Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 7.3e-112 407.1 192 100.0
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 9.6e-96 353.6 191 88.0
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 5.1e-81 304.7 190 77.4
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 1.3e-65 253.4 198 63.1
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 9.7e-64 247.3 202 61.4
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 1.1e-62 243.8 210 60.0
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.1e-59 233.8 205 61.0
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 9.4e-59 230.7 199 61.8
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.2e-58 230.3 199 61.8
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.6e-58 229.9 207 59.9
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.6e-58 228.8 206 59.7
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 4.6e-58 228.4 204 56.9
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 7.9e-58 227.6 199 60.8
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.0e-57 227.3 206 59.2
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 1.0e-57 227.3 203 60.6
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 1.4e-57 226.9 208 56.2
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 1.4e-57 226.9 204 57.4
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 1.4e-57 226.9 200 61.5
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 1.1e-56 223.8 204 56.9
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 1.1e-56 223.8 204 56.9
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.1e-56 223.8 199 60.3
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 1.1e-56 223.8 205 60.0
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 1.3e-55 220.3 204 55.9
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 2.2e-55 219.5 180 60.0
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 4.8e-55 218.4 197 57.4
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 1.1e-54 217.2 225 52.4
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 2.4e-54 216.1 204 56.9
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 3.1e-54 215.7 195 57.9
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 2.0e-53 213.0 191 57.6
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 3.4e-53 212.2 190 56.8
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 4.5e-53 211.8 192 58.3
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 1.3e-52 210.3 217 50.7
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 5.0e-52 208.4 199 54.8
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 1.9e-51 206.5 193 56.5
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 2.5e-51 206.1 182 56.0
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 9.4e-51 204.1 197 55.8
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 1.2e-50 203.8 209 54.5
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.6e-50 202.2 208 51.9
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 3.6e-50 202.2 202 55.4
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 6.1e-50 201.4 211 52.6
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 7.9e-50 201.1 199 51.8
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 1.0e-49 200.7 209 53.1
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 4.4e-48 195.3 196 54.1
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 6.3e-47 191.4 201 54.7
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 1.4e-46 190.3 178 57.3
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 1.8e-46 189.9 183 53.6
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 2.9e-44 182.6 205 47.8
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 3.8e-44 182.2 202 49.5
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 5.0e-44 181.8 175 54.3
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 1.6e-42 176.8 190 50.0
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.0e-41 174.1 196 49.0
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 3.9e-41 172.2 193 49.7
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 5.2e-41 171.8 186 52.2
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 1.8e-38 163.3 190 46.3
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 3.1e-38 162.5 187 47.1
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 2.7e-34 149.4 234 41.9
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 8.0e-34 147.9 210 45.2
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 4.8e-31 138.7 109 60.6
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 2.4e-30 136.3 119 58.8
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 3.1e-30 136.0 172 47.7
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 4.1e-30 135.6 185 43.8
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.7e-28 130.2 173 44.5
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 6.1e-26 121.7 181 40.3
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 2.3e-25 119.8 164 43.9
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 3.0e-25 119.4 114 50.0
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 1.3e-23 114.0 181 37.0
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 3.7e-23 112.5 135 49.6
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 2.4e-22 109.8 214 34.6
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 1.2e-21 107.5 116 45.7
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 5.9e-21 105.1 95 55.8
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 7.7e-21 104.8 112 48.2
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.0e-20 104.4 103 52.4
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 9.5e-19 97.8 90 54.4
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.0e-17 94.4 96 53.1
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.2e-16 90.9 94 52.1
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.7e-15 87.0 93 49.5
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 2.2e-15 86.7 95 51.6
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.9e-13 78.6 80 52.5
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 1.9e-11 73.6 70 58.6


User provided reference genes

Program Settings