Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 8.7e-59 230.3 137 100.0
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 5.0e-22 108.2 76 72.4
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 3.0e-19 99.0 77 68.8
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 2.4e-16 89.4 75 58.7
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 1.2e-15 87.0 75 57.3
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 6.5e-14 81.3 83 50.6
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 7.2e-13 77.8 76 52.6
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 1.6e-12 76.6 96 44.8
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 1.6e-12 76.6 75 48.0
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 3.6e-12 75.5 71 67.6
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 1.0e-11 73.9 75 48.0
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 1.0e-11 73.9 75 52.0
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 1.8e-11 73.2 76 50.0
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 3.0e-11 72.4 75 50.7
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 3.0e-11 72.4 75 52.0
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 3.0e-11 72.4 75 45.3
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 4.0e-11 72.0 75 50.7
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 5.2e-11 71.6 75 49.3
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 6.8e-11 71.2 76 46.1
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.2e-10 70.5 76 68.4
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.5e-10 70.1 76 46.1
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 2.0e-10 69.7 75 42.7
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 2.6e-10 69.3 75 44.0
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 3.4e-10 68.9 75 48.0
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 3.4e-10 68.9 76 43.4
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 4.4e-10 68.6 75 48.0
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 5.7e-10 68.2 76 46.1
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 5.7e-10 68.2 76 44.7
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 1.3e-09 67.0 75 45.3
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 2.2e-09 66.2 75 45.3
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 4.8e-09 65.1 76 42.1
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 4.8e-09 65.1 75 49.3
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 6.3e-09 64.7 75 44.0
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 8.3e-09 64.3 75 61.3
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 8.3e-09 64.3 75 45.3
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 1.8e-08 63.2 76 46.1
Haze_06807 Corylus avellana HOM05D007037 ORTHO05D006691 2.4e-08 62.8 76 67.1
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 3.1e-08 62.4 77 42.9
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 3.1e-08 62.4 75 45.3
Cfa000214 Carpinus fangiana HOM05D007037 ORTHO05D006691 5.4e-08 61.6 76 65.8
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 5.4e-08 61.6 75 42.7
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 7.0e-08 61.2 75 42.7
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 9.1e-08 60.8 75 42.7
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 9.1e-08 60.8 81 43.2
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 1.6e-07 60.1 77 45.5
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 2.0e-07 59.7 75 42.7
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 2.7e-07 59.3 77 42.9
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 2.7e-07 59.3 72 45.8
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 4.5e-07 58.5 75 41.3
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 5.9e-07 58.2 75 40.0
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 1.3e-06 57.0 75 41.3
Rhsim02G0106600 Rhododendron simsii HOM05D007037 ORTHO05D006691 1.7e-06 56.6 88 61.4
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 1.7e-06 56.6 46 54.3
Medtr4g132230 Medicago truncatula HOM05D007037 ORTHO05D006691 2.3e-06 56.2 76 47.4
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 2.3e-06 56.2 48 64.6
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 3.8e-06 55.5 77 42.9
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 3.8e-06 55.5 77 42.9
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 5.0e-06 55.1 77 37.7
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 5.0e-06 55.1 75 37.3
vmacro15807 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 5.0e-06 55.1 89 56.2
Aqoxy4G01827 Aquilegia oxysepala HOM05D009550 ORTHO05D006691 6.6e-06 54.7 82 58.5
A06p08290 Brassica napus HOM05D007037 ORTHO05D006691 6.6e-06 54.7 58 51.7
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 6.6e-06 54.7 75 41.3
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 6.6e-06 54.7 77 40.3
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 6.6e-06 54.7 70 45.7
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 6.6e-06 54.7 76 47.4


User provided reference genes

Program Settings