Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 1.1e-119 433.3 225 100.0
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 3.0e-109 398.7 225 92.9
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 7.8e-81 304.3 230 75.7
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 4.4e-76 288.5 215 74.0
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 5.8e-76 288.1 215 74.0
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 1.7e-75 286.6 223 72.2
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 4.9e-75 285.0 215 74.4
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 5.4e-74 281.6 214 72.9
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 7.1e-74 281.2 219 72.6
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 9.2e-74 280.8 229 68.6
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 1.0e-72 277.3 225 72.4
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 3.9e-72 275.4 221 70.1
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 8.6e-72 274.2 230 69.1
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 2.5e-71 272.7 221 68.3
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 5.6e-71 271.6 221 68.8
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 5.6e-71 271.6 229 68.6
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 1.6e-70 270.0 205 72.2
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 2.1e-70 269.6 218 70.2
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 3.6e-70 268.9 218 67.4
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 8.1e-70 267.7 217 71.0
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 8.1e-70 267.7 217 71.0
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 1.8e-69 266.5 218 67.4
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 1.8e-69 266.5 217 71.0
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 4.0e-69 265.4 221 67.9
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 5.2e-69 265.0 226 67.3
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 6.8e-69 264.6 169 82.8
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 2.0e-68 263.1 226 65.9
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 2.6e-68 262.7 225 66.2
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 2.6e-68 262.7 202 71.3
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 2.6e-68 262.7 236 66.1
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 2.6e-68 262.7 172 82.0
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 2.6e-68 262.7 225 67.1
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 4.4e-68 261.9 218 67.9
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 5.8e-68 261.5 220 67.7
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 1.3e-67 260.4 203 70.4
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 2.2e-67 259.6 219 67.6
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 3.2e-66 255.8 227 66.5
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 4.2e-66 255.4 227 66.5
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 4.2e-66 255.4 222 66.2
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 4.2e-66 255.4 167 82.6
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 7.1e-66 254.6 167 82.0
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 7.1e-66 254.6 222 67.6
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 1.6e-65 253.4 192 74.5
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.1e-65 253.1 171 80.7
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 3.5e-65 252.3 225 65.3
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 3.5e-65 252.3 225 65.8
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 7.8e-65 251.1 224 66.1
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.0e-64 250.8 171 80.7
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.7e-64 250.0 216 68.5
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 6.6e-64 248.1 233 63.9
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 1.5e-63 246.9 217 64.5
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 1.5e-63 246.9 217 64.5
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 4.3e-63 245.4 206 69.4
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 4.3e-63 245.4 175 72.0
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 5.6e-63 245.0 169 80.5
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 5.6e-63 245.0 171 77.2
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 9.6e-63 244.2 171 78.9
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 1.3e-62 243.8 172 76.7
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.6e-62 243.4 225 64.9
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 2.1e-62 243.0 224 63.4
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 2.1e-62 243.0 171 78.4
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 2.8e-62 242.7 189 68.3
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 4.8e-62 241.9 166 80.7
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 8.1e-62 241.1 173 74.6
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 8.1e-62 241.1 170 74.7
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 1.1e-61 240.7 176 75.6
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 2.4e-61 239.6 226 65.0
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 2.4e-61 239.6 175 77.7
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 3.1e-61 239.2 174 74.7
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 5.3e-61 238.4 168 76.8
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 1.2e-60 237.3 170 78.2
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 7.6e-60 234.6 159 79.2
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 7.6e-60 234.6 171 77.8
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 9.9e-60 234.2 181 69.1
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 9.9e-60 234.2 232 59.5
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 3.8e-59 232.3 181 70.7
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 4.9e-59 231.9 230 59.1
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 1.9e-58 229.9 236 61.9
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 3.2e-58 229.2 173 74.6
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 4.2e-58 228.8 177 74.6
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 4.2e-58 228.8 168 75.0
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 7.1e-58 228.0 181 70.7
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 2.1e-57 226.5 172 69.8
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 6.0e-57 224.9 171 73.1
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 7.9e-57 224.6 172 70.9
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.3e-56 223.8 200 64.5
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 1.3e-56 223.8 190 64.2
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 6.6e-56 221.5 173 72.3
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 8.7e-56 221.1 126 90.5
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 2.5e-55 219.5 237 57.8
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 7.4e-55 218.0 173 68.2
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 1.6e-54 216.9 149 82.6
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 4.0e-53 212.2 177 68.4
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 3.4e-52 209.1 188 64.4
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 4.5e-52 208.8 149 77.9
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 4.5e-52 208.8 162 73.5
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 7.6e-52 208.0 123 87.8
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 8.4e-51 204.5 159 76.7
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 5.5e-50 201.8 126 80.2
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.7e-49 199.5 122 85.2
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.7e-49 199.5 122 85.2
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 3.5e-49 199.1 167 62.9
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 1.5e-47 193.7 234 53.0
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 5.8e-44 181.8 163 58.3
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 1.3e-43 180.6 261 47.1
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 2.9e-43 179.5 168 54.8
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 1.4e-42 177.2 149 64.4
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 7.1e-42 174.9 153 58.8
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 1.9e-39 166.8 144 57.6
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.0e-32 144.4 167 54.5
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 3.9e-32 142.5 108 72.2
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 1.1e-31 141.0 168 46.4
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 6.9e-29 131.7 98 70.4
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 3.4e-28 129.4 120 62.5
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 4.2e-26 122.5 160 43.8
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 9.4e-26 121.3 98 62.2
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 3.3e-23 112.8 90 64.4
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 2.2e-22 110.2 66 87.9
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 1.1e-21 107.8 132 40.9
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 5.0e-19 99.0 71 77.5
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 5.0e-19 99.0 147 44.2


User provided reference genes

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