9
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 3.1e-39 165.6 154 54.5
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 3.1e-39 165.6 154 54.5
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 3.1e-39 165.6 158 53.2
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 4.0e-39 165.2 149 55.7
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 4.0e-39 165.2 162 51.9
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 4.0e-39 165.2 162 51.9
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 5.3e-39 164.9 162 51.9
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 5.3e-39 164.9 151 55.0
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 6.9e-39 164.5 153 53.6
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 9.0e-39 164.1 149 55.7
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 4.5e-38 161.8 151 53.6
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 7.6e-38 161.0 153 52.9
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.0e-37 160.6 167 50.3
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 2.9e-37 159.1 146 54.8
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 3.8e-37 158.7 154 52.6
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 6.5e-37 157.9 156 53.8
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.5e-36 156.0 162 50.6
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 5.5e-36 154.8 150 54.0
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 2.1e-35 152.9 126 57.1
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 3.5e-35 152.1 145 51.7
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 3.0e-34 149.1 154 51.9
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 3.0e-34 149.1 158 50.0
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 8.7e-34 147.5 155 49.7
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 1.1e-33 147.1 129 57.4
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 9.7e-33 144.1 151 49.0
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 4.1e-31 138.7 151 47.0
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 5.9e-30 134.8 135 50.4
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.3e-29 133.7 151 45.7
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 2.5e-28 129.4 96 62.5
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 2.3e-26 122.9 118 55.1
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 3.9e-26 122.1 98 57.1
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 1.5e-25 120.2 151 42.4
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 1.2e-22 110.5 112 55.4
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 1.2e-22 110.5 100 55.0
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 3.4e-22 109.0 84 64.3
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 2.9e-21 105.9 91 54.9
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 6.1e-19 98.2 112 48.2
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 7.4e-17 91.3 130 36.2
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.7e-16 90.1 68 63.2
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 5.9e-14 81.6 96 42.7
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.1e-11 73.2 45 71.1
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 9.7e-09 64.3 46 60.9
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 1.7e-08 63.5 36 75.0


User provided reference genes

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