Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0026700 Salix brachista HOM05D007781 ORTHO05D009769 2.0e-53 212.6 146 100.0
Potri.004G043100 Populus trichocarpa HOM05D007781 ORTHO05D009769 1.1e-30 137.1 146 80.8
Duzib235G1462 Durio zibethinus HOM05D007781 ORTHO05D009769 2.8e-23 112.5 129 63.6
CiPaw.09G059400 Carya illinoinensis HOM05D007781 ORTHO05D009769 1.5e-21 106.7 150 61.3
TAR627G0113 Trochodendron aralioides HOM05D007781 ORTHO05D009769 2.6e-21 105.9 131 64.1
Ciclev10017149m.g Citrus clementina HOM05D007781 ORTHO05D009769 3.4e-21 105.5 133 63.2
Hma1.2p1_0126F.1_g059410 Hydrangea macrophylla HOM05D007781 ORTHO05D009769 1.0e-20 104.0 135 61.5
Manes.16G027000 Manihot esculenta HOM05D007781 ORTHO05D009769 1.3e-20 103.6 99 78.8
CsaV3_1G012280 Cucumis sativus L. HOM05D007781 ORTHO05D009769 2.5e-19 99.4 135 58.5
MD05G1313200 Malus domestica HOM05D007781 ORTHO05D009769 2.5e-19 99.4 98 74.5
ClCG03G006020 Citrullus lanatus HOM05D007781 ORTHO05D009769 4.2e-19 98.6 131 61.8
Sed0016416 Sechium edule HOM05D007781 ORTHO05D009769 5.5e-19 98.2 134 67.9
TPR.G12128 Trifolium pratense HOM05D007781 ORTHO05D009769 9.4e-19 97.4 135 56.3
MELO3C002600.2 Cucumis melo HOM05D007781 ORTHO05D009769 1.6e-18 96.7 141 57.4
MD10G1295400 Malus domestica HOM05D007781 ORTHO05D009769 1.6e-18 96.7 132 59.8
Gorai.009G169900 Gossypium raimondii HOM05D007781 ORTHO05D009769 3.6e-18 95.5 96 69.8
Prupe.4G046600 Prunus persica HOM05D007781 ORTHO05D009769 4.7e-18 95.1 137 60.6
Gohir.A05G161900 Gossypium hirsutum HOM05D007781 ORTHO05D009769 6.1e-18 94.7 94 71.3
Gohir.D05G164700 Gossypium hirsutum HOM05D007781 ORTHO05D009769 6.1e-18 94.7 94 71.3
Dinv40553 Davidia involucrata HOM05D007781 ORTHO05D009769 1.0e-17 94.0 90 77.8
FAN16G0963 Fragaria x ananassa HOM05D007781 ORTHO05D009769 1.0e-17 94.0 94 72.3
Aa31LG6G3610 Aethionema arabicum HOM05D007781 ORTHO05D009769 2.3e-17 92.8 128 60.2
FvH4_3g09310 Fragaria vesca HOM05D007781 ORTHO05D009769 2.3e-17 92.8 92 73.9
FAN11G2776 Fragaria x ananassa HOM05D007781 ORTHO05D009769 2.3e-17 92.8 92 73.9
FAN21G0375 Fragaria x ananassa HOM05D007781 ORTHO05D009769 2.3e-17 92.8 92 73.9
Lj4g0009430 Lotus japonicus HOM05D007781 ORTHO05D009769 3.0e-17 92.4 135 63.7
Psat7g113680 Pisum sativum HOM05D007781 ORTHO05D009769 3.0e-17 92.4 127 59.1
Thecc.06G188400 Theobroma cacao HOM05D007781 ORTHO05D009769 5.2e-17 91.7 92 70.7
THA.LOC104812795 Tarenaya hassleriana HOM05D007781 ORTHO05D009769 2.6e-16 89.4 89 79.8
COL.COLO4_31480 Corchorus olitorius HOM05D007781 ORTHO05D009769 7.4e-16 87.8 92 67.4
Haze_06475 Corylus avellana HOM05D007781 ORTHO05D009769 9.7e-16 87.4 97 70.1
PGR042G1810 Punica granatum HOM05D007781 ORTHO05D009769 9.7e-16 87.4 154 53.9
GSVIVG01003209001 Vitis vinifera HOM05D007781 ORTHO05D009769 9.7e-16 87.4 88 77.3
A08p15070 Brassica napus HOM05D007781 ORTHO05D009769 1.3e-15 87.0 87 75.9
C03p83160 Brassica napus HOM05D001541 ORTHO05D009769 1.3e-15 87.0 87 75.9
HPP92_027869 Vanilla planifolia HOM05D007781 ORTHO05D009769 1.7e-15 86.7 93 71.0
arahy.Tifrunner.gnm1.ann1.QC0LUE Arachis hypogaea HOM05D007781 ORTHO05D009769 2.2e-15 86.3 135 62.2
RcHm_v2.0_Chr5g0008291 Rosa chinensis HOM05D007781 ORTHO05D009769 2.2e-15 86.3 133 57.9
Sp7g19740 Schrenkiella parvula HOM05D007781 ORTHO05D009769 2.8e-15 85.9 93 74.2
arahy.Tifrunner.gnm1.ann1.KV0YZV Arachis hypogaea HOM05D007781 ORTHO05D009769 6.3e-15 84.7 130 65.4
CDE10G1000 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 6.3e-15 84.7 97 72.2
Glyma.07G196200 Glycine max HOM05D007781 ORTHO05D009769 1.1e-14 84.0 88 72.7
Hund21227 Selenicereus undatus HOM05D007781 ORTHO05D009769 1.1e-14 84.0 126 67.5
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 1.4e-14 83.6 87 75.9
BolC3t20599H Brassica oleracea HOM05D007781 ORTHO05D009769 1.4e-14 83.6 87 75.9
Sc17g0006220 Simmondsia chinensis HOM05D007781 ORTHO05D009769 1.4e-14 83.6 122 58.2
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 3.1e-14 82.4 86 77.9
CANSAT35G1759 Cannabis sativa HOM05D007781 ORTHO05D009769 4.1e-14 82.0 88 72.7
CARHR228320 Cardamine hirsuta HOM05D007781 ORTHO05D009769 4.1e-14 82.0 87 74.7
Thhalv10026412m.g Eutrema salsugineum HOM05D007781 ORTHO05D009769 4.1e-14 82.0 86 76.7
Lsat_1_v5_gn_7_21141 Lactuca sativa HOM05D007781 ORTHO05D009769 4.1e-14 82.0 105 66.7
Cc02_g13310 Coffea canephora HOM05D007781 ORTHO05D009769 5.3e-14 81.6 139 56.8
Eucgr.E03314 Eucalyptus grandis HOM05D007781 ORTHO05D009769 1.2e-13 80.5 92 70.7
Nn1g06568 Nelumbo nucifera HOM05D007781 ORTHO05D009769 1.6e-13 80.1 122 59.8
Phvul.002G234100 Phaseolus vulgaris HOM05D007781 ORTHO05D009769 1.6e-13 80.1 85 70.6
TWI38G0207 Tripterygium wilfordii HOM05D007781 ORTHO05D009769 2.0e-13 79.7 75 62.7
Nitab4.5_0007940g0030 Nicotiana tabacum HOM05D007781 ORTHO05D009769 2.6e-13 79.3 92 71.7
VMungo0251G3178 Vigna mungo HOM05D007781 ORTHO05D009769 2.6e-13 79.3 85 70.6
Nitab4.5_0003432g0040 Nicotiana tabacum HOM05D007781 ORTHO05D009769 4.5e-13 78.6 138 57.2
Actinidia05631 Actinidia chinensis HOM05D007781 ORTHO05D009769 7.7e-13 77.8 143 61.5
Ah.14g089440 Amaranthus hybridus HOM05D007781 ORTHO05D009769 7.7e-13 77.8 81 53.1
ECA236G0601 Erigeron canadensis HOM05D007781 ORTHO05D009769 3.8e-12 75.5 118 61.9
DCAR_028076 Daucus carota HOM05D007781 ORTHO05D009769 6.5e-12 74.7 71 49.3
AT4G21610 Arabidopsis thaliana HOM05D007781 ORTHO05D009769 1.5e-11 73.6 86 73.3
CDE10G0168 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 1.5e-11 73.6 82 75.6
HanXRQChr04g0124061 Helianthus annuus HOM05D007781 ORTHO05D009769 1.5e-11 73.6 82 79.3
AL7G32390 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.9e-11 73.2 86 72.1
Medtr4g088850 Medicago truncatula HOM05D007781 ORTHO05D009769 1.9e-11 73.2 86 54.7
PGSC0003DMG400029720 Solanum tuberosum HOM05D007781 ORTHO05D009769 1.9e-11 73.2 136 53.7
Peaxi162Scf00736g00429 Petunia axillaris HOM05D007781 ORTHO05D009769 3.2e-11 72.4 40 70.0
CAN.G1164.27 Capsicum annuum HOM05D007781 ORTHO05D009769 4.2e-11 72.0 130 54.6
Os01g0612700 Oryza sativa ssp. japonica HOM05D021202 ORTHO05D009769 4.2e-11 72.0 89 73.0
MSTRG.14698 Avicennia marina HOM05D007781 ORTHO05D009769 9.4e-11 70.9 86 70.9
Sopen02g023130 Solanum pennellii HOM05D007781 ORTHO05D009769 1.6e-10 70.1 136 52.9
Carub.0007s1977 Capsella rubella HOM05D007781 ORTHO05D009769 2.1e-10 69.7 86 72.1
Lalb_Chr16g0383721 Lupinus albus HOM05D007781 ORTHO05D009769 4.7e-10 68.6 81 72.8
Solyc02g078270.3 Solanum lycopersicum HOM05D007781 ORTHO05D009769 4.7e-10 68.6 138 54.3
Migut.H01490 Erythranthe guttata HOM05D007781 ORTHO05D009769 1.0e-09 67.4 128 51.6
PSO541G0656 Papaver somniferum HOM05D007781 ORTHO05D009769 1.0e-09 67.4 89 69.7
Aqoxy1G02434 Aquilegia oxysepala HOM05D007781 ORTHO05D009769 1.4e-09 67.0 92 65.2
PSO675G6168 Papaver somniferum HOM05D007781 ORTHO05D009769 2.3e-09 66.2 89 69.7
Oeu053970.1 Olea europaea HOM05D007781 ORTHO05D009769 3.0e-09 65.9 85 65.9
SHI01775 Sapria himalayana HOM05D007781 ORTHO05D009769 5.2e-09 65.1 40 70.0
CSS0040858 Camellia sinensis var. sinensis HOM05D007781 ORTHO05D009769 1.2e-08 63.9 38 65.8
SGA_v2.0_scaffold49G18292 Striga asiatica HOM05D007781 ORTHO05D009769 9.7e-08 60.8 82 67.1
unitig_744.g24534 Utricularia gibba HOM05D007781 ORTHO05D009769 1.7e-07 60.1 127 52.0
Gohir.A11G117400 Gossypium hirsutum HOM05D007781 ORTHO05D009769 4.1e-06 55.5 36 55.6
Cfa000439 Carpinus fangiana HOM05D007781 ORTHO05D009769 9.1e-06 54.3 97 36.1


User provided reference genes

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