Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 3.0e-82 308.5 162 100.0
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 3.3e-41 172.2 162 66.0
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 3.6e-27 125.6 151 51.7
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 4.0e-26 122.1 146 52.1
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 5.2e-26 121.7 160 47.5
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 5.2e-26 121.7 145 53.8
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 6.7e-26 121.3 156 48.7
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 8.8e-26 120.9 162 48.1
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 1.5e-25 120.2 168 48.8
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 1.5e-25 120.2 162 48.1
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 4.4e-25 118.6 156 50.0
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 3.7e-24 115.5 148 48.6
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 6.3e-24 114.8 160 45.6
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 6.3e-24 114.8 162 46.3
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 1.1e-23 114.0 154 46.8
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 1.8e-23 113.2 154 47.4
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.8e-23 113.2 154 47.4
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.8e-23 113.2 154 47.4
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 2.4e-23 112.8 152 47.4
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 2.4e-23 112.8 159 48.4
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.4e-23 112.8 148 46.6
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 3.1e-23 112.5 154 48.7
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 4.1e-23 112.1 159 47.2
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 4.1e-23 112.1 148 45.9
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 5.3e-23 111.7 154 46.1
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 9.1e-23 110.9 147 48.3
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 1.6e-22 110.2 160 45.0
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.0e-22 109.8 151 47.0
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 2.0e-22 109.8 153 46.4
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 2.7e-22 109.4 162 44.4
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 3.5e-22 109.0 154 45.5
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 3.5e-22 109.0 158 43.0
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 4.5e-22 108.6 146 48.6
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 5.9e-22 108.2 154 48.7
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 5.9e-22 108.2 153 48.4
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 5.9e-22 108.2 147 46.9
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 7.7e-22 107.8 151 42.4
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 7.7e-22 107.8 142 50.0
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 1.3e-21 107.1 152 46.7
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 2.2e-21 106.3 161 41.0
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 2.9e-21 105.9 147 47.6
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 2.9e-21 105.9 142 50.0
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 2.9e-21 105.9 153 45.1
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 3.8e-21 105.5 153 42.5
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 5.0e-21 105.1 69 78.3
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 5.0e-21 105.1 147 45.6
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 6.5e-21 104.8 148 47.3
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 8.5e-21 104.4 153 46.4
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 8.5e-21 104.4 153 46.4
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 8.5e-21 104.4 152 46.1
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 1.1e-20 104.0 151 42.4
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 1.1e-20 104.0 152 42.1
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 1.1e-20 104.0 79 72.2
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 1.5e-20 103.6 146 43.8
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 1.5e-20 103.6 160 43.8
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 1.9e-20 103.2 153 41.8
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 1.9e-20 103.2 152 44.1
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 2.5e-20 102.8 147 43.5
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 2.5e-20 102.8 147 44.9
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 2.5e-20 102.8 158 40.5
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 3.2e-20 102.4 149 44.3
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 3.2e-20 102.4 160 43.1
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 3.2e-20 102.4 158 40.5
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 5.5e-20 101.7 159 40.3
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 7.2e-20 101.3 156 42.3
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 1.2e-19 100.5 156 42.3
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 1.2e-19 100.5 153 42.5
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 1.2e-19 100.5 73 72.6
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 1.2e-19 100.5 144 45.1
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.6e-19 100.1 155 41.3
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 1.6e-19 100.1 155 43.2
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 1.6e-19 100.1 154 45.5
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 1.6e-19 100.1 153 41.8
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 2.7e-19 99.4 150 42.7
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 3.6e-19 99.0 74 70.3
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 8.0e-19 97.8 151 41.1
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 8.0e-19 97.8 151 41.1
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 1.0e-18 97.4 155 40.6
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 1.0e-18 97.4 152 43.4
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 1.4e-18 97.1 152 42.1
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 1.8e-18 96.7 151 40.4
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 1.8e-18 96.7 146 42.5
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 2.3e-18 96.3 76 65.8
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 3.0e-18 95.9 161 39.1
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 3.0e-18 95.9 82 62.2
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 5.2e-18 95.1 78 62.8
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 6.8e-18 94.7 151 39.7
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 4.4e-17 92.0 163 39.9
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 5.7e-17 91.7 59 78.0
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 5.7e-17 91.7 154 39.0
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 7.5e-17 91.3 62 75.8
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 1.1e-15 87.4 151 38.4
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 3.1e-15 85.9 181 35.4
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 7.7e-14 81.3 104 47.1
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 1.3e-13 80.5 162 37.0
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.9e-12 76.6 151 34.4
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 2.7e-11 72.8 80 53.8
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 3.0e-10 69.3 153 34.0
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 4.0e-10 68.9 152 35.5
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 5.4e-07 58.5 67 44.8


User provided reference genes

Program Settings