Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0057900 Salix brachista HOM05D004969 ORTHO05D006085 3.3e-125 451.8 242 100.0
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.1e-107 393.7 232 91.8
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.1e-91 340.5 238 80.3
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 2.6e-58 229.6 161 80.7
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 1.3e-44 184.1 231 53.7
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 6.3e-44 181.8 244 53.3
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 1.1e-43 181.0 280 50.0
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 4.5e-42 175.6 243 49.8
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 8.8e-38 161.4 244 47.1
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 4.8e-36 155.6 222 49.1
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 6.3e-36 155.2 158 58.2
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.4e-35 154.1 159 59.7
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 1.4e-35 154.1 220 50.0
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 1.6e-34 150.6 258 45.3
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 3.5e-34 149.4 215 49.8
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 7.7e-34 148.3 172 54.7
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 2.9e-33 146.4 265 44.2
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 5.0e-33 145.6 241 48.1
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 5.0e-33 145.6 265 44.2
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 2.5e-32 143.3 185 52.4
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 7.2e-32 141.7 241 46.9
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 3.6e-31 139.4 199 52.8
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 4.7e-31 139.0 237 44.7
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 4.7e-31 139.0 157 57.3
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 1.4e-30 137.5 194 51.5
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 1.8e-30 137.1 191 49.2
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 1.8e-30 137.1 251 45.0
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 2.3e-30 136.7 258 44.6
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 4.0e-30 136.0 244 45.9
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 1.1e-29 134.4 250 43.6
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 1.5e-29 134.0 194 48.5
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 3.3e-29 132.9 169 50.3
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 3.3e-29 132.9 178 52.2
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 1.3e-28 131.0 242 43.4
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 1.7e-28 130.6 193 47.2
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 2.8e-28 129.8 251 44.2
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 6.3e-28 128.6 255 42.7
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 8.2e-28 128.3 250 42.4
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 3.1e-27 126.3 241 41.9
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 3.1e-27 126.3 244 45.1
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 5.3e-27 125.6 244 44.7
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 9.1e-27 124.8 198 48.0
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 1.2e-26 124.4 217 45.2
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 2.0e-26 123.6 202 46.5
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 2.7e-26 123.2 218 45.4
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 4.5e-26 122.5 142 55.6
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 7.7e-26 121.7 255 41.6
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 2.2e-25 120.2 229 42.4
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 5.0e-25 119.0 191 47.6
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 8.5e-25 118.2 249 40.6
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 1.5e-24 117.5 255 38.4
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 4.2e-24 115.9 233 40.3
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 5.5e-24 115.5 169 50.3
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 1.6e-23 114.0 250 39.6
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 2.7e-23 113.2 210 41.4
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 2.7e-23 113.2 250 41.2
Hund31138 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.7e-23 113.2 268 38.4
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 4.7e-23 112.5 122 52.5
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 8.0e-23 111.7 261 39.5
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 8.0e-23 111.7 155 50.3
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 8.0e-23 111.7 201 43.8
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 1.0e-22 111.3 222 40.1
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 1.4e-22 110.9 252 38.5
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 1.4e-22 110.9 225 41.8
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 1.8e-22 110.5 205 41.5
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 3.0e-22 109.8 194 43.3
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 8.8e-22 108.2 277 37.9
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 8.8e-22 108.2 277 37.9
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 1.5e-21 107.5 250 38.4
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 2.0e-21 107.1 221 39.8
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 4.4e-21 105.9 217 44.2
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 5.7e-21 105.5 156 46.2
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.3e-20 104.4 215 43.3
Hund16636 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.7e-20 104.0 268 36.9
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 2.2e-20 103.6 225 40.9
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 2.2e-20 103.6 192 44.8
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 3.7e-20 102.8 171 46.8
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 8.3e-20 101.7 250 38.4
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 1.1e-19 101.3 260 37.7
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.1e-19 101.3 225 40.9
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.4e-19 100.9 215 42.8
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 2.4e-19 100.1 164 49.4
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 7.0e-19 98.6 166 45.8
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 1.2e-18 97.8 162 44.4
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 2.0e-18 97.1 137 46.0
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 1.0e-17 94.7 286 35.7
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 1.0e-17 94.7 251 37.8
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 1.3e-17 94.4 171 42.1
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 8.5e-17 91.7 295 33.9
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 1.5e-16 90.9 173 41.6
THA.LOC104802935 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 1.5e-16 90.9 173 41.6
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 2.5e-16 90.1 166 44.6
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 4.2e-16 89.4 124 49.2
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 9.4e-16 88.2 264 36.0
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 9.4e-16 88.2 264 36.0
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 2.1e-15 87.0 272 35.3
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 3.6e-15 86.3 258 36.0
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 6.1e-15 85.5 174 43.1
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 8.0e-15 85.1 148 47.3
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 1.0e-14 84.7 268 34.7
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 1.0e-14 84.7 268 34.7
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 1.0e-14 84.7 130 45.4
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 1.4e-14 84.3 245 33.9
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 5.2e-14 82.4 231 39.0
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 8.8e-14 81.6 148 44.6
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 8.8e-14 81.6 261 36.0
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 4.4e-13 79.3 217 34.6
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 7.5e-13 78.6 269 33.1
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 7.5e-13 78.6 274 34.7
Haze_10772 Corylus avellana HOM05D004969 ORTHO05D006085 2.2e-12 77.0 75 62.7
MD02G1236200 Malus domestica HOM05D005192 ORTHO05D006023 4.9e-12 75.9 96 47.9
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 1.8e-11 73.9 263 32.3
CARHR196590 Cardamine hirsuta HOM05D004969 ORTHO05D006085 3.8e-09 66.2 138 39.9
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.5e-08 64.3 106 48.1
HPP92_017745 Vanilla planifolia HOM05D004969 ORTHO05D006085 5.6e-08 62.4 133 36.1
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 8.0e-07 58.5 101 44.6
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 1.0e-06 58.2 99 49.5
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 1.8e-06 57.4 151 37.1
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 2.3e-06 57.0 38 71.1
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 4.0e-06 56.2 86 39.5
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 4.0e-06 56.2 84 51.2
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 8.9e-06 55.1 182 32.4


User provided reference genes

Program Settings