Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0058100 Salix brachista HOM05D007778 ORTHO05D009819 6.5e-126 454.1 240 100.0
Potri.017G129700 Populus trichocarpa HOM05D007778 ORTHO05D009819 1.7e-25 120.6 122 58.2
Sabra17G0107900 Salix brachista HOM05D007778 ORTHO05D009819 9.3e-24 114.8 118 57.6
Ciclev10012879m.g Citrus clementina HOM05D007778 ORTHO05D009819 1.0e-14 84.7 117 44.4
TWI74G0094 Tripterygium wilfordii HOM05D007778 ORTHO05D009819 3.3e-13 79.7 92 50.0
Prupe.3G011900 Prunus persica HOM05D007778 ORTHO05D009819 2.2e-12 77.0 134 36.6
Manes.01G118400 Manihot esculenta HOM05D007778 ORTHO05D009819 3.7e-12 76.3 119 42.9
Duzib211G0615 Durio zibethinus HOM05D007778 ORTHO05D009819 1.1e-11 74.7 119 39.5
Glyma.11G204300 Glycine max HOM05D007778 ORTHO05D009819 1.1e-11 74.7 153 35.9
Nn4g24886 Nelumbo nucifera HOM05D007778 ORTHO05D009819 2.4e-11 73.6 144 36.8
QL02p054670 Quercus lobata HOM05D007778 ORTHO05D009819 5.3e-11 72.4 117 40.2
Dinv17427 Davidia involucrata HOM05D007778 ORTHO05D009819 6.9e-11 72.0 123 40.7
Atru.chr1.1920 Acer truncatum HOM05D007778 ORTHO05D009819 1.2e-10 71.2 122 42.6
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 1.2e-10 71.2 105 39.0
Lalb_Chr15g0085401 Lupinus albus HOM05D007778 ORTHO05D009819 2.6e-10 70.1 93 41.9
RcHm_v2.0_Chr3g0487781 Rosa chinensis HOM05D007778 ORTHO05D009819 2.6e-10 70.1 134 36.6
Glyma.18G046700 Glycine max HOM05D007778 ORTHO05D009819 3.4e-10 69.7 149 34.9
Thecc.04G114700 Theobroma cacao HOM05D007778 ORTHO05D009819 7.7e-10 68.6 118 39.0
CiPaw.03G008500 Carya illinoinensis HOM05D007778 ORTHO05D009819 1.0e-09 68.2 117 39.3
PSO063G5463 Papaver somniferum HOM05D007778 ORTHO05D009819 1.0e-09 68.2 108 42.6
arahy.Tifrunner.gnm1.ann1.0X1LIN Arachis hypogaea HOM05D007778 ORTHO05D009819 1.3e-09 67.8 137 36.5
arahy.Tifrunner.gnm1.ann1.U19ACF Arachis hypogaea HOM05D007778 ORTHO05D009819 1.7e-09 67.4 137 36.5
Lj6g0006010 Lotus japonicus HOM05D007778 ORTHO05D009819 2.2e-09 67.0 145 33.1
Cc07_g09880 Coffea canephora HOM05D007778 ORTHO05D009819 8.5e-09 65.1 98 40.8
AUR62037508 Chenopodium quinoa HOM05D007778 ORTHO05D009819 1.1e-08 64.7 120 38.3
FAN28G2555 Fragaria x ananassa HOM05D007778 ORTHO05D009819 1.1e-08 64.7 147 33.3
EL10Ac4g08900 Beta vulgaris HOM05D007778 ORTHO05D009819 1.9e-08 63.9 93 39.8
FvH4_1g27614 Fragaria vesca HOM05D007778 ORTHO05D009819 1.9e-08 63.9 135 33.3
MD09G1282000 Malus domestica HOM05D007778 ORTHO05D009819 1.9e-08 63.9 114 37.7
PSO782G0382 Papaver somniferum HOM05D007778 ORTHO05D009819 1.9e-08 63.9 111 39.6
Aqoxy3G04229 Aquilegia oxysepala HOM05D007778 ORTHO05D009819 2.5e-08 63.5 108 38.0
MD09G1282100 Malus domestica HOM05D007778 ORTHO05D009819 2.5e-08 63.5 113 36.3
FAN28G0539 Fragaria x ananassa HOM05D007778 ORTHO05D009819 3.2e-08 63.2 123 35.8
AUR62004744 Chenopodium quinoa HOM05D007778 ORTHO05D009819 9.4e-08 61.6 93 40.9
VMungo0540G2068 Vigna mungo HOM05D007778 ORTHO05D009819 9.4e-08 61.6 155 32.3
Cpa.g.sc116.56 Carica papaya HOM05D007778 ORTHO05D009819 1.2e-07 61.2 113 38.9
Duzib133G0400 Durio zibethinus HOM05D007778 ORTHO05D009819 1.2e-07 61.2 95 42.1
Nitab4.5_0001485g0010 Nicotiana tabacum HOM05D007778 ORTHO05D009819 1.2e-07 61.2 92 41.3
Migut.D01632 Erythranthe guttata HOM05D007778 ORTHO05D009819 1.6e-07 60.8 97 39.2
ClCG01G008280 Citrullus lanatus HOM05D007778 ORTHO05D009819 2.1e-07 60.5 100 40.0
Actinidia04816 Actinidia chinensis HOM05D001693 ORTHO05D001588 2.7e-07 60.1 99 38.4
Gohir.D07G082800 Gossypium hirsutum HOM05D007778 ORTHO05D009819 8.0e-07 58.5 115 33.9
Gorai.001G088400 Gossypium raimondii HOM05D007778 ORTHO05D009819 8.0e-07 58.5 115 33.9
CsaV3_5G020220 Cucumis sativus L. HOM05D007778 ORTHO05D009819 1.0e-06 58.2 94 40.4
SalBow7G4718 Salvia bowleyana HOM05D007778 ORTHO05D009819 1.0e-06 58.2 113 38.1
Nitab4.5_0007160g0010 Nicotiana tabacum HOM05D007778 ORTHO05D009819 1.4e-06 57.8 92 38.0
Phvul.006G084300 Phaseolus vulgaris HOM05D007778 ORTHO05D009819 1.4e-06 57.8 147 33.3
Gohir.A07G078000 Gossypium hirsutum HOM05D007778 ORTHO05D009819 1.8e-06 57.4 115 33.0
MELO3C025069.2 Cucumis melo HOM05D007778 ORTHO05D009819 3.0e-06 56.6 90 42.2
HanXRQChr09g0270391 Helianthus annuus HOM05D007778 ORTHO05D009819 3.0e-06 56.6 78 46.2
Oeu032099.1 Olea europaea HOM05D007778 ORTHO05D009819 3.0e-06 56.6 93 38.7
Sed0002702 Sechium edule HOM05D007778 ORTHO05D009819 3.0e-06 56.6 94 41.5
Lsat_1_v5_gn_4_110701 Lactuca sativa HOM05D007778 ORTHO05D009819 5.2e-06 55.8 78 44.9
MBI06_g15669_MAGBIO Magnolia biondii HOM05D007778 ORTHO05D009819 5.2e-06 55.8 115 31.3


User provided reference genes

Program Settings