Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0014900 Salix brachista HOM05D010229 ORTHO05D012533 8.3e-108 393.7 190 100.0
Sabra04G0097800 Salix brachista HOM05D000004 ORTHO05D000002 9.3e-51 204.1 144 71.5
Sabra16G0085200 Salix brachista HOM05D000482 ORTHO05D000349 8.7e-49 197.6 98 99.0
Sabra15G0070300 Salix brachista HOM05D000004 ORTHO05D000002 9.6e-40 167.5 152 60.5
Sabra17G0030900 Salix brachista HOM05D001103 ORTHO05D000002 9.6e-40 167.5 152 60.5
Sabra16G0244800 Salix brachista HOM05D000004 ORTHO05D000002 1.8e-38 163.3 148 57.4
Sabra11G0133300 Salix brachista HOM05D000004 ORTHO05D000002 7.1e-35 151.4 153 54.2
Sabra04G0088500 Salix brachista HOM05D010229 ORTHO05D012533 3.1e-30 136.0 137 56.2
Dinv07775 Davidia involucrata HOM05D000004 ORTHO05D000002 2.2e-23 113.2 134 49.3
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 4.8e-23 112.1 134 48.5
TAR344G0004 Trochodendron aralioides HOM05D000004 ORTHO05D000002 9.4e-19 97.8 154 40.9
TWI77G0626 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.2e-13 80.9 105 41.0
Potri.003G026106 Populus trichocarpa HOM05D028484 ORTHO05D000002 2.6e-13 79.7 149 38.3
ClCG02G009860 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.3e-12 77.4 114 37.7
Sabra02G0102300 Salix brachista HOM05D010229 ORTHO05D012533 3.8e-12 75.9 136 40.4
Sabra10G0055600 Salix brachista HOM05D000004 ORTHO05D000002 5.0e-12 75.5 115 40.9
RcHm_v2.0_Chr3g0461881 Rosa chinensis HOM05D000004 ORTHO05D000002 8.5e-12 74.7 124 36.3
FvH4_4g14287 Fragaria vesca HOM05D000004 ORTHO05D000002 1.1e-11 74.3 137 40.1
Sabra05G0134300 Salix brachista HOM05D010229 ORTHO05D012533 1.4e-11 73.9 147 37.4
Manes.13G056002 Manihot esculenta HOM05D000004 ORTHO05D000002 4.2e-11 72.4 160 36.9
Atru.chr6.119 Acer truncatum HOM05D000004 ORTHO05D000002 5.5e-11 72.0 99 43.4
EL10Ac3g06996 Beta vulgaris HOM05D008382 ORTHO05D000563 5.5e-11 72.0 123 40.7
PGR004G0370 Punica granatum HOM05D000004 ORTHO05D000002 5.5e-11 72.0 101 36.6
Sabra17G0116100 Salix brachista HOM05D010229 ORTHO05D012533 5.5e-11 72.0 124 41.9
Sabra07G0100900 Salix brachista HOM05D010229 ORTHO05D012533 7.2e-11 71.6 124 41.9
FvH4_5g21912 Fragaria vesca HOM05D008382 ORTHO05D000563 9.4e-11 71.2 139 38.8
PGR029G0004 Punica granatum HOM05D000004 ORTHO05D000002 9.4e-11 71.2 101 36.6
EL10Ac2g03748 Beta vulgaris HOM05D000004 ORTHO05D000002 1.2e-10 70.9 128 37.5
EL10As2g23215 Beta vulgaris HOM05D008382 ORTHO05D000002 1.2e-10 70.9 125 37.6
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 1.2e-10 70.9 163 28.8
Manes.06G054150 Manihot esculenta HOM05D000004 ORTHO05D000002 1.6e-10 70.5 143 35.7
PGR119G2524 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-10 70.5 106 38.7
TWI59G0882 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.7e-10 69.7 150 34.0
Atru.chr1.2265 Acer truncatum HOM05D000004 ORTHO05D000002 1.8e-09 67.0 133 37.6
Manes.14G147049 Manihot esculenta HOM05D000004 ORTHO05D000002 1.8e-09 67.0 150 34.0
Sabra01G0176600 Salix brachista HOM05D010229 ORTHO05D012533 1.8e-09 67.0 105 41.9
Sabra06G0132300 Salix brachista HOM05D010229 ORTHO05D012533 1.8e-09 67.0 152 35.5
Sabra18G0040900 Salix brachista HOM05D000012 ORTHO05D012533 1.8e-09 67.0 113 40.7
Sabra01G0113300 Salix brachista HOM05D010229 ORTHO05D012533 2.3e-09 66.6 100 43.0
Manes.10G049950 Manihot esculenta HOM05D000004 ORTHO05D000002 3.9e-09 65.9 150 33.3
Sabra19G0010300 Salix brachista HOM05D010229 ORTHO05D012533 5.1e-09 65.5 132 38.6
BcaB04g18772 Brassica carinata HOM05D008382 ORTHO05D011503 6.7e-09 65.1 120 35.8
EL10Ac2g03002 Beta vulgaris HOM05D000004 ORTHO05D000002 1.1e-08 64.3 156 32.1
QL08p046141 Quercus lobata HOM05D000716 ORTHO05D004822 1.1e-08 64.3 150 36.0
TAR135G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 1.1e-08 64.3 159 35.8
Manes.10G137502 Manihot esculenta HOM05D000004 ORTHO05D000002 1.5e-08 63.9 150 32.7
PGR083G0982 Punica granatum HOM05D000004 ORTHO05D000002 1.5e-08 63.9 154 33.8
Manes.16G058925 Manihot esculenta HOM05D000004 ORTHO05D000002 2.0e-08 63.5 127 33.9
Rhsim13G0171100 Rhododendron simsii HOM05D000101 ORTHO05D013107 2.0e-08 63.5 73 50.7
Sabra04G0074700 Salix brachista HOM05D028484 ORTHO05D050754 2.0e-08 63.5 113 38.9
Sabra16G0314600 Salix brachista HOM05D010229 ORTHO05D000002 2.0e-08 63.5 88 38.6
TPR.G23161 Trifolium pratense HOM05D008382 ORTHO05D000002 2.6e-08 63.2 166 31.3
EL10Ac1g00890 Beta vulgaris HOM05D008382 ORTHO05D000002 3.3e-08 62.8 102 39.2
FvH4_3g10372 Fragaria vesca HOM05D001538 ORTHO05D000007 4.4e-08 62.4 125 36.0
Sabra01G0131100 Salix brachista HOM05D010229 ORTHO05D012533 4.4e-08 62.4 136 38.2
Manes.16G085001 Manihot esculenta HOM05D000004 ORTHO05D000002 5.7e-08 62.0 102 37.3
PSO423G0076 Papaver somniferum HOM05D000004 ORTHO05D000002 5.7e-08 62.0 129 32.6
PSO782G4047 Papaver somniferum HOM05D000004 ORTHO05D000002 5.7e-08 62.0 146 34.2
PGR031G2743 Punica granatum HOM05D000004 ORTHO05D000002 5.7e-08 62.0 97 37.1
PSO067G0006 Papaver somniferum HOM05D000004 ORTHO05D000002 7.4e-08 61.6 146 34.2
PSO063G1387 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-07 60.5 146 34.2
PSO170G4585 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-07 60.5 156 31.4
PSO063G7638 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-07 60.1 150 34.0
PSO832G0610 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-07 60.1 146 33.6
FvH4_3g27861 Fragaria vesca HOM05D000004 ORTHO05D000002 2.8e-07 59.7 98 40.8
PSO210G3864 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-07 59.3 153 31.4
PGR119G0732 Punica granatum HOM05D000004 ORTHO05D000002 3.7e-07 59.3 157 29.9
ECA248G0299 Erigeron canadensis HOM05D000006 ORTHO05D000091 4.8e-07 58.9 94 37.2
PSO017G2500 Papaver somniferum HOM05D000004 ORTHO05D000002 4.8e-07 58.9 146 34.9
FvH4_4g12742 Fragaria vesca HOM05D000004 ORTHO05D000002 6.3e-07 58.5 116 35.3
ECA238G2594 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.2e-07 58.2 96 37.5
ECA246G1906 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-06 57.8 134 32.8
FvH4_3g34591 Fragaria vesca HOM05D008382 ORTHO05D000563 1.1e-06 57.8 129 38.0
PSO384G1745 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.8 153 31.4
PSO675G8805 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.8 101 38.6
FvH4_4g24071 Fragaria vesca HOM05D008382 ORTHO05D000563 1.4e-06 57.4 129 37.2
FvH4_6g32372 Fragaria vesca HOM05D008382 ORTHO05D000563 1.4e-06 57.4 122 36.9
PSO675G7374 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-06 57.0 128 36.7
TWI18G1168 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.4e-06 56.6 143 33.6
EL10Ac6g14458 Beta vulgaris HOM05D008382 ORTHO05D011503 3.1e-06 56.2 148 31.8
TWI60G1627 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.1e-06 56.2 141 37.6
BolC3t20667H Brassica oleracea HOM05D000004 ORTHO05D000563 4.1e-06 55.8 145 29.7
ClCG09G013120 Citrullus lanatus HOM05D000004 ORTHO05D009660 4.1e-06 55.8 115 34.8
MELO3C029205.2 Cucumis melo HOM05D010229 ORTHO05D012533 4.1e-06 55.8 94 38.3
ECA247G0472 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-06 55.5 104 37.5
HanXRQChr16g0519861 Helianthus annuus HOM05D000004 ORTHO05D000002 5.3e-06 55.5 123 35.0
PSO675G1879 Papaver somniferum HOM05D000004 ORTHO05D000002 5.3e-06 55.5 152 32.9
THA.LOC104822532 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.3e-06 55.5 148 34.5
Atru.chr11.824 Acer truncatum HOM05D010229 ORTHO05D012533 7.0e-06 55.1 63 44.4
PSO063G0930 Papaver somniferum HOM05D000004 ORTHO05D000002 7.0e-06 55.1 159 32.7
AUR62024270 Chenopodium quinoa HOM05D008382 ORTHO05D000002 9.1e-06 54.7 130 31.5
PSO781G0180 Papaver somniferum HOM05D000004 ORTHO05D000002 9.1e-06 54.7 106 37.7
Potri.001G006850 Populus trichocarpa HOM05D028484 ORTHO05D000563 9.1e-06 54.7 103 38.8
Sabra01G0174000 Salix brachista HOM05D010229 ORTHO05D012533 9.1e-06 54.7 137 32.8
Sabra07G0073700 Salix brachista HOM05D001694 ORTHO05D000248 9.1e-06 54.7 77 39.0
Sabra11G0012300 Salix brachista HOM05D010229 ORTHO05D012533 9.1e-06 54.7 137 32.8
SGA_v2.0_scaffold217G42416 Striga asiatica HOM05D000004 ORTHO05D000002 9.1e-06 54.7 98 35.7
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 9.1e-06 54.7 148 34.5
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 9.1e-06 54.7 148 34.5


User provided reference genes

Program Settings