Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 2.0e-130 469.2 244 100.0
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 2.5e-93 345.9 255 72.5
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 4.6e-87 325.1 255 69.8
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.5e-77 293.5 253 64.0
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 3.7e-52 209.1 248 51.6
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 5.5e-48 195.3 239 52.7
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 5.4e-43 178.7 252 46.0
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 8.3e-36 154.8 254 44.9
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 3.1e-35 152.9 268 43.3
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 3.1e-35 152.9 268 43.3
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 4.1e-35 152.5 251 47.4
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 5.4e-35 152.1 244 47.5
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 9.2e-35 151.4 271 43.5
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 9.2e-35 151.4 256 44.1
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 3.5e-34 149.4 293 39.6
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 4.5e-34 149.1 240 46.7
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 5.9e-34 148.7 253 41.1
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 7.8e-34 148.3 257 42.4
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 2.3e-33 146.7 272 42.3
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 2.9e-33 146.4 240 45.4
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.5e-32 144.1 266 42.1
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 2.5e-32 143.3 239 46.4
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 6.1e-31 138.7 250 42.8
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 6.1e-31 138.7 250 42.8
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 8.0e-31 138.3 248 41.5
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.0e-30 137.9 258 39.5
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.4e-30 137.5 251 41.8
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 2.3e-30 136.7 262 39.7
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 2.3e-30 136.7 264 39.8
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 8.9e-30 134.8 248 41.5
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.2e-29 134.4 281 40.2
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.5e-29 134.0 259 40.9
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 3.4e-29 132.9 261 39.1
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 4.4e-29 132.5 273 41.0
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 4.4e-29 132.5 248 41.1
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 4.4e-29 132.5 256 38.3
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.7e-28 130.6 243 39.1
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 2.9e-28 129.8 239 41.4
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 2.4e-27 126.7 243 39.9
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.1e-27 125.9 269 40.1
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 5.4e-27 125.6 239 41.8
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 5.4e-27 125.6 259 36.7
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 5.4e-27 125.6 260 38.8
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 9.2e-27 124.8 260 39.6
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.0e-26 123.6 267 40.1
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 2.0e-26 123.6 230 40.0
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 6.0e-26 122.1 246 41.5
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.0e-25 121.3 278 38.5
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.0e-25 121.3 278 38.5
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.3e-25 120.9 244 40.6
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 2.3e-25 120.2 252 41.3
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 3.0e-25 119.8 255 40.0
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 3.9e-25 119.4 275 35.6
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 5.0e-25 119.0 247 40.1
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 6.6e-25 118.6 248 39.9
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 6.6e-25 118.6 274 38.3
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.1e-24 117.9 242 39.3
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.5e-24 117.5 238 39.1
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 1.9e-24 117.1 237 39.2
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 1.9e-24 117.1 230 38.3
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 1.9e-24 117.1 240 37.5
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 1.9e-24 117.1 235 40.4
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 5.6e-24 115.5 267 37.5
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 7.3e-24 115.2 269 36.8
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 9.5e-24 114.8 248 37.9
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.2e-23 114.4 215 40.9
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 1.2e-23 114.4 254 38.6
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 2.8e-23 113.2 251 38.6
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.6e-23 112.8 244 40.2
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 6.2e-23 112.1 280 35.4
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 8.9e-22 108.2 233 36.9
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 1.5e-21 107.5 232 40.1
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 4.4e-21 105.9 295 32.9
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 4.4e-21 105.9 245 37.1
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 7.5e-21 105.1 233 36.5
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 1.3e-20 104.4 268 35.4
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 2.9e-20 103.2 242 37.6
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 6.4e-20 102.1 250 36.4
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 1.4e-19 100.9 240 35.8
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 2.4e-19 100.1 259 35.1
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.4e-19 100.1 270 34.4
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 3.2e-19 99.8 251 35.1
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 4.1e-19 99.4 238 36.6
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 5.4e-19 99.0 166 39.8
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 5.4e-19 99.0 242 36.0
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 7.0e-19 98.6 301 31.2
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.1e-18 97.1 231 39.0
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.1e-18 97.1 231 39.0
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 2.1e-18 97.1 150 41.3
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 2.7e-18 96.7 249 39.4
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 6.0e-18 95.5 139 43.9
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.3e-17 94.4 204 36.8
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.7e-17 94.0 253 38.7
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 5.1e-17 92.4 197 36.0
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 8.6e-17 91.7 299 31.1
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 2.5e-16 90.1 249 32.9
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 2.5e-16 90.1 215 35.8
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.3e-16 89.7 237 37.1
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 4.3e-16 89.4 242 36.0
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 5.6e-16 89.0 136 46.3
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 9.5e-16 88.2 239 33.1
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.2e-15 87.8 269 34.6
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 2.1e-15 87.0 272 33.8
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 1.1e-14 84.7 328 28.4
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 3.4e-13 79.7 319 31.0
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 3.4e-13 79.7 130 42.3
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 1.3e-12 77.8 185 35.7
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.7e-12 77.4 138 39.9
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 4.9e-12 75.9 234 32.1
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.1e-11 74.7 234 32.5
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 4.1e-11 72.8 186 38.2
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.1e-08 64.7 167 33.5
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.5e-08 64.3 141 36.9
Ah.09g236140 Amaranthus hybridus HOM05D006486 ORTHO05D007888 4.3e-08 62.8 341 29.3
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.6e-07 60.8 105 39.0
AL6G48620 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 3.6e-07 59.7 152 33.6
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.4e-06 57.8 263 29.3
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.2e-06 55.8 225 30.7


User provided reference genes

Program Settings