Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 1.0e-128 463.4 225 100.0
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 8.8e-117 423.7 219 93.6
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 9.5e-87 323.9 217 72.4
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 1.1e-85 320.5 218 73.9
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 8.9e-85 317.4 213 72.3
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 3.4e-84 315.5 215 71.6
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 2.4e-82 309.3 205 73.2
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 3.2e-82 308.9 202 72.3
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 6.0e-81 304.7 213 70.9
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 7.8e-81 304.3 214 70.6
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 7.8e-81 304.3 215 70.2
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 1.3e-80 303.5 220 70.5
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 1.3e-80 303.5 203 73.4
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.3e-80 302.8 214 69.6
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 3.0e-80 302.4 214 69.6
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 3.9e-80 302.0 215 69.8
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 3.9e-80 302.0 213 68.5
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 1.1e-79 300.4 214 71.5
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 1.9e-79 299.7 216 68.1
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.2e-78 297.0 219 66.7
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 2.1e-78 296.2 215 67.0
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 2.8e-78 295.8 202 66.3
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 3.6e-78 295.4 202 71.3
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 3.6e-78 295.4 213 69.0
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 8.1e-78 294.3 219 66.7
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 1.1e-77 293.9 203 70.4
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 1.8e-77 293.1 200 71.0
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 1.8e-77 293.1 199 70.4
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 2.0e-76 289.7 221 67.0
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 2.6e-76 289.3 218 66.1
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 3.4e-76 288.9 192 72.9
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 4.4e-76 288.5 198 70.7
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.7e-75 286.6 218 67.4
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 2.2e-75 286.2 203 68.5
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 2.9e-75 285.8 219 66.7
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 3.7e-75 285.4 218 65.6
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 4.9e-75 285.0 220 65.9
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.4e-74 283.5 220 66.8
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.9e-74 283.1 220 65.5
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.9e-74 283.1 220 65.5
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 2.4e-74 282.7 190 70.0
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.4e-74 281.6 219 66.7
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 7.1e-74 281.2 203 67.0
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 7.1e-74 281.2 199 68.3
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 9.2e-74 280.8 219 63.5
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 4.6e-73 278.5 220 66.4
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 7.8e-73 277.7 187 72.2
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 1.7e-72 276.6 208 68.8
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 6.6e-72 274.6 186 68.8
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 8.6e-72 274.2 202 65.8
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 3.3e-71 272.3 223 63.7
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 5.6e-71 271.6 220 62.7
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 7.3e-71 271.2 220 62.7
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 9.6e-71 270.8 223 63.2
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 1.2e-70 270.4 223 63.2
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 1.2e-70 270.4 223 63.7
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 1.6e-70 270.0 223 63.7
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 3.6e-70 268.9 226 59.7
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 4.7e-70 268.5 202 64.9
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 8.1e-70 267.7 209 64.1
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 8.1e-70 267.7 213 62.4
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 8.1e-70 267.7 213 63.4
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 1.1e-69 267.3 213 62.4
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 3.1e-69 265.8 204 65.7
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 3.1e-69 265.8 193 66.3
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 5.2e-69 265.0 196 64.8
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 5.2e-69 265.0 196 64.8
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 5.2e-69 265.0 205 66.3
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 2.0e-68 263.1 198 66.7
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 2.6e-68 262.7 202 65.3
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 2.6e-68 262.7 196 66.8
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 3.4e-68 262.3 212 65.6
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 3.4e-68 262.3 198 66.2
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 9.9e-68 260.8 196 63.8
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 9.9e-68 260.8 196 63.8
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 9.9e-68 260.8 193 67.4
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.3e-67 260.4 219 58.0
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.9e-66 256.5 188 64.9
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 2.4e-66 256.1 214 60.7
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 1.6e-65 253.4 187 66.8
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 3.9e-64 248.8 197 60.9
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 8.1e-62 241.1 220 58.6
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 1.1e-61 240.7 218 57.8
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 4.4e-60 235.3 168 70.2
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 2.4e-58 229.6 165 67.9
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.7e-56 223.4 237 54.9
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 1.9e-55 219.9 197 58.4
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 1.3e-48 197.2 181 51.4
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 5.3e-45 185.3 185 53.0
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 2.0e-44 183.3 187 54.0
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 2.0e-44 183.3 201 50.2
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 7.6e-44 181.4 183 49.2
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.1e-37 159.1 135 60.7
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 2.0e-36 156.8 149 54.4
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 2.9e-35 152.9 232 36.6
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 2.5e-34 149.8 100 72.0
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 3.2e-34 149.4 217 40.6
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 3.7e-30 136.0 103 61.2
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 8.2e-30 134.8 202 43.6
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 1.7e-27 127.1 85 71.8
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 6.5e-27 125.2 137 47.4
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 4.3e-23 112.5 139 45.3
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.8e-22 109.8 86 60.5
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 4.1e-21 105.9 84 57.1
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 3.2e-18 96.3 80 56.2
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 3.6e-17 92.8 71 69.0
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 3.9e-16 89.4 150 37.3
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 6.3e-14 82.0 148 32.4
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 4.1e-13 79.3 59 62.7
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 1.5e-07 60.8 30 83.3
AUR62017447 Chenopodium quinoa HOM05D000916 ORTHO05D007921 4.4e-07 59.3 142 33.8
HanXRQChr09g0266951 Helianthus annuus HOM05D000916 ORTHO05D007921 7.5e-07 58.5 150 32.0
MSTRG.25473 Avicennia marina HOM05D000916 ORTHO05D007921 1.7e-06 57.4 187 29.4
Eucgr.F04110 Eucalyptus grandis HOM05D000916 ORTHO05D007921 2.2e-06 57.0 145 32.4
Lalb_Chr02g0149821 Lupinus albus HOM05D000916 ORTHO05D007921 6.3e-06 55.5 111 32.4


User provided reference genes

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