Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 5.4e-73 277.7 154 100.0
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 8.0e-69 263.8 151 95.4
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.4e-57 225.7 150 80.7
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 9.2e-57 223.8 150 78.7
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 9.2e-57 223.8 150 80.0
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.6e-56 223.0 150 78.7
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 2.0e-56 222.6 151 81.5
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 1.1e-54 216.9 150 77.3
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 1.9e-54 216.1 150 78.0
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 2.5e-54 215.7 150 78.0
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 5.6e-54 214.5 150 79.3
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 6.1e-53 211.1 151 77.5
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 1.4e-52 209.9 150 76.0
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 2.0e-51 206.1 135 80.7
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 3.7e-50 201.8 154 72.7
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 1.1e-49 200.3 164 72.0
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 1.9e-49 199.5 154 70.8
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 1.9e-49 199.5 154 70.8
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 1.6e-48 196.4 151 68.9
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 4.6e-48 194.9 150 68.7
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 6.0e-48 194.5 149 73.2
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 1.7e-47 193.0 153 68.0
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 1.1e-46 190.3 156 69.2
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 1.5e-46 189.9 151 68.2
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 2.5e-46 189.1 152 69.1
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 4.3e-46 188.3 143 72.7
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 7.3e-46 187.6 150 72.0
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.2e-45 186.8 150 67.3
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 1.2e-45 186.8 152 69.1
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 2.1e-45 186.0 150 68.7
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 2.1e-45 186.0 134 77.6
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 2.8e-45 185.7 153 68.0
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 4.7e-45 184.9 153 70.6
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 6.2e-45 184.5 155 63.9
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 6.2e-45 184.5 155 63.9
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 8.1e-45 184.1 172 63.4
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 1.1e-44 183.7 153 68.6
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.1e-44 183.7 146 69.9
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 1.1e-44 183.7 152 67.1
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 1.4e-44 183.3 151 64.9
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 1.4e-44 183.3 158 67.1
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 2.3e-44 182.6 141 69.5
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 3.1e-44 182.2 154 64.3
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 3.1e-44 182.2 154 64.3
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 4.0e-44 181.8 161 64.6
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.0e-44 181.8 161 64.6
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 6.8e-44 181.0 148 67.6
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 1.2e-43 180.3 154 63.6
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 1.5e-43 179.9 153 67.3
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.5e-43 179.9 137 69.3
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.5e-43 179.9 160 64.4
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 3.4e-43 178.7 158 68.4
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 4.4e-43 178.3 141 67.4
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 4.4e-43 178.3 133 74.4
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 5.8e-43 177.9 152 66.4
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 5.8e-43 177.9 130 70.8
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 7.5e-43 177.6 154 65.6
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 9.8e-43 177.2 164 65.9
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.3e-42 176.8 160 67.5
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 1.3e-42 176.8 158 64.6
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 2.9e-42 175.6 150 65.3
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 2.9e-42 175.6 141 68.1
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 2.9e-42 175.6 145 68.3
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 3.7e-42 175.3 150 64.0
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 1.1e-41 173.7 160 62.5
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 1.4e-41 173.3 147 67.3
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 2.4e-41 172.6 150 62.0
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 6.0e-40 167.9 142 71.8
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 6.0e-40 167.9 142 71.8
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 1.0e-39 167.2 141 69.5
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 1.7e-39 166.4 141 70.2
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 3.9e-39 165.2 150 62.0
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 3.9e-39 165.2 165 61.8
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 6.6e-39 164.5 150 60.7
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 1.9e-38 162.9 166 63.3
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 1.9e-38 162.9 142 70.4
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 1.9e-38 162.9 150 64.7
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 2.5e-38 162.5 150 62.0
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 4.3e-38 161.8 96 84.4
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 9.5e-38 160.6 151 61.6
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 2.8e-37 159.1 149 60.4
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 6.2e-37 157.9 161 62.1
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 1.1e-36 157.1 163 56.4
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 1.8e-36 156.4 171 60.8
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 2.3e-36 156.0 150 58.7
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 2.3e-36 156.0 150 58.7
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 2.3e-36 156.0 150 58.7
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 2.3e-36 156.0 150 58.7
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 2.3e-36 156.0 156 57.7
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 2.0e-35 152.9 163 59.5
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 2.4e-33 146.0 146 62.3
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 7.1e-33 144.4 94 72.3
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 7.1e-33 144.4 150 56.7
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 1.6e-32 143.3 96 76.0
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 6.0e-32 141.4 144 59.0
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 1.9e-30 136.3 136 63.2
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 6.2e-29 131.3 150 50.7
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 5.2e-28 128.3 145 57.9
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 2.0e-27 126.3 180 42.8
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 2.0e-27 126.3 99 71.7
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 5.8e-27 124.8 137 54.7
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 2.9e-26 122.5 171 45.0
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 3.2e-25 119.0 131 52.7
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 4.2e-25 118.6 141 53.2
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.4e-25 118.2 145 50.3
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 7.1e-25 117.9 142 49.3
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 7.1e-25 117.9 145 49.0
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 1.2e-24 117.1 142 48.6
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.5e-24 115.5 144 51.4
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 4.6e-24 115.2 104 60.6
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 1.0e-23 114.0 82 73.2
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.7e-23 113.2 84 67.9
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 3.0e-23 112.5 133 50.4
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 1.1e-22 110.5 141 48.9
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 6.9e-20 101.3 120 55.8
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 1.2e-19 100.5 96 58.3
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 9.9e-19 97.4 107 48.6
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.3e-18 97.1 102 54.9
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 8.4e-18 94.4 137 45.3
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 1.4e-17 93.6 107 50.5
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 6.0e-16 88.2 60 75.0
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 9.6e-14 80.9 106 51.9
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 9.9e-11 70.9 134 39.6
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 3.8e-10 68.9 69 55.1
PRCOL_00005394 Prasinoderma coloniale HOM05D006168 ORTHO05D007602 1.9e-06 56.6 95 38.9
C03p41350 Brassica napus HOM05D006168 ORTHO05D007602 4.3e-06 55.5 107 40.2


User provided reference genes

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