Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0115000 Salix brachista HOM05D000665 ORTHO05D000140 4.3e-124 448.0 222 100.0
Potri.004G172900 Populus trichocarpa HOM05D000665 ORTHO05D000140 7.9e-102 374.0 297 68.4
Manes.11G096000 Manihot esculenta HOM05D000665 ORTHO05D000140 4.1e-82 308.5 291 57.7
QL11p049281 Quercus lobata HOM05D000665 ORTHO05D000140 9.1e-82 307.4 297 57.9
Duzib132G1144 Durio zibethinus HOM05D000665 ORTHO05D000140 1.2e-78 297.0 296 55.1
COL.COLO4_17303 Corchorus olitorius HOM05D000665 ORTHO05D000140 1.6e-78 296.6 296 55.7
CiPaw.05G079800 Carya illinoinensis HOM05D000665 ORTHO05D000140 3.6e-78 295.4 298 56.4
GSVIVG01024053001 Vitis vinifera HOM05D000665 ORTHO05D000140 2.0e-76 289.7 296 54.1
Thecc.02G063400 Theobroma cacao HOM05D000665 ORTHO05D000140 4.4e-76 288.5 296 53.7
Atru.chr5.3284 Acer truncatum HOM05D000665 ORTHO05D000140 8.2e-75 284.3 300 54.7
Gorai.002G195300 Gossypium raimondii HOM05D000665 ORTHO05D000140 1.1e-74 283.9 296 52.7
Haze_02167 Corylus avellana HOM05D000665 ORTHO05D000140 1.2e-73 280.4 298 53.0
Ciclev10028943m.g Citrus clementina HOM05D000665 ORTHO05D000140 2.2e-72 276.2 295 53.2
Dinv41959 Davidia involucrata HOM05D000665 ORTHO05D000140 2.2e-72 276.2 289 54.0
Gohir.A01G166000 Gossypium hirsutum HOM05D000665 ORTHO05D000140 1.5e-71 273.5 296 52.7
Gohir.D01G157200 Gossypium hirsutum HOM05D000665 ORTHO05D000140 1.0e-69 267.3 302 50.3
Dinv04945 Davidia involucrata HOM05D000665 ORTHO05D000140 1.8e-69 266.5 296 50.3
Cpa.g.sc37.168 Carica papaya HOM05D000665 ORTHO05D000140 2.6e-68 262.7 298 51.7
CANSAT25G2307 Cannabis sativa HOM05D000665 ORTHO05D000140 1.3e-67 260.4 305 49.2
Lj3g0017321 Lotus japonicus HOM05D000665 ORTHO05D000140 7.0e-66 254.6 294 51.7
arahy.Tifrunner.gnm1.ann1.PQJ7DP Arachis hypogaea HOM05D000665 ORTHO05D000140 1.3e-64 250.4 295 49.8
arahy.Tifrunner.gnm1.ann1.IV6FG9 Arachis hypogaea HOM05D000665 ORTHO05D000140 2.5e-63 246.1 295 49.5
Cfa005219 Carpinus fangiana HOM05D000665 ORTHO05D000140 5.6e-39 165.2 163 56.4
Hma1.2p1_0258F.1_g104230 Hydrangea macrophylla HOM05D000665 ORTHO05D000140 1.1e-29 134.4 279 32.3
Lj6C264T4 Lonicera japonica HOM05D000665 ORTHO05D000140 3.5e-25 119.4 264 31.4
COL.COLO4_14074 Corchorus olitorius HOM05D000555 ORTHO05D000646 1.7e-24 117.1 116 50.9
ATR0776G040 Amborella trichopoda HOM05D000665 ORTHO05D000140 4.7e-22 109.0 277 29.6
Hma1.2p1_0026F.1_g016430 Hydrangea macrophylla HOM05D000665 ORTHO05D000140 1.8e-21 107.1 156 39.7
Nn6g33679 Nelumbo nucifera HOM05D000665 ORTHO05D000140 1.3e-19 100.9 285 29.5
DCAR_020933 Daucus carota HOM05D000665 ORTHO05D000140 1.7e-19 100.5 383 27.9
MBI02_g21882_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 6.4e-19 98.6 290 29.0
CDE08G0001 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 5.4e-18 95.5 290 27.6
ATR0585G101 Amborella trichopoda HOM05D000665 ORTHO05D000140 1.2e-17 94.4 273 26.0
CDE04G3732 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 8.7e-16 88.2 290 26.9
ATR0081G006 Amborella trichopoda HOM05D000665 ORTHO05D000140 1.3e-14 84.3 284 23.2
CDE07G1776 Ceratophyllum demersum HOM05D054275 ORTHO05D000140 2.1e-14 83.6 178 31.5
Nn5g29256 Nelumbo nucifera HOM05D000665 ORTHO05D000140 2.1e-14 83.6 81 48.1
CDE04G0042 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 1.8e-13 80.5 284 24.3
ATR0693G289 Amborella trichopoda HOM05D000665 ORTHO05D000140 4.0e-13 79.3 284 23.6
CDE04G0179 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 9.9e-12 74.7 301 22.6
MBI19_g03252_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 8.4e-11 71.6 288 23.6
ATR0776G057 Amborella trichopoda HOM05D000665 ORTHO05D000140 4.2e-10 69.3 287 23.0
ATR0815G057 Amborella trichopoda HOM05D034454 ORTHO05D031100 2.1e-09 67.0 182 30.8
CDE08G0696 Ceratophyllum demersum HOM05D000032 ORTHO05D007907 2.7e-09 66.6 292 24.0
MBI05_g31854_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 6.0e-09 65.5 211 27.0
MBI18_g11288_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 1.3e-08 64.3 299 22.4
PSO541G6339 Papaver somniferum HOM05D000665 ORTHO05D000140 5.1e-08 62.4 278 23.4
CDE04G2523 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 6.7e-08 62.0 283 23.0
PSO724G0108 Papaver somniferum HOM05D000665 ORTHO05D000140 1.9e-07 60.5 242 24.8
ATR1089G093 Amborella trichopoda HOM05D000665 ORTHO05D000140 2.5e-07 60.1 182 29.1
Prupe.1G395600 Prunus persica HOM05D000665 ORTHO05D000140 6.2e-06 55.5 268 20.5


User provided reference genes

Program Settings