Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0136300 Salix brachista HOM05D004934 ORTHO05D005924 5.5e-60 234.2 125 100.0
Potri.004G201700 Populus trichocarpa HOM05D004934 ORTHO05D005924 8.5e-53 210.3 125 92.0
Potri.009G163100 Populus trichocarpa HOM05D004934 ORTHO05D005924 8.8e-50 200.3 125 84.0
Sabra09G0127300 Salix brachista HOM05D004934 ORTHO05D005924 3.3e-49 198.4 123 83.7
Manes.04G003100 Manihot esculenta HOM05D004934 ORTHO05D005924 3.5e-38 161.8 125 74.4
Thecc.09G281300 Theobroma cacao HOM05D004934 ORTHO05D005924 4.0e-34 148.3 120 70.8
Cfa010007 Carpinus fangiana HOM05D004934 ORTHO05D005924 8.9e-34 147.1 120 67.5
TWI31G0143 Tripterygium wilfordii HOM05D004934 ORTHO05D005924 1.5e-33 146.4 125 68.0
THA.LOC104800543 Tarenaya hassleriana HOM05D004934 ORTHO05D005924 7.5e-33 144.1 125 64.8
Hund18761 Selenicereus undatus HOM05D004934 ORTHO05D005924 9.8e-33 143.7 125 68.0
PGR102G3359 Punica granatum HOM05D004934 ORTHO05D005924 4.9e-32 141.4 125 63.2
ECA233G4139 Erigeron canadensis HOM05D004934 ORTHO05D005924 1.8e-31 139.4 121 66.9
QL01p012137 Quercus lobata HOM05D004934 ORTHO05D005924 3.1e-31 138.7 120 65.8
Gohir.D08G015900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 4.1e-31 138.3 120 69.2
Gorai.004G010200 Gossypium raimondii HOM05D004934 ORTHO05D005924 7.0e-31 137.5 120 68.3
ATR0609G030 Amborella trichopoda HOM05D004934 ORTHO05D005924 1.2e-30 136.7 125 64.0
Dinv42546 Davidia involucrata HOM05D004934 ORTHO05D005924 1.6e-30 136.3 125 67.2
Dinv22836 Davidia involucrata HOM05D004934 ORTHO05D005924 2.0e-30 136.0 125 68.8
Duzib168G1921 Durio zibethinus HOM05D004934 ORTHO05D005924 2.7e-30 135.6 120 68.3
MD11G1166100 Malus domestica HOM05D004934 ORTHO05D005924 2.7e-30 135.6 111 67.6
Hma1.2p1_0587F.1_g184270 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 3.5e-30 135.2 111 67.6
Sed0020870 Sechium edule HOM05D004934 ORTHO05D005924 4.5e-30 134.8 118 68.6
ClCG01G011970 Citrullus lanatus HOM05D004934 ORTHO05D005924 5.9e-30 134.4 108 73.1
Ciclev10029605m.g Citrus clementina HOM05D004934 ORTHO05D005924 1.7e-29 132.9 125 65.6
EL10Ac7g15830 Beta vulgaris HOM05D004934 ORTHO05D005924 2.3e-29 132.5 120 60.8
FvH4_5g26820 Fragaria vesca HOM05D004934 ORTHO05D005924 2.3e-29 132.5 111 67.6
FAN04G2654 Fragaria x ananassa HOM05D004934 ORTHO05D005924 2.3e-29 132.5 111 67.6
Gohir.A08G005600 Gossypium hirsutum HOM05D004934 ORTHO05D005924 2.9e-29 132.1 120 67.5
Nn2g14177 Nelumbo nucifera HOM05D004934 ORTHO05D005924 2.9e-29 132.1 125 64.8
CsaV3_1G014900 Cucumis sativus L. HOM05D004934 ORTHO05D005924 3.8e-29 131.7 111 69.4
TPR.G17236 Trifolium pratense HOM05D004934 ORTHO05D005924 3.8e-29 131.7 126 61.9
CANSAT54G1198 Cannabis sativa HOM05D004934 ORTHO05D005924 5.0e-29 131.3 129 59.7
Prupe.6G131900 Prunus persica HOM05D004934 ORTHO05D005924 5.0e-29 131.3 120 63.3
CiPaw.14G099500 Carya illinoinensis HOM05D004934 ORTHO05D005924 8.6e-29 130.6 111 66.7
Cc01_g09040 Coffea canephora HOM05D004934 ORTHO05D005924 8.6e-29 130.6 112 68.8
FAN13G2036 Fragaria x ananassa HOM05D004934 ORTHO05D005924 8.6e-29 130.6 111 66.7
vmacro14353 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 8.6e-29 130.6 125 61.6
Peaxi162Scf00040g00023 Petunia axillaris HOM05D004934 ORTHO05D005924 1.5e-28 129.8 111 66.7
Gohir.D09G095900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 3.3e-28 128.6 121 63.6
Sc06g0008770 Simmondsia chinensis HOM05D004934 ORTHO05D005924 3.3e-28 128.6 125 61.6
Nitab4.5_0002914g0100 Nicotiana tabacum HOM05D004934 ORTHO05D005924 4.3e-28 128.3 112 67.9
TAR633G0561 Trochodendron aralioides HOM05D004934 ORTHO05D005924 4.3e-28 128.3 125 63.2
Atru.chr3.3218 Acer truncatum HOM05D004934 ORTHO05D005924 5.6e-28 127.9 125 64.8
Gohir.A09G096200 Gossypium hirsutum HOM05D004934 ORTHO05D005924 5.6e-28 127.9 121 64.5
Lalb_Chr03g0028151 Lupinus albus HOM05D004934 ORTHO05D005924 5.6e-28 127.9 126 60.3
Medtr4g052910 Medicago truncatula HOM05D004934 ORTHO05D005924 5.6e-28 127.9 126 60.3
Ca_19413_v3 Cicer arietinum L. HOM05D004934 ORTHO05D005924 9.5e-28 127.1 126 61.9
Actinidia35468 Actinidia chinensis HOM05D004934 ORTHO05D005924 1.2e-27 126.7 126 61.9
AUR62036196 Chenopodium quinoa HOM05D004934 ORTHO05D005924 1.6e-27 126.3 120 58.3
Glyma.12G090500 Glycine max HOM05D004934 ORTHO05D005924 1.6e-27 126.3 126 63.5
AUR62009749 Chenopodium quinoa HOM05D004934 ORTHO05D005924 2.8e-27 125.6 111 62.2
RcHm_v2.0_Chr5g0045641 Rosa chinensis HOM05D004934 ORTHO05D005924 2.8e-27 125.6 125 60.0
PGSC0003DMG400026356 Solanum tuberosum HOM05D004934 ORTHO05D005924 2.8e-27 125.6 111 65.8
GSVIVG01036114001 Vitis vinifera HOM05D004934 ORTHO05D005924 2.8e-27 125.6 120 61.7
MSTRG.17705 Avicennia marina HOM05D004934 ORTHO05D005924 3.6e-27 125.2 127 60.6
MSTRG.12371 Avicennia marina HOM05D004934 ORTHO05D005924 4.7e-27 124.8 127 60.6
Eucgr.B03844 Eucalyptus grandis HOM05D004934 ORTHO05D005924 4.7e-27 124.8 125 62.4
Nitab4.5_0012586g0010 Nicotiana tabacum HOM05D004934 ORTHO05D005924 6.1e-27 124.4 111 63.1
unitig_27.g25034 Utricularia gibba HOM05D004934 ORTHO05D005924 1.0e-26 123.6 121 59.5
arahy.Tifrunner.gnm1.ann1.Q13MWU Arachis hypogaea HOM05D004934 ORTHO05D005924 1.8e-26 122.9 126 61.9
arahy.Tifrunner.gnm1.ann1.Q2H7V9 Arachis hypogaea HOM05D004934 ORTHO05D005924 1.8e-26 122.9 126 61.9
Lj3g0027260 Lotus japonicus HOM05D004934 ORTHO05D005924 1.8e-26 122.9 126 60.3
Nitab4.5_0000755g0070 Nicotiana tabacum HOM05D004934 ORTHO05D005924 1.8e-26 122.9 111 63.1
Solyc11g068510.2 Solanum lycopersicum HOM05D004934 ORTHO05D005924 2.3e-26 122.5 111 64.9
Sopen11g027220 Solanum pennellii HOM05D004934 ORTHO05D005924 2.3e-26 122.5 111 64.9
Lalb_Chr01g0004881 Lupinus albus HOM05D004934 ORTHO05D005924 4.0e-26 121.7 126 60.3
Aqoxy4G02760 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 5.2e-26 121.3 125 60.8
Duzib170G0221 Durio zibethinus HOM05D004934 ORTHO05D005924 6.8e-26 120.9 120 62.5
Glyma.11G182300 Glycine max HOM05D004934 ORTHO05D005924 6.8e-26 120.9 126 62.7
MD03G1147400 Malus domestica HOM05D004934 ORTHO05D005924 8.9e-26 120.6 111 64.0
Carub.0004s0847 Capsella rubella HOM05D004934 ORTHO05D005924 1.5e-25 119.8 125 59.2
Phvul.011G095100 Phaseolus vulgaris HOM05D004934 ORTHO05D005924 2.0e-25 119.4 126 59.5
VMungo1127G1656 Vigna mungo HOM05D004934 ORTHO05D005924 2.0e-25 119.4 126 60.3
Lsat_1_v5_gn_6_38900 Lactuca sativa HOM05D004934 ORTHO05D005924 2.6e-25 119.0 117 65.0
Oeu031471.1 Olea europaea HOM05D004934 ORTHO05D005924 2.6e-25 119.0 127 57.5
Zm00001eb369670 Zea mays HOM05D004934 ORTHO05D005924 5.8e-25 117.9 125 58.4
Nitab4.5_0000227g0280 Nicotiana tabacum HOM05D004934 ORTHO05D005924 9.8e-25 117.1 112 65.2
CAN.G1524.5 Capsicum annuum HOM05D004934 ORTHO05D005924 1.3e-24 116.7 113 61.9
Migut.N02487 Erythranthe guttata HOM05D004934 ORTHO05D005924 2.2e-24 115.9 125 60.0
Aa31LG5G8260 Aethionema arabicum HOM05D004934 ORTHO05D005924 3.7e-24 115.2 125 56.8
CSS0038235 Camellia sinensis var. sinensis HOM05D004934 ORTHO05D005924 3.7e-24 115.2 110 63.6
CARHR120400 Cardamine hirsuta HOM05D004934 ORTHO05D005924 3.7e-24 115.2 125 53.6
Zm00001eb151060 Zea mays HOM05D004934 ORTHO05D005924 8.3e-24 114.0 125 58.4
Psat7g187720 Pisum sativum HOM05D004934 ORTHO05D005924 3.2e-23 112.1 126 56.3
AL4G22570 Arabidopsis lyrata HOM05D004934 ORTHO05D005924 4.1e-23 111.7 126 56.3
HanXRQChr13g0397481 Helianthus annuus HOM05D004934 ORTHO05D005924 5.4e-23 111.3 112 59.8
RcHm_v2.0_Chr5g0046361 Rosa chinensis HOM05D004934 ORTHO05D005924 5.4e-23 111.3 133 54.1
Thhalv10017451m.g Eutrema salsugineum HOM05D004934 ORTHO05D005924 9.2e-23 110.5 125 58.4
BcaC02g08235 Brassica carinata HOM05D004934 ORTHO05D005924 3.5e-22 108.6 126 61.1
C04p56900 Brassica napus HOM05D004934 ORTHO05D005924 3.5e-22 108.6 126 61.1
BolC4t27225H Brassica oleracea HOM05D004934 ORTHO05D005924 3.5e-22 108.6 126 61.1
Sp4g10520 Schrenkiella parvula HOM05D004934 ORTHO05D005924 6.0e-22 107.8 126 55.6
AT2G27730 Arabidopsis thaliana HOM05D004934 ORTHO05D005924 1.3e-21 106.7 125 54.4
BcaB06g28164 Brassica carinata HOM05D004934 ORTHO05D005924 1.3e-21 106.7 121 57.9
A04p21090 Brassica napus HOM05D004934 ORTHO05D005924 1.7e-21 106.3 112 59.8
A07p18350 Brassica napus HOM05D004934 ORTHO05D005924 1.7e-21 106.3 113 60.2
BraA04t17678Z Brassica rapa HOM05D004934 ORTHO05D005924 1.7e-21 106.3 112 59.8
TAR636G0935 Trochodendron aralioides HOM05D004934 ORTHO05D005924 3.0e-21 105.5 113 57.5
BraA07t29551Z Brassica rapa HOM05D004934 ORTHO05D005924 1.9e-20 102.8 112 58.0
BcaC02g10898 Brassica carinata HOM05D004934 ORTHO05D005924 3.3e-20 102.1 126 57.9
C04p23930 Brassica napus HOM05D004934 ORTHO05D005924 3.3e-20 102.1 126 57.9
BolC4t23886H Brassica oleracea HOM05D004934 ORTHO05D005924 3.3e-20 102.1 126 57.9
Aqoxy2G01124 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 9.5e-20 100.5 118 53.4
BcaB02g10110 Brassica carinata HOM05D004934 ORTHO05D005924 9.5e-20 100.5 126 56.3
FAN11G2484 Fragaria x ananassa HOM05D004934 ORTHO05D005924 2.1e-19 99.4 111 55.0
Peaxi162Scf00757g00422 Petunia axillaris HOM05D004934 ORTHO05D005924 2.1e-19 99.4 107 57.9
Rhsim13G0112500 Rhododendron simsii HOM05D004934 ORTHO05D005924 2.1e-19 99.4 161 47.2
PSO339G2388 Papaver somniferum HOM05D004934 ORTHO05D005924 2.8e-19 99.0 100 61.0
FvH4_3g25100 Fragaria vesca HOM05D004934 ORTHO05D005924 3.6e-19 98.6 111 55.0
PSO384G4162 Papaver somniferum HOM05D004934 ORTHO05D005924 8.0e-19 97.4 100 61.0
Lsat_1_v5_gn_2_59421 Lactuca sativa HOM05D004934 ORTHO05D005924 2.3e-18 95.9 111 55.9
HanXRQChr11g0324151 Helianthus annuus HOM05D004934 ORTHO05D005924 8.9e-18 94.0 112 53.6
DCAR_010342 Daucus carota HOM05D004934 ORTHO05D005924 1.5e-17 93.2 93 60.2
SGA_v2.0_scaffold295G47520 Striga asiatica HOM05D004934 ORTHO05D005924 2.0e-17 92.8 127 50.4
PSO339G6001 Papaver somniferum HOM05D004934 ORTHO05D005924 6.4e-16 87.8 120 50.8
PSO801G0293 Papaver somniferum HOM05D004934 ORTHO05D005924 8.3e-16 87.4 120 50.0
Oeu035567.1 Olea europaea HOM05D004934 ORTHO05D005924 1.9e-15 86.3 111 49.5
FAN25G2937 Fragaria x ananassa HOM05D004934 ORTHO05D005924 7.0e-15 84.3 88 54.5
Hma1.2p1_0587F.1_g184260 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 1.6e-14 83.2 75 61.3
Hma1.2p1_3516F.1_g336514 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 1.6e-14 83.2 75 61.3
Gorai.009G084700 Gossypium raimondii HOM05D004934 ORTHO05D005924 2.1e-14 82.8 82 61.0
MBI05_g05303_MAGBIO Magnolia biondii HOM05D004934 ORTHO05D005924 2.1e-14 82.8 133 45.9
Os08g0559000 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 2.1e-14 82.8 120 48.3
Zm00001eb343400 Zea mays HOM05D004934 ORTHO05D005924 4.6e-14 81.6 91 52.7
ECA238G4733 Erigeron canadensis HOM05D004934 ORTHO05D005924 6.0e-14 81.3 111 49.5
Cpa.g.sc32.36 Carica papaya HOM05D004934 ORTHO05D005924 7.8e-14 80.9 77 61.0
Gohir.A05G080000 Gossypium hirsutum HOM05D004934 ORTHO05D005924 7.8e-14 80.9 82 61.0
Gohir.D05G082900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 7.8e-14 80.9 82 59.8
CDE12G0371 Ceratophyllum demersum HOM05D004622 ORTHO05D005431 1.0e-13 80.5 113 47.8
SalBow3G2207 Salvia bowleyana HOM05D004934 ORTHO05D005924 1.3e-13 80.1 126 50.0
Zm00001eb416000 Zea mays HOM05D004934 ORTHO05D005924 1.3e-13 80.1 91 52.7
SGA_v2.0_scaffold177G39414 Striga asiatica HOM05D004934 ORTHO05D005924 3.0e-13 79.0 127 47.2
BcaC02g10901 Brassica carinata HOM05D004934 ORTHO05D005924 3.9e-13 78.6 113 53.1
MELO3C004698.2 Cucumis melo HOM05D004934 ORTHO05D005924 3.9e-13 78.6 101 51.5
Pp3c1_22500 Physcomitrium patens HOM05D004934 ORTHO05D005924 8.6e-13 77.4 116 43.1
CDE04G1608 Ceratophyllum demersum HOM05D004934 ORTHO05D005924 3.3e-12 75.5 128 45.3
Os09g0568900 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 7.3e-12 74.3 88 52.3
HPP92_003219 Vanilla planifolia HOM05D004934 ORTHO05D005924 7.3e-12 74.3 85 54.1
Hma1.2p1_0413F.1_g147325 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 1.2e-11 73.6 76 53.9
DCAR_030570 Daucus carota HOM05D004934 ORTHO05D005924 5.2e-10 68.2 72 63.9
Pp3c14_2790 Physcomitrium patens HOM05D004934 ORTHO05D005924 1.5e-09 66.6 109 41.3
FAN21G3762 Fragaria x ananassa HOM05D004934 ORTHO05D005924 7.5e-09 64.3 76 57.9
Nn6g34871 Nelumbo nucifera HOM05D004934 ORTHO05D005924 7.5e-09 64.3 50 76.0
vmacro03322 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 1.1e-07 60.5 202 33.2
AagrBONN_evm.TU.Sc2ySwM_228.2259 Anthoceros agrestis HOM05D004934 ORTHO05D005924 2.7e-06 55.8 113 38.1
ECA238G3836 Erigeron canadensis HOM05D000407 ORTHO05D001717 6.0e-06 54.7 39 66.7
SEGI_39886 Sequoiadendron giganteum HOM05D007506 ORTHO05D008409 6.0e-06 54.7 42 69.0


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