Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 2.3e-72 275.4 135 100.0
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 2.0e-68 262.3 135 93.3
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 1.8e-61 239.2 135 83.7
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 8.6e-59 230.3 135 80.7
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 4.0e-56 221.5 135 77.8
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 2.6e-55 218.8 133 75.2
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 3.2e-53 211.8 136 77.2
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 7.0e-53 210.7 132 74.2
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 2.0e-52 209.1 131 76.3
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.0e-51 206.8 135 75.6
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 1.0e-51 206.8 133 72.9
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 1.3e-51 206.5 137 73.7
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 1.7e-51 206.1 133 71.4
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 3.0e-51 205.3 134 73.9
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 3.0e-51 205.3 137 72.3
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 3.9e-51 204.9 134 71.6
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 5.0e-51 204.5 135 74.1
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 6.6e-51 204.1 138 69.6
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 1.5e-50 203.0 137 72.3
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 3.3e-50 201.8 135 73.3
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 1.6e-49 199.5 137 73.0
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 2.8e-49 198.7 135 68.9
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 3.6e-49 198.4 135 68.1
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 3.6e-49 198.4 141 73.0
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 4.7e-49 198.0 138 73.2
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 4.7e-49 198.0 137 73.0
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 4.7e-49 198.0 134 70.9
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 6.2e-49 197.6 138 71.0
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 6.2e-49 197.6 129 73.6
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 1.8e-48 196.1 135 66.7
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 3.1e-48 195.3 135 68.9
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 3.1e-48 195.3 128 71.9
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 6.8e-48 194.1 135 68.1
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 6.8e-48 194.1 135 68.1
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 8.9e-48 193.7 135 67.4
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 8.9e-48 193.7 135 67.4
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 8.9e-48 193.7 135 67.4
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 8.9e-48 193.7 138 65.9
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 8.9e-48 193.7 136 66.2
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 1.2e-47 193.4 136 67.6
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.5e-47 193.0 138 64.5
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 1.5e-47 193.0 138 67.4
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 3.4e-47 191.8 139 66.2
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 3.4e-47 191.8 141 66.0
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 3.4e-47 191.8 132 71.2
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 3.4e-47 191.8 134 68.7
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 4.4e-47 191.4 169 60.4
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 5.8e-47 191.0 136 69.9
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 9.8e-47 190.3 128 69.5
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 1.3e-46 189.9 136 69.1
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 2.9e-46 188.7 142 64.8
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 1.1e-45 186.8 142 66.2
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 3.2e-45 185.3 142 66.9
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 3.2e-45 185.3 133 67.7
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 4.1e-45 184.9 135 64.4
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 7.1e-45 184.1 133 66.9
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 2.1e-44 182.6 134 67.9
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 2.7e-44 182.2 138 65.2
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 1.0e-43 180.3 133 66.2
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 1.0e-43 180.3 138 64.5
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 2.3e-43 179.1 133 69.9
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 5.1e-43 177.9 133 63.9
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 5.1e-43 177.9 136 63.2
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 1.1e-42 176.8 135 64.4
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 3.3e-42 175.3 157 60.5
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 5.6e-42 174.5 138 64.5
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 5.6e-42 174.5 138 64.5
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 9.5e-42 173.7 142 61.3
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 1.6e-41 172.9 138 62.3
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 2.1e-41 172.6 138 63.8
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 4.7e-41 171.4 137 63.5
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 8.1e-41 170.6 128 66.4
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 2.3e-40 169.1 133 67.7
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 9.9e-39 163.7 138 59.4
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 4.9e-38 161.4 138 60.9
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 1.1e-37 160.2 145 53.8
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 2.1e-36 156.0 118 66.9
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 3.5e-36 155.2 132 58.3
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 1.7e-35 152.9 132 57.6
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 5.1e-35 151.4 97 74.2
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 6.6e-35 151.0 106 66.0
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 4.3e-34 148.3 98 70.4
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 2.4e-32 142.5 100 69.0
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 2.4e-32 142.5 99 70.7
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 5.8e-31 137.9 133 60.9
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 9.3e-29 130.6 99 67.7
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 3.9e-27 125.2 95 67.4
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 5.1e-27 124.8 101 68.3
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 9.6e-26 120.6 142 51.4
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 1.6e-25 119.8 140 47.9
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 3.6e-25 118.6 98 56.1
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 6.2e-25 117.9 149 49.7
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 3.1e-24 115.5 94 66.0
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 6.9e-24 114.4 135 45.9
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 6.9e-24 114.4 135 45.9
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 4.5e-23 111.7 121 51.2
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 4.2e-21 105.1 130 42.3
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 6.7e-19 97.8 100 54.0
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 1.1e-18 97.1 77 66.2
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 5.6e-18 94.7 105 45.7
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 2.8e-17 92.4 80 56.2
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 2.8e-17 92.4 78 60.3
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 1.4e-16 90.1 105 51.4
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 2.1e-12 76.3 40 95.0
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 5.1e-11 71.6 65 58.5
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 2.5e-10 69.3 93 44.1
Actinidia14340 Actinidia chinensis HOM05D007233 ORTHO05D009043 1.3e-09 67.0 56 58.9


User provided reference genes

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