Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 9.5e-80 300.1 146 100.0
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 7.6e-69 263.8 145 89.7
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 5.1e-25 118.2 112 56.2
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 8.8e-25 117.5 124 54.0
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 1.5e-24 116.7 136 50.7
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 3.7e-23 112.1 108 52.8
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 1.1e-22 110.5 139 48.2
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 1.1e-22 110.5 119 53.8
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 1.8e-22 109.8 132 50.0
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 2.6e-21 105.9 134 46.3
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.6e-21 105.9 115 51.3
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 3.4e-21 105.5 133 48.9
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 7.7e-21 104.4 112 51.8
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 1.0e-20 104.0 136 45.6
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.2e-20 102.8 101 54.5
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.2e-20 102.8 101 54.5
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 2.9e-20 102.4 113 50.4
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 2.9e-20 102.4 125 48.0
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 5.0e-20 101.7 101 53.5
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 2.5e-19 99.4 131 46.6
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 5.5e-19 98.2 154 44.8
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.7e-18 95.9 147 40.1
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 8.0e-18 94.4 147 39.5
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.0e-17 94.0 147 39.5
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 3.9e-17 92.0 135 45.2
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 5.2e-17 91.7 160 39.4
Gohir.D01G161700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 8.8e-17 90.9 114 43.0
Gorai.002G200600 Gossypium raimondii HOM05D007970 ORTHO05D009943 8.8e-17 90.9 114 43.0
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 8.8e-17 90.9 140 44.3
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.5e-16 90.1 151 41.7
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 2.0e-16 89.7 133 40.6
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 3.3e-16 89.0 113 51.3
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 4.4e-16 88.6 151 41.1
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.7e-15 86.7 109 42.2
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 1.7e-15 86.7 118 46.6
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 2.2e-15 86.3 112 45.5
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 4.8e-15 85.1 107 44.9
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 6.3e-15 84.7 131 40.5
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 1.1e-14 84.0 117 43.6
Atru.chr5.3444 Acer truncatum HOM05D007970 ORTHO05D009943 1.4e-14 83.6 119 42.9
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.4e-14 83.6 113 43.4
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 3.1e-14 82.4 110 48.2
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 5.3e-14 81.6 139 42.4
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 9.1e-14 80.9 102 48.0
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 1.2e-13 80.5 106 42.5
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 1.6e-13 80.1 92 51.1
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 7.7e-13 77.8 89 44.9
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 1.0e-12 77.4 136 38.2
MELO3C034691.2 Cucumis melo HOM05D007970 ORTHO05D009943 1.7e-12 76.6 110 45.5
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 3.8e-12 75.5 113 38.9
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 6.5e-12 74.7 107 40.2
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 3.2e-11 72.4 100 46.0
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 4.2e-11 72.0 87 48.3
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 5.5e-11 71.6 106 46.2
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 5.5e-11 71.6 94 48.9
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 9.4e-11 70.9 90 43.3
Nitab4.5_0000020g0340 Nicotiana tabacum HOM05D006872 ORTHO05D006261 1.2e-10 70.5 83 54.2
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 1.2e-10 70.5 88 47.7
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 1.2e-10 70.5 110 43.6
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 1.2e-10 70.5 110 43.6
PGSC0003DMG400016417 Solanum tuberosum HOM05D006872 ORTHO05D006261 1.6e-10 70.1 110 43.6
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 2.7e-10 69.3 90 46.7
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 2.7e-10 69.3 120 39.2
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 4.7e-10 68.6 94 44.7
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 6.1e-10 68.2 95 51.6
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 8.0e-10 67.8 80 52.5
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 3.0e-09 65.9 79 43.0
Sed0004456 Sechium edule HOM05D007970 ORTHO05D009943 8.8e-09 64.3 94 43.6
Sc18g0006290 Simmondsia chinensis HOM05D007970 ORTHO05D009943 8.8e-09 64.3 80 47.5
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 2.0e-08 63.2 99 42.4
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 2.6e-08 62.8 77 45.5
Rhsim04G0129900 Rhododendron simsii HOM05D006872 ORTHO05D006261 4.4e-08 62.0 71 53.5
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 4.4e-08 62.0 91 41.8
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 5.7e-08 61.6 62 59.7
EL10Ac9g21340 Beta vulgaris HOM05D026051 ORTHO05D009943 5.7e-08 61.6 115 34.8
ECA238G4730 Erigeron canadensis HOM05D006872 ORTHO05D006261 7.5e-08 61.2 75 49.3
Lsat_1_v5_gn_6_35120 Lactuca sativa HOM05D006872 ORTHO05D006261 7.5e-08 61.2 75 53.3
Sed0000741 Sechium edule HOM05D006872 ORTHO05D006261 7.5e-08 61.2 103 41.7
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 9.7e-08 60.8 94 44.7
Hma1.2p1_1442F.1_g283790 Hydrangea macrophylla HOM05D006872 ORTHO05D006261 2.2e-07 59.7 74 48.6
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 2.2e-07 59.7 63 46.0
COL.COLO4_29613 Corchorus olitorius HOM05D006872 ORTHO05D006261 2.8e-07 59.3 121 38.0
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 3.7e-07 58.9 101 34.7
Gohir.A01G170700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 3.7e-07 58.9 131 37.4
HanXRQChr15g0494731 Helianthus annuus HOM05D006872 ORTHO05D006261 4.8e-07 58.5 89 41.6
Lsat_1_v5_gn_2_55301 Lactuca sativa HOM05D006872 ORTHO05D006261 4.8e-07 58.5 95 45.3
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 8.2e-07 57.8 96 38.5
TPR.G2416 Trifolium pratense HOM05D062211 ORTHO05D009943 8.2e-07 57.8 130 28.5
CiPaw.13G131800 Carya illinoinensis HOM05D006872 ORTHO05D006261 1.1e-06 57.4 95 41.1
Lalb_Chr20g0111461 Lupinus albus HOM05D006872 ORTHO05D006261 1.1e-06 57.4 126 34.1
Lsat_1_v5_gn_5_87380 Lactuca sativa HOM05D006872 ORTHO05D006261 1.4e-06 57.0 76 50.0
Thecc.05G100900 Theobroma cacao HOM05D006872 ORTHO05D006261 1.4e-06 57.0 90 45.6
Gohir.A01G202400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 1.8e-06 56.6 110 40.0
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 2.4e-06 56.2 91 45.1
Gorai.002G236200 Gossypium raimondii HOM05D006872 ORTHO05D006261 2.4e-06 56.2 99 43.4
TWI77G0288 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 2.4e-06 56.2 108 37.0
Gohir.D01G192400 Gossypium hirsutum HOM05D006872 ORTHO05D006261 3.1e-06 55.8 110 40.9
CANSAT64G1977 Cannabis sativa HOM05D006872 ORTHO05D006261 4.1e-06 55.5 59 55.9
Glyma.03G200500 Glycine max HOM05D006872 ORTHO05D006261 4.1e-06 55.5 119 35.3
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 5.3e-06 55.1 89 34.8
MBI17_g00990_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 5.3e-06 55.1 73 46.6
CDE02G4309 Ceratophyllum demersum HOM05D006872 ORTHO05D006261 7.0e-06 54.7 82 46.3
Duzib128G0031 Durio zibethinus HOM05D006872 ORTHO05D006261 7.0e-06 54.7 119 37.8


User provided reference genes

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