Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 2.1e-61 238.8 118 100.0
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 4.2e-17 91.7 223 31.4
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 8.7e-15 84.0 165 32.1
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 1.1e-14 83.6 165 35.8
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 3.3e-14 82.0 165 33.3
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 7.4e-14 80.9 223 28.7
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 9.6e-14 80.5 172 32.0
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 9.6e-14 80.5 165 33.3
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 6.2e-13 77.8 223 27.8
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 1.1e-12 77.0 169 31.4
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 1.8e-12 76.3 165 32.1
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 1.8e-12 76.3 165 30.9
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.8e-12 76.3 165 30.9
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 2.4e-12 75.9 165 32.1
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 2.4e-12 75.9 165 31.5
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 3.1e-12 75.5 165 32.1
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 4.0e-12 75.1 165 30.9
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 5.3e-12 74.7 165 29.7
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 6.9e-12 74.3 159 32.7
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 9.0e-12 73.9 169 29.6
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 9.0e-12 73.9 169 29.6
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 1.2e-11 73.6 224 27.2
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 1.5e-11 73.2 169 30.2
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 2.0e-11 72.8 165 31.5
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 2.6e-11 72.4 171 28.7
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 3.4e-11 72.0 151 32.5
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 3.4e-11 72.0 165 29.1
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 3.4e-11 72.0 172 30.2
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 3.4e-11 72.0 172 30.2
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 4.5e-11 71.6 165 30.3
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 4.5e-11 71.6 165 30.3
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 5.8e-11 71.2 165 29.7
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 7.6e-11 70.9 159 31.4
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 7.6e-11 70.9 165 29.1
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 7.6e-11 70.9 169 31.4
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 9.9e-11 70.5 165 29.1
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 9.9e-11 70.5 169 28.4
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 1.7e-10 69.7 169 28.4
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 1.7e-10 69.7 165 27.9
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 1.7e-10 69.7 165 29.7
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.7e-10 69.7 170 29.4
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.7e-10 69.7 169 29.6
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 2.2e-10 69.3 37 83.8
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 2.2e-10 69.3 165 29.1
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 2.9e-10 68.9 165 28.5
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 3.8e-10 68.6 223 25.1
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 3.8e-10 68.6 164 30.5
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 3.8e-10 68.6 165 29.7
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 3.8e-10 68.6 165 30.9
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 3.8e-10 68.6 102 37.3
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 3.8e-10 68.6 144 31.2
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 4.9e-10 68.2 169 27.8
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 4.9e-10 68.2 169 29.0
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 4.9e-10 68.2 165 30.3
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 6.4e-10 67.8 165 29.1
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 8.4e-10 67.4 223 24.2
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 8.4e-10 67.4 169 28.4
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.1e-09 67.0 198 26.8
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 1.4e-09 66.6 164 28.0
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.4e-09 66.6 164 28.0
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 3.2e-09 65.5 153 30.7
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 7.1e-09 64.3 165 28.5
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 9.3e-09 63.9 169 26.6
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 1.6e-08 63.2 169 27.2
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 2.1e-08 62.8 165 27.9
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 4.6e-08 61.6 165 27.9
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 6.0e-08 61.2 152 32.2
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 7.9e-08 60.8 45 64.4
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 7.9e-08 60.8 165 24.8
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.3e-07 60.1 163 27.0
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 1.8e-07 59.7 39 66.7
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 5.1e-07 58.2 39 66.7
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 6.7e-07 57.8 165 24.8
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 8.7e-07 57.4 165 26.7
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 1.5e-06 56.6 170 24.7
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 2.5e-06 55.8 39 64.1
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 2.5e-06 55.8 37 64.9
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.3e-06 55.1 158 25.9


User provided reference genes

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