Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0145100 Salix brachista HOM05D007861 ORTHO05D007271 5.7e-42 173.7 81 100.0
Potri.004G213900 Populus trichocarpa HOM05D007861 ORTHO05D007271 1.6e-28 129.0 77 81.8
Sabra09G0004800 Salix brachista HOM05D007861 ORTHO05D007271 8.9e-27 123.2 75 78.7
Potri.009G008300 Populus trichocarpa HOM05D007861 ORTHO05D007271 5.4e-24 114.0 80 71.2
Manes.11G150200 Manihot esculenta HOM05D007861 ORTHO05D007271 4.9e-17 90.9 74 60.8
Cfa010349 Carpinus fangiana HOM05D007861 ORTHO05D007271 2.5e-13 78.6 66 60.6
Haze_23757 Corylus avellana HOM05D007861 ORTHO05D007271 9.5e-13 76.6 66 59.1
Atru.chr3.3557 Acer truncatum HOM05D007861 ORTHO05D007271 1.2e-12 76.3 83 54.2
CiPaw.13G118000 Carya illinoinensis HOM05D007861 ORTHO05D007271 1.6e-12 75.9 72 54.2
FvH4_3g31180 Fragaria vesca HOM05D007861 ORTHO05D007271 3.6e-12 74.7 85 51.8
FAN11G3777 Fragaria x ananassa HOM05D007861 ORTHO05D007271 3.6e-12 74.7 85 51.8
FAN25G1997 Fragaria x ananassa HOM05D007861 ORTHO05D007271 3.6e-12 74.7 85 51.8
Ciclev10029681m.g Citrus clementina HOM05D007861 ORTHO05D007271 8.1e-12 73.6 74 56.8
FAN21G2212 Fragaria x ananassa HOM05D007861 ORTHO05D007271 1.1e-11 73.2 85 51.8
Sed0017526 Sechium edule HOM05D007861 ORTHO05D007271 1.1e-11 73.2 75 52.0
Manes.04G015900 Manihot esculenta HOM05D007861 ORTHO05D007271 1.4e-11 72.8 63 57.1
TPR.G6167 Trifolium pratense HOM05D007861 ORTHO05D007271 1.8e-11 72.4 90 48.9
Medtr4g057830 Medicago truncatula HOM05D007861 ORTHO05D007271 2.3e-11 72.0 82 53.7
FAN16G3504 Fragaria x ananassa HOM05D007861 ORTHO05D007271 3.1e-11 71.6 85 51.8
RcHm_v2.0_Chr5g0057831 Rosa chinensis HOM05D007861 ORTHO05D007271 4.0e-11 71.2 69 55.1
ClCG02G021400 Citrullus lanatus HOM05D007861 ORTHO05D007271 5.2e-11 70.9 75 50.7
Prupe.6G107700 Prunus persica HOM05D007861 ORTHO05D007271 5.2e-11 70.9 85 51.8
Lalb_Chr14g0374511 Lupinus albus HOM05D007861 ORTHO05D007271 1.2e-10 69.7 86 53.5
DCAR_018786 Daucus carota HOM05D007861 ORTHO05D007271 2.0e-10 68.9 68 55.9
Lalb_Chr24g0394821 Lupinus albus HOM05D007861 ORTHO05D007271 2.6e-10 68.6 86 53.5
arahy.Tifrunner.gnm1.ann1.ALS1H8 Arachis hypogaea HOM05D007861 ORTHO05D007271 4.4e-10 67.8 71 56.3
Cpa.g.sc65.32 Carica papaya HOM05D007861 ORTHO05D007271 7.5e-10 67.0 70 61.4
CiPaw.14G086500 Carya illinoinensis HOM05D007861 ORTHO05D007271 1.3e-09 66.2 67 53.7
Nn2g13767 Nelumbo nucifera HOM05D007861 ORTHO05D007271 1.3e-09 66.2 67 53.7
TAR633G0087 Trochodendron aralioides HOM05D007861 ORTHO05D007271 1.3e-09 66.2 77 50.6
Glyma.12G177000 Glycine max HOM05D007861 ORTHO05D007271 1.7e-09 65.9 85 50.6
TPR.G11489 Trifolium pratense HOM05D007861 ORTHO05D007271 2.9e-09 65.1 79 46.8
COL.COLO4_34705 Corchorus olitorius HOM05D007861 ORTHO05D007271 4.9e-09 64.3 69 56.5
Glyma.13G323700 Glycine max HOM05D007861 ORTHO05D007271 4.9e-09 64.3 85 50.6
Migut.F01962 Erythranthe guttata HOM05D007861 ORTHO05D007271 6.4e-09 63.9 50 54.0
Medtr2g095310 Medicago truncatula HOM05D007861 ORTHO05D007271 6.4e-09 63.9 84 48.8
Lsat_1_v5_gn_6_43600 Lactuca sativa HOM05D007861 ORTHO05D007271 8.3e-09 63.5 59 50.8
MELO3C026916.2 Cucumis melo HOM05D007861 ORTHO05D007271 1.1e-08 63.2 78 47.4
Hma1.2p1_0569F.1_g180260 Hydrangea macrophylla HOM05D007861 ORTHO05D007271 1.4e-08 62.8 58 51.7
CsaV3_6G014180 Cucumis sativus L. HOM05D007861 ORTHO05D007271 1.9e-08 62.4 77 48.1
Lj3g0021425 Lotus japonicus HOM05D007861 ORTHO05D007271 1.9e-08 62.4 67 53.7
Phvul.005G132100 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 3.2e-08 61.6 80 48.8
Sopen06g031390 Solanum pennellii HOM05D039995 ORTHO05D007271 5.4e-08 60.8 65 49.2
Thecc.09G347700 Theobroma cacao HOM05D007861 ORTHO05D007271 5.4e-08 60.8 67 52.2
MSTRG.21100 Avicennia marina HOM05D007861 ORTHO05D007271 9.2e-08 60.1 55 52.7
Thhalv10017662m.g Eutrema salsugineum HOM05D014739 ORTHO05D007271 9.2e-08 60.1 66 51.5
Lalb_Chr03g0027611 Lupinus albus HOM05D007861 ORTHO05D007271 9.2e-08 60.1 66 51.5
Glyma.11G195000 Glycine max HOM05D007861 ORTHO05D007271 1.2e-07 59.7 67 53.7
Lj3g0027314 Lotus japonicus HOM05D007861 ORTHO05D007271 1.2e-07 59.7 84 46.4
Sed0005749 Sechium edule HOM05D007861 ORTHO05D007271 1.2e-07 59.7 80 45.0
Nn2g11569 Nelumbo nucifera HOM05D007861 ORTHO05D007271 1.6e-07 59.3 67 49.3
Phvul.011G083700 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 1.6e-07 59.3 67 53.7
Glyma.12G079100 Glycine max HOM05D007861 ORTHO05D007271 2.7e-07 58.5 67 52.2
Carub.0004s0882 Capsella rubella HOM05D014739 ORTHO05D007271 3.5e-07 58.2 70 47.1
BraA04t17695Z Brassica rapa HOM05D014739 ORTHO05D007271 4.6e-07 57.8 65 47.7
ECA233G4124 Erigeron canadensis HOM05D007861 ORTHO05D007271 4.6e-07 57.8 63 49.2
VMungo1127G1395 Vigna mungo HOM05D007861 ORTHO05D007271 6.0e-07 57.4 67 53.7
Gohir.D08G217100 Gossypium hirsutum HOM05D007861 ORTHO05D007271 7.8e-07 57.0 83 48.2
Aqoxy1G01166 Aquilegia oxysepala HOM05D007861 ORTHO05D007271 1.0e-06 56.6 60 50.0
Rhsim03G0116500 Rhododendron simsii HOM05D009695 ORTHO05D007271 1.0e-06 56.6 53 52.8
Lalb_Chr01g0004491 Lupinus albus HOM05D007861 ORTHO05D007271 1.3e-06 56.2 66 48.5
PGSC0003DMG400019683 Solanum tuberosum HOM05D007861 ORTHO05D007271 1.3e-06 56.2 50 52.0
Gohir.A05G106400 Gossypium hirsutum HOM05D007861 ORTHO05D007271 1.7e-06 55.8 68 50.0
Gohir.A08G200000 Gossypium hirsutum HOM05D007861 ORTHO05D007271 1.7e-06 55.8 69 50.7
Gorai.004G230800 Gossypium raimondii HOM05D007861 ORTHO05D007271 1.7e-06 55.8 69 50.7
Sp4g10850 Schrenkiella parvula HOM05D014739 ORTHO05D007271 1.7e-06 55.8 65 47.7
TPR.G10289 Trifolium pratense HOM05D007861 ORTHO05D007271 1.7e-06 55.8 56 44.6
BcaB06g28183 Brassica carinata HOM05D014739 ORTHO05D007271 2.3e-06 55.5 65 46.2
BcaC02g08213 Brassica carinata HOM05D014739 ORTHO05D007271 2.3e-06 55.5 65 46.2
A04p21280 Brassica napus HOM05D014739 ORTHO05D007271 2.3e-06 55.5 65 46.2
BolC4t27246H Brassica oleracea HOM05D014739 ORTHO05D007271 2.3e-06 55.5 65 46.2
C04p57110 Brassica napus HOM05D014739 ORTHO05D007271 3.0e-06 55.1 65 46.2
Cfa001682 Carpinus fangiana HOM05D009695 ORTHO05D007271 5.1e-06 54.3 51 49.0
Solyc11g069730.1 Solanum lycopersicum HOM05D007861 ORTHO05D007271 5.1e-06 54.3 81 42.0
Gohir.D05G106401 Gossypium hirsutum HOM05D007861 ORTHO05D007271 6.6e-06 53.9 68 48.5
Gorai.009G110500 Gossypium raimondii HOM05D007861 ORTHO05D007271 6.6e-06 53.9 68 48.5
Phvul.007G098200 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 6.6e-06 53.9 51 45.1
Eucgr.J00896 Eucalyptus grandis HOM05D007861 ORTHO05D007271 8.6e-06 53.5 61 47.5


User provided reference genes

Program Settings