Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0165000 Salix brachista HOM05D007392 ORTHO05D009181 1.1e-72 276.6 142 100.0
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 2.1e-55 219.2 118 95.8
Potri.001G003300 Populus trichocarpa HOM05D007392 ORTHO05D009181 1.3e-44 183.3 118 80.5
Sabra01G0002400 Salix brachista HOM05D007392 ORTHO05D009181 5.5e-40 167.9 124 72.6
GSVIVG01025476001 Vitis vinifera HOM05D007392 ORTHO05D009181 2.6e-34 149.1 120 66.7
Manes.15G109800 Manihot esculenta HOM05D007392 ORTHO05D009181 6.5e-33 144.4 124 66.1
CiPaw.13G177600 Carya illinoinensis HOM05D007392 ORTHO05D009181 4.0e-30 135.2 117 62.4
QL01p003594 Quercus lobata HOM05D007392 ORTHO05D009181 7.5e-29 131.0 118 61.9
Cfa009557 Carpinus fangiana HOM05D007392 ORTHO05D009181 1.3e-28 130.2 120 61.7
Actinidia16241 Actinidia chinensis HOM05D007392 ORTHO05D009181 1.1e-27 127.1 119 58.8
Ciclev10017000m.g Citrus clementina HOM05D007392 ORTHO05D009181 3.1e-27 125.6 132 54.5
Rhsim13G0233100 Rhododendron simsii HOM05D007392 ORTHO05D009181 2.0e-26 122.9 119 58.0
TWI34G1824 Tripterygium wilfordii HOM05D007392 ORTHO05D009181 2.7e-26 122.5 120 56.7
Dinv13477 Davidia involucrata HOM05D007392 ORTHO05D009181 3.5e-26 122.1 123 58.5
TAR623G1707 Trochodendron aralioides HOM05D007392 ORTHO05D009181 2.9e-25 119.0 120 55.8
Prupe.6G002800 Prunus persica HOM05D007392 ORTHO05D009181 3.2e-24 115.5 122 54.9
RcHm_v2.0_Chr5g0083851 Rosa chinensis HOM05D007392 ORTHO05D009181 9.4e-24 114.0 129 52.7
Oeu004754.1 Olea europaea HOM05D007392 ORTHO05D009181 3.6e-23 112.1 125 54.4
FvH4_3g45780 Fragaria vesca HOM05D007392 ORTHO05D009181 1.0e-22 110.5 123 52.8
PGR119G0135 Punica granatum HOM05D007392 ORTHO05D009181 4.0e-22 108.6 124 50.0
THA.LOC104810320 Tarenaya hassleriana HOM05D007392 ORTHO05D009181 8.8e-22 107.5 129 51.2
ECA233G2404 Erigeron canadensis HOM05D007392 ORTHO05D009181 1.2e-21 107.1 123 53.7
Peaxi162Scf00705g00062 Petunia axillaris HOM05D007392 ORTHO05D009181 2.6e-21 105.9 123 50.4
FAN11G3804 Fragaria x ananassa HOM05D007392 ORTHO05D009181 3.4e-21 105.5 123 52.8
Nn2g15869 Nelumbo nucifera HOM05D007392 ORTHO05D009181 3.4e-21 105.5 120 51.7
Nitab4.5_0006195g0060 Nicotiana tabacum HOM05D007392 ORTHO05D009181 3.4e-21 105.5 148 48.6
Aqoxy2G00525 Aquilegia oxysepala HOM05D007392 ORTHO05D009181 4.4e-21 105.1 117 51.3
Lsat_1_v5_gn_6_55560 Lactuca sativa HOM05D007392 ORTHO05D009181 1.7e-20 103.2 122 50.8
Eucgr.J01763 Eucalyptus grandis HOM05D007392 ORTHO05D009181 2.2e-20 102.8 119 46.2
PSO384G3152 Papaver somniferum HOM05D007392 ORTHO05D009181 2.8e-20 102.4 118 50.0
FAN25G2102 Fragaria x ananassa HOM05D007392 ORTHO05D009181 4.8e-20 101.7 121 48.8
Actinidia00905 Actinidia chinensis HOM05D007392 ORTHO05D009181 8.3e-20 100.9 118 52.5
Nitab4.5_0000551g0100 Nicotiana tabacum HOM05D007392 ORTHO05D009181 8.3e-20 100.9 117 53.0
Thhalv10021633m.g Eutrema salsugineum HOM05D007392 ORTHO05D009181 1.1e-19 100.5 146 45.2
FAN16G0802 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.1e-19 100.5 123 48.0
BcaB04g18766 Brassica carinata HOM05D007392 ORTHO05D009181 1.4e-19 100.1 131 46.6
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 1.4e-19 100.1 119 50.4
Cpa.g.sc119.37 Carica papaya HOM05D007392 ORTHO05D009181 1.8e-19 99.8 113 55.8
Carub.0003s1294 Capsella rubella HOM05D007392 ORTHO05D009181 2.4e-19 99.4 140 45.7
Sp3g11690 Schrenkiella parvula HOM05D007392 ORTHO05D009181 2.4e-19 99.4 147 44.9
MD03G1003200 Malus domestica HOM05D007392 ORTHO05D009181 5.4e-19 98.2 128 49.2
A01p40100 Brassica napus HOM05D007392 ORTHO05D009181 1.2e-18 97.1 133 48.9
BraA01t04052Z Brassica rapa HOM05D007392 ORTHO05D009181 1.2e-18 97.1 133 48.9
Cc01_g00150 Coffea canephora HOM05D007392 ORTHO05D009181 2.0e-18 96.3 124 50.0
Nn7g35849 Nelumbo nucifera HOM05D007392 ORTHO05D009181 2.0e-18 96.3 119 49.6
vmacro04261 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 2.0e-18 96.3 106 54.7
DCAR_032194 Daucus carota HOM05D007392 ORTHO05D009181 3.5e-18 95.5 151 40.4
CAN.G1834.12 Capsicum annuum HOM05D007392 ORTHO05D009181 4.5e-18 95.1 120 49.2
EL10Ac4g10390 Beta vulgaris HOM05D007392 ORTHO05D009181 7.7e-18 94.4 131 45.0
C01p51590 Brassica napus HOM05D007392 ORTHO05D009181 7.7e-18 94.4 134 47.0
BolC1t05102H Brassica oleracea HOM05D007392 ORTHO05D009181 7.7e-18 94.4 134 47.0
Sc09g0000040 Simmondsia chinensis HOM05D007392 ORTHO05D009181 1.0e-17 94.0 143 46.9
MELO3C015574.2 Cucumis melo HOM05D007392 ORTHO05D009181 2.3e-17 92.8 122 47.5
CsaV3_1G041630 Cucumis sativus L. HOM05D007392 ORTHO05D009181 2.3e-17 92.8 122 47.5
MD11G1003000 Malus domestica HOM05D007392 ORTHO05D009181 2.9e-17 92.4 129 45.0
Oeu059652.1 Olea europaea HOM05D007392 ORTHO05D009181 3.8e-17 92.0 121 49.6
PGSC0003DMG402032165 Solanum tuberosum HOM05D007392 ORTHO05D009181 3.8e-17 92.0 120 49.2
AT3G13480 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 8.6e-17 90.9 142 45.8
CANSAT11G0973 Cannabis sativa HOM05D007392 ORTHO05D009181 1.1e-16 90.5 121 49.6
A05p36050 Brassica napus HOM05D007392 ORTHO05D009181 5.5e-16 88.2 141 43.3
CARHR088140 Cardamine hirsuta HOM05D007392 ORTHO05D009181 5.5e-16 88.2 139 43.2
Sopen01g001550 Solanum pennellii HOM05D007392 ORTHO05D009181 1.2e-15 87.0 122 49.2
BcaC05g29176 Brassica carinata HOM05D007392 ORTHO05D009181 2.1e-15 86.3 145 42.8
MSTRG.20935 Avicennia marina HOM05D000287 ORTHO05D000319 6.1e-15 84.7 122 43.4
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 8.0e-15 84.3 131 41.2
Solyc01g005530.3 Solanum lycopersicum HOM05D007392 ORTHO05D009181 8.0e-15 84.3 122 47.5
vmacro23199 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 8.0e-15 84.3 96 54.2
ClCG03G014560 Citrullus lanatus HOM05D007392 ORTHO05D009181 1.0e-14 84.0 116 46.6
C03p46400 Brassica napus HOM05D007392 ORTHO05D009181 2.3e-14 82.8 141 39.0
C03p46430 Brassica napus HOM05D007392 ORTHO05D009181 4.0e-14 82.0 109 45.9
BcaC01g03991 Brassica carinata HOM05D007392 ORTHO05D009181 5.2e-14 81.6 121 43.0
BraA03t12977Z Brassica rapa HOM05D007392 ORTHO05D009181 6.8e-14 81.3 150 40.7
AL3G25390 Arabidopsis lyrata HOM05D007392 ORTHO05D009181 1.5e-13 80.1 140 40.7
C05p54400 Brassica napus HOM05D007392 ORTHO05D009181 1.7e-12 76.6 150 35.3
HPP92_024836 Vanilla planifolia HOM05D007392 ORTHO05D009181 2.8e-12 75.9 119 44.5
HPP92_026624 Vanilla planifolia HOM05D007392 ORTHO05D009181 3.7e-12 75.5 119 44.5
Migut.D02593 Erythranthe guttata HOM05D007392 ORTHO05D009181 6.3e-12 74.7 120 40.8
SGA_v2.0_scaffold6G03356 Striga asiatica HOM05D007392 ORTHO05D009181 6.3e-12 74.7 124 41.9
Migut.D02571 Erythranthe guttata HOM05D007392 ORTHO05D009181 1.8e-11 73.2 121 44.6
SalBow3G3897 Salvia bowleyana HOM05D007392 ORTHO05D009181 9.2e-11 70.9 121 38.8
Aa31LG8G680 Aethionema arabicum HOM05D007392 ORTHO05D009181 1.2e-10 70.5 123 38.2
SGA_v2.0_scaffold6G03313 Striga asiatica HOM05D007392 ORTHO05D009181 4.7e-07 58.5 120 40.0
BraA05t22411Z Brassica rapa HOM05D001472 ORTHO05D007811 1.4e-06 57.0 120 38.3
BolC5t34105H Brassica oleracea HOM05D001472 ORTHO05D007811 3.0e-06 55.8 119 35.3
HPP92_015638 Vanilla planifolia HOM05D007392 ORTHO05D009181 4.0e-06 55.5 117 40.2
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 5.2e-06 55.1 120 34.2


User provided reference genes

Program Settings