Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0164400 Salix brachista HOM05D004778 ORTHO05D005679 1.5e-59 232.6 116 100.0
Potri.003G220900 Populus trichocarpa HOM05D004778 ORTHO05D005679 1.7e-15 86.3 53 88.7
Cpa.g.sc119.43 Carica papaya HOM05D004778 ORTHO05D005679 1.8e-09 66.2 55 65.5
Cfa009564 Carpinus fangiana HOM05D004778 ORTHO05D005679 4.1e-09 65.1 54 70.4
Potri.019G035500 Populus trichocarpa HOM05D004778 ORTHO05D005679 2.0e-08 62.8 53 64.2
Potri.001G004100 Populus trichocarpa HOM05D004778 ORTHO05D005679 4.5e-08 61.6 53 67.9
Potri.013G057500 Populus trichocarpa HOM05D004778 ORTHO05D005679 4.5e-08 61.6 53 62.3
CiPaw.14G136700 Carya illinoinensis HOM05D004778 ORTHO05D005679 1.3e-07 60.1 53 58.5
Hma1.2p1_0152F.1_g067660 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 2.3e-07 59.3 49 63.3
Solyc01g005590.2 Solanum lycopersicum HOM05D004778 ORTHO05D005679 2.3e-07 59.3 55 58.2
PGSC0003DMG400032211 Solanum tuberosum HOM05D004778 ORTHO05D005679 2.3e-07 59.3 55 58.2
A03p56600 Brassica napus HOM05D004778 ORTHO05D005679 3.8e-07 58.5 53 54.7
C07p54800 Brassica napus HOM05D004778 ORTHO05D005679 5.0e-07 58.2 53 58.5
CARHR270190 Cardamine hirsuta HOM05D004778 ORTHO05D005679 5.0e-07 58.2 58 56.9
BcaC09g50690 Brassica carinata HOM05D004778 ORTHO05D005679 6.6e-07 57.8 53 52.8
C01p22170 Brassica napus HOM05D004778 ORTHO05D005679 6.6e-07 57.8 53 52.8
BolC1t02147H Brassica oleracea HOM05D004778 ORTHO05D005679 6.6e-07 57.8 53 52.8
PGSC0003DMG400008381 Solanum tuberosum HOM05D004778 ORTHO05D005679 6.6e-07 57.8 54 61.1
AL7G26630 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 8.6e-07 57.4 53 54.7
BolC7t45969H Brassica oleracea HOM05D004778 ORTHO05D005679 8.6e-07 57.4 53 56.6
Carub.0008s1702 Capsella rubella HOM05D004778 ORTHO05D005679 8.6e-07 57.4 54 57.4
Gohir.D13G103100 Gossypium hirsutum HOM05D004778 ORTHO05D005679 8.6e-07 57.4 53 56.6
AT4G26320 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 1.1e-06 57.0 53 54.7
Gohir.A13G099600 Gossypium hirsutum HOM05D004778 ORTHO05D005679 1.1e-06 57.0 53 56.6
AL8G32300 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 1.5e-06 56.6 54 55.6
Eucgr.K01501 Eucalyptus grandis HOM05D004778 ORTHO05D005679 1.5e-06 56.6 51 58.8
Manes.08G144900 Manihot esculenta HOM05D004778 ORTHO05D005679 1.5e-06 56.6 53 56.6
BcaNung02429 Brassica carinata HOM05D004778 ORTHO05D005679 1.9e-06 56.2 53 49.1
Carub.0007s1462 Capsella rubella HOM05D004778 ORTHO05D005679 1.9e-06 56.2 53 54.7
Aqoxy1G00473 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 2.5e-06 55.8 51 54.9
Gohir.D11G246400 Gossypium hirsutum HOM05D004778 ORTHO05D005679 2.5e-06 55.8 53 54.7
Sp6g18330 Schrenkiella parvula HOM05D004778 ORTHO05D005679 2.5e-06 55.8 54 55.6
A01p17570 Brassica napus HOM05D004778 ORTHO05D005679 3.3e-06 55.5 53 50.9
BraA01t01710Z Brassica rapa HOM05D004778 ORTHO05D005679 3.3e-06 55.5 53 50.9
BraA03t14730Z Brassica rapa HOM05D004778 ORTHO05D005679 3.3e-06 55.5 49 57.1
Manes.09G140700 Manihot esculenta HOM05D004778 ORTHO05D005679 3.3e-06 55.5 49 61.2
Duzib106G0337 Durio zibethinus HOM05D004778 ORTHO05D005679 4.2e-06 55.1 53 52.8
AT5G56540 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 5.5e-06 54.7 54 53.7
BcaNung06233 Brassica carinata HOM05D004778 ORTHO05D005679 5.5e-06 54.7 55 56.4
BolC5t34103H Brassica oleracea HOM05D004778 ORTHO05D005679 5.5e-06 54.7 55 56.4
BraA05t22399Z Brassica rapa HOM05D004778 ORTHO05D005679 5.5e-06 54.7 55 56.4
Thhalv10027232m.g Eutrema salsugineum HOM05D004778 ORTHO05D005679 5.5e-06 54.7 53 49.1
MD03G1004000 Malus domestica HOM05D004778 ORTHO05D005679 5.5e-06 54.7 54 59.3
Nn2g15855 Nelumbo nucifera HOM05D004778 ORTHO05D005679 5.5e-06 54.7 53 52.8
Aa31LG3G12430 Aethionema arabicum HOM05D004778 ORTHO05D005679 7.2e-06 54.3 54 53.7
Duzib106G1560 Durio zibethinus HOM05D004778 ORTHO05D005679 7.2e-06 54.3 53 52.8
BcaB01g04406 Brassica carinata HOM05D004778 ORTHO05D005679 9.5e-06 53.9 50 58.0
BcaC03g14215 Brassica carinata HOM05D004778 ORTHO05D005679 9.5e-06 53.9 54 55.6
C02p15150 Brassica napus HOM05D004778 ORTHO05D005679 9.5e-06 53.9 54 55.6
BolC2t07632H Brassica oleracea HOM05D004778 ORTHO05D005679 9.5e-06 53.9 54 55.6
CARHR088190 Cardamine hirsuta HOM05D004778 ORTHO05D005679 9.5e-06 53.9 55 56.4
Duzib128G0115 Durio zibethinus HOM05D004778 ORTHO05D005679 9.5e-06 53.9 53 52.8
Duzib177G0058 Durio zibethinus HOM05D004778 ORTHO05D005679 9.5e-06 53.9 53 50.9
Nitab4.5_0012156g0030 Nicotiana tabacum HOM05D004778 ORTHO05D005679 9.5e-06 53.9 54 57.4
Prupe.6G003500 Prunus persica HOM05D004778 ORTHO05D005679 9.5e-06 53.9 54 59.3
Thecc.05G250100 Theobroma cacao HOM05D004778 ORTHO05D005679 9.5e-06 53.9 49 59.2
TAR633G1575 Trochodendron aralioides HOM05D004778 ORTHO05D005679 9.5e-06 53.9 53 50.9


User provided reference genes

Program Settings