Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 5.8e-86 320.9 163 100.0
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 8.7e-74 280.4 163 87.1
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 3.7e-48 195.3 163 62.6
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.8e-42 176.4 165 58.2
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 1.8e-42 176.4 165 58.2
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 3.0e-42 175.6 164 56.7
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 1.2e-41 173.7 167 57.5
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 5.7e-41 171.4 159 52.8
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 8.3e-40 167.5 154 56.5
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 1.4e-39 166.8 155 56.1
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 9.1e-39 164.1 164 51.8
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 1.2e-38 163.7 127 60.6
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 3.5e-38 162.2 155 56.1
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 7.7e-38 161.0 139 59.0
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 5.0e-37 158.3 163 52.8
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 1.1e-36 157.1 164 50.0
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 1.5e-36 156.8 164 50.6
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 3.2e-36 155.6 144 54.2
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 4.2e-36 155.2 156 49.4
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 5.5e-36 154.8 155 54.8
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 9.4e-36 154.1 126 62.7
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 1.2e-35 153.7 163 52.1
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 1.2e-35 153.7 163 50.9
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 2.1e-35 152.9 164 50.0
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 3.6e-35 152.1 147 55.8
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 8.0e-35 151.0 143 54.5
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 8.0e-35 151.0 154 53.2
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 5.2e-34 148.3 124 62.9
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 6.8e-34 147.9 163 50.9
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 8.8e-34 147.5 152 50.0
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 8.8e-34 147.5 110 64.5
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 1.2e-33 147.1 159 51.6
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 1.5e-33 146.7 151 53.6
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 2.6e-33 146.0 152 50.0
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 3.4e-33 145.6 94 73.4
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 3.4e-33 145.6 94 73.4
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 3.4e-33 145.6 153 48.4
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 4.4e-33 145.2 94 73.4
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 1.3e-32 143.7 111 65.8
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 1.7e-32 143.3 157 51.6
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 1.7e-32 143.3 89 76.4
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 3.7e-32 142.1 154 50.0
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 4.8e-32 141.7 150 53.3
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 4.8e-32 141.7 163 47.9
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 8.3e-32 141.0 140 52.1
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 1.8e-31 139.8 101 66.3
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 2.4e-31 139.4 136 52.2
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 3.1e-31 139.0 138 52.2
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 4.1e-31 138.7 156 48.1
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 4.1e-31 138.7 157 52.2
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 5.4e-31 138.3 157 45.9
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 5.4e-31 138.3 157 45.9
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 5.4e-31 138.3 110 59.1
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 7.0e-31 137.9 94 67.0
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 9.1e-31 137.5 159 45.3
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 9.1e-31 137.5 129 53.5
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 1.2e-30 137.1 157 45.9
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 1.2e-30 137.1 157 45.9
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 1.2e-30 137.1 93 72.0
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 2.0e-30 136.3 164 47.6
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 2.7e-30 136.0 90 68.9
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 3.5e-30 135.6 98 66.3
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 3.5e-30 135.6 98 66.3
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 4.5e-30 135.2 108 60.2
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 7.7e-30 134.4 162 46.9
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 7.7e-30 134.4 128 50.8
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 7.7e-30 134.4 123 55.3
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 1.3e-29 133.7 92 68.5
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 1.3e-29 133.7 94 64.9
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 1.7e-29 133.3 92 66.3
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 2.3e-29 132.9 157 47.8
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 2.3e-29 132.9 117 57.3
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.9e-29 132.5 87 72.4
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 2.9e-29 132.5 159 45.3
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 3.8e-29 132.1 157 46.5
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 5.0e-29 131.7 93 69.9
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 6.6e-29 131.3 159 45.9
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 6.6e-29 131.3 93 64.5
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 1.5e-28 130.2 123 53.7
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.9e-28 129.8 87 69.0
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 1.2e-27 127.1 110 57.3
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 1.2e-27 127.1 94 63.8
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 1.6e-27 126.7 79 75.9
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 2.1e-27 126.3 160 45.6
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 2.1e-27 126.3 88 67.0
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 1.0e-26 124.0 75 74.7
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 4.0e-26 122.1 77 71.4
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 6.8e-26 121.3 89 60.7
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 1.2e-25 120.6 93 62.4
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.0e-21 107.5 157 40.1
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.0e-21 107.5 157 40.1
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 1.0e-21 107.5 108 50.9
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 1.3e-21 107.1 86 54.7
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 1.3e-21 107.1 82 58.5
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 3.9e-21 105.5 86 55.8
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 2.5e-20 102.8 88 58.0
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 2.0e-17 93.2 91 47.3
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 1.3e-16 90.5 89 51.7
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 1.4e-15 87.0 73 57.5
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 4.7e-11 72.0 62 54.8
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 8.9e-10 67.8 49 61.2


User provided reference genes

Program Settings