Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 0.0e+00 1192.9 593 100.0
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 0.0e+00 1124.8 594 94.6
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 0.0e+00 1094.3 566 92.4
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 0.0e+00 1092.8 566 92.2
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 7.1e-299 1030.0 566 85.2
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 7.8e-298 1026.5 594 83.7
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 5.3e-294 1013.8 596 81.4
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 1.2e-293 1012.7 595 82.9
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 1.5e-293 1012.3 567 85.0
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 2.0e-293 1011.9 594 83.0
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 2.2e-292 1008.4 601 80.2
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 3.8e-292 1007.7 573 82.7
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 4.2e-291 1004.2 567 84.0
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 5.4e-291 1003.8 596 81.5
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 3.0e-289 998.0 568 83.5
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 5.1e-289 997.3 573 83.1
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 5.1e-289 997.3 567 83.4
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 5.1e-289 997.3 567 83.4
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.5e-288 995.7 567 83.4
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 1.9e-288 995.3 594 80.6
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 3.3e-288 994.6 565 83.2
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 2.1e-287 991.9 571 84.2
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 2.8e-287 991.5 569 82.8
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 6.2e-287 990.3 576 82.5
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.8e-286 988.8 566 83.0
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 2.6e-285 984.9 569 82.2
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 1.3e-284 982.6 573 82.2
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 2.2e-284 981.9 579 80.5
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 3.8e-284 981.1 582 82.0
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 2.4e-283 978.4 567 82.7
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 4.2e-283 977.6 582 79.6
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 9.3e-283 976.5 598 79.4
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 4.6e-282 974.2 598 78.4
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 7.9e-282 973.4 603 77.6
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 1.3e-281 972.6 586 79.5
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 1.3e-281 972.6 568 81.5
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 1.8e-281 972.2 572 80.9
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 2.3e-281 971.8 576 80.6
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 3.0e-281 971.5 598 77.9
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 3.9e-281 971.1 599 79.5
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 2.5e-280 968.4 569 80.5
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 3.3e-280 968.0 576 79.7
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 3.3e-280 968.0 620 76.0
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 4.3e-280 967.6 620 75.8
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 5.6e-280 967.2 620 75.8
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 5.6e-280 967.2 605 77.5
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 1.3e-279 966.1 566 80.6
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.6e-279 965.7 620 75.8
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 6.2e-279 963.8 588 78.9
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 8.1e-279 963.4 594 78.1
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 1.1e-278 963.0 601 78.9
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 1.8e-278 962.2 575 80.9
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 2.4e-278 961.8 578 78.0
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 3.1e-278 961.4 596 78.9
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 1.2e-277 959.5 597 78.4
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 2.6e-277 958.4 573 79.4
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 5.8e-277 957.2 567 79.9
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 5.8e-277 957.2 595 78.8
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 1.3e-276 956.1 596 77.9
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 1.7e-276 955.7 599 78.5
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 2.9e-276 954.9 571 80.4
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 2.9e-276 954.9 558 81.2
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 1.4e-275 952.6 696 68.2
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 2.5e-275 951.8 573 78.2
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 2.5e-275 951.8 598 78.1
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 3.2e-275 951.4 597 76.7
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 4.2e-275 951.0 579 79.1
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 9.3e-275 949.9 588 78.2
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.6e-274 949.1 596 76.3
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 1.6e-274 949.1 565 80.7
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 2.1e-274 948.7 603 75.8
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 1.0e-273 946.4 600 77.2
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 1.3e-273 946.0 577 78.7
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 1.3e-273 946.0 580 80.2
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.8e-273 945.7 576 77.4
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 2.3e-273 945.3 574 78.6
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 1.1e-272 943.0 569 79.4
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 1.9e-272 942.2 574 78.4
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 1.9e-272 942.2 578 78.5
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 3.3e-272 941.4 588 79.6
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 4.3e-272 941.0 601 76.5
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 1.3e-271 939.5 603 76.6
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 2.1e-271 938.7 600 76.3
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 3.7e-271 937.9 596 76.3
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 6.3e-271 937.2 558 78.3
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 1.4e-270 936.0 572 78.7
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 1.4e-270 936.0 587 77.9
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 4.1e-270 934.5 596 77.3
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 6.9e-270 933.7 539 81.6
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 2.6e-269 931.8 571 78.5
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 1.0e-268 929.9 546 81.7
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 1.0e-268 929.9 589 76.4
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 1.7e-268 929.1 606 76.2
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 5.0e-268 927.5 594 75.3
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 6.5e-268 927.2 554 77.6
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 1.2e-266 922.9 582 74.9
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 2.1e-266 922.2 615 74.1
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 2.1e-266 922.2 632 74.4
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 6.1e-266 920.6 597 74.0
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 1.0e-265 919.8 595 75.3
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 5.1e-265 917.5 606 73.6
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 2.2e-263 912.1 579 75.3
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 3.7e-263 911.4 598 73.4
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 4.8e-263 911.0 519 83.6
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 6.3e-263 910.6 597 73.7
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 1.4e-262 909.4 570 76.0
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 1.2e-261 906.4 570 75.4
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 2.6e-261 905.2 596 73.2
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 5.9e-261 904.0 570 75.3
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 5.9e-261 904.0 569 75.2
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 5.9e-261 904.0 570 75.3
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 7.7e-261 903.7 596 73.2
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 7.7e-261 903.7 596 73.3
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 7.7e-261 903.7 569 75.2
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 1.7e-260 902.5 571 75.0
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 1.7e-260 902.5 596 73.5
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 5.5e-259 897.5 569 77.3
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 2.0e-253 879.0 581 74.4
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 7.7e-253 877.1 602 72.6
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.9e-251 872.5 518 79.9
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 2.7e-250 868.6 496 84.1
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 6.7e-249 864.0 932 51.8
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 1.2e-242 843.2 539 73.7
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 5.3e-238 827.8 581 68.5
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 4.5e-237 824.7 868 51.7
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 2.3e-225 785.8 567 68.3
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 6.6e-220 767.7 566 67.3
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 5.4e-214 748.0 517 71.8
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 2.7e-213 745.7 593 62.6
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 8.3e-207 724.2 401 85.8
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 5.2e-201 704.9 433 75.1
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 1.2e-197 693.7 591 56.3
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 1.6e-178 630.2 340 89.4
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.0e-172 610.9 431 71.0
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 8.2e-162 574.7 420 70.5
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 2.6e-152 543.1 577 48.4
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 4.2e-150 535.8 307 85.7
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 7.4e-139 498.4 442 62.0
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 1.5e-115 421.0 349 57.3
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 8.9e-100 368.6 450 42.7
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 4.9e-98 362.8 602 36.5
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 3.5e-96 356.7 213 76.1
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 1.7e-95 354.4 516 36.8
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 1.3e-90 338.2 188 87.8
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 1.2e-88 331.6 233 68.7
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 1.6e-80 304.7 226 64.2
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 1.6e-80 304.7 226 64.2
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.3e-79 301.6 218 67.9
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 4.3e-78 296.6 620 33.2
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 6.6e-71 272.7 167 74.3
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 2.4e-68 264.2 169 71.6
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.0e-63 248.8 367 35.1
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 7.4e-54 216.1 228 53.1
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 7.4e-46 189.5 108 87.0
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 3.4e-35 154.1 117 61.5
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 6.7e-31 139.8 72 91.7
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 1.3e-29 135.6 160 48.8
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 2.2e-29 134.8 156 49.4
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 2.9e-18 97.8 105 51.4
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 8.8e-15 86.3 42 88.1
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 2.0e-14 85.1 49 73.5
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 2.0e-14 85.1 49 73.5
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 1.3e-13 82.4 48 70.8
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 5.3e-12 77.0 43 76.7
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 7.2e-09 66.6 52 57.7


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