Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 1.1e-72 276.6 145 100.0
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 7.0e-67 257.3 141 95.0
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 2.1e-63 245.7 141 90.1
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 4.4e-61 238.0 139 88.5
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 4.6e-58 228.0 137 84.7
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 8.6e-57 223.8 139 82.0
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 3.6e-55 218.4 137 82.5
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 3.6e-55 218.4 137 82.5
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 1.2e-53 213.4 137 80.3
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 1.2e-53 213.4 137 79.6
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 1.1e-51 206.8 137 78.1
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 5.4e-51 204.5 137 76.6
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 7.1e-51 204.1 147 73.5
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 7.1e-51 204.1 139 78.4
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 9.2e-51 203.8 137 75.9
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 3.5e-50 201.8 139 77.7
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 1.0e-49 200.3 139 76.3
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 1.3e-49 199.9 139 74.8
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 1.7e-49 199.5 127 80.3
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 2.3e-49 199.1 139 75.5
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 5.1e-49 198.0 137 75.2
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 5.1e-49 198.0 137 76.6
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 1.1e-48 196.8 140 75.0
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.1e-48 196.8 140 75.0
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.1e-48 196.8 140 75.0
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 1.5e-48 196.4 138 73.9
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 1.5e-48 196.4 137 73.0
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 1.9e-48 196.1 136 75.7
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.9e-48 196.1 139 74.1
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 2.5e-48 195.7 139 74.1
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.5e-48 195.7 137 76.6
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 2.5e-48 195.7 137 76.6
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 2.5e-48 195.7 137 76.6
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 3.3e-48 195.3 140 74.3
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 7.3e-48 194.1 140 73.6
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 7.3e-48 194.1 137 73.0
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 9.6e-48 193.7 137 75.2
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 1.2e-47 193.4 137 73.0
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.6e-47 193.0 137 75.2
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 2.8e-47 192.2 139 73.4
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 3.6e-47 191.8 140 75.0
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 4.7e-47 191.4 137 73.0
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 6.2e-47 191.0 140 72.9
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 8.1e-47 190.7 138 71.0
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 1.1e-46 190.3 137 70.1
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 1.4e-46 189.9 137 73.7
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 1.8e-46 189.5 140 72.1
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 2.4e-46 189.1 137 74.5
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 6.9e-46 187.6 137 72.3
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 9.0e-46 187.2 137 70.8
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 1.5e-45 186.4 140 71.4
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 3.4e-45 185.3 137 72.3
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 4.4e-45 184.9 137 73.0
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 4.4e-45 184.9 131 74.8
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 5.8e-45 184.5 137 72.3
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 7.6e-45 184.1 136 70.6
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 9.9e-45 183.7 130 74.6
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 9.9e-45 183.7 139 72.7
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 1.7e-44 183.0 139 72.7
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 2.9e-44 182.2 146 69.9
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 2.9e-44 182.2 139 71.9
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 2.9e-44 182.2 137 66.4
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 3.8e-44 181.8 137 70.8
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 4.9e-44 181.4 140 68.6
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 4.9e-44 181.4 140 68.6
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 6.4e-44 181.0 138 71.0
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 8.4e-44 180.6 137 72.3
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 1.1e-43 180.3 140 72.1
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 2.4e-43 179.1 139 69.1
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 3.2e-43 178.7 137 70.1
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 3.2e-43 178.7 137 70.1
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 3.2e-43 178.7 137 70.1
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 3.2e-43 178.7 137 70.1
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 3.2e-43 178.7 137 70.1
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 7.1e-43 177.6 137 69.3
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 7.1e-43 177.6 140 70.7
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 7.1e-43 177.6 137 70.1
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 7.1e-43 177.6 140 70.7
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 9.3e-43 177.2 139 69.8
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 1.6e-42 176.4 138 69.6
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.6e-42 176.4 137 66.4
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 2.1e-42 176.0 139 66.9
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 2.7e-42 175.6 137 69.3
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 2.7e-42 175.6 137 67.9
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 3.5e-42 175.3 137 70.1
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 4.6e-42 174.9 136 65.4
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.3e-41 173.3 137 67.2
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.7e-41 172.9 136 68.4
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 1.7e-41 172.9 137 70.1
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 2.3e-41 172.6 137 66.4
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 2.3e-41 172.6 130 72.3
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 3.0e-41 172.2 139 66.2
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 3.0e-41 172.2 139 69.8
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 6.6e-41 171.0 139 67.6
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 2.5e-40 169.1 131 72.5
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 3.3e-40 168.7 139 64.7
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 3.3e-40 168.7 139 64.7
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 3.3e-40 168.7 137 67.9
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 3.3e-40 168.7 137 67.2
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 3.3e-40 168.7 137 67.2
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 5.6e-40 167.9 148 65.5
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 5.6e-40 167.9 148 65.5
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 5.6e-40 167.9 114 76.3
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 7.3e-40 167.5 137 67.2
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 9.6e-40 167.2 137 67.2
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 9.6e-40 167.2 131 71.8
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 6.2e-39 164.5 137 61.3
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 8.1e-39 164.1 139 66.2
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 1.4e-38 163.3 137 65.0
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 1.4e-38 163.3 136 69.9
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 3.1e-38 162.2 137 64.2
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 9.0e-38 160.6 165 57.6
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 1.5e-37 159.8 137 65.0
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 9.9e-37 157.1 137 66.4
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 3.8e-36 155.2 111 71.2
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 4.9e-36 154.8 137 62.0
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 1.4e-35 153.3 140 56.4
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 2.4e-35 152.5 171 50.9
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 2.4e-35 152.5 171 50.9
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 4.2e-35 151.8 138 63.8
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 5.4e-35 151.4 128 68.8
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 1.6e-34 149.8 137 57.7
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 2.7e-34 149.1 139 61.2
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 3.5e-34 148.7 162 56.2
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 1.8e-33 146.4 130 64.6
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 3.0e-33 145.6 137 62.8
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 1.1e-32 143.7 111 70.3
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 2.8e-31 139.0 137 57.7
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 4.5e-29 131.7 133 58.6
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 7.6e-29 131.0 88 77.3
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 9.9e-29 130.6 142 53.5
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 2.9e-28 129.0 137 57.7
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 2.4e-27 125.9 141 50.4
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 2.4e-27 125.9 141 50.4
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 1.6e-26 123.2 83 73.5
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 4.6e-26 121.7 88 70.5
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 6.0e-26 121.3 83 75.9
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 6.0e-26 121.3 136 52.9
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 7.9e-26 120.9 111 64.0
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 5.1e-25 118.2 100 63.0
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 8.7e-25 117.5 88 65.9
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.9e-24 116.3 93 67.7
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 1.4e-22 110.2 79 70.9
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.4e-22 110.2 100 58.0
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 1.3e-17 93.6 73 65.8
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.5e-16 89.4 59 83.1
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 8.2e-15 84.3 84 58.3
CSS0040150 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.9e-11 73.2 67 58.2
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 1.8e-06 56.6 49 61.2
MCO02G174 Micromonas commoda HOM05D003782 ORTHO05D004361 6.9e-06 54.7 73 39.7


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