Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0144600 Salix brachista HOM05D005009 ORTHO05D006203 3.3e-172 608.2 297 100.0
Potri.003G193900 Populus trichocarpa HOM05D005009 ORTHO05D006203 2.8e-102 375.9 201 93.5
Manes.11G007500 Manihot esculenta HOM05D005009 ORTHO05D006203 5.4e-98 361.7 201 88.1
CiPaw.14G009400 Carya illinoinensis HOM05D005009 ORTHO05D006203 7.1e-98 361.3 201 89.1
Atru.chr12.1310 Acer truncatum HOM05D005009 ORTHO05D006203 1.2e-97 360.5 201 89.1
AUR62031741 Chenopodium quinoa HOM05D005009 ORTHO05D006203 4.6e-97 358.6 200 88.5
Gorai.003G105400 Gossypium raimondii HOM05D005009 ORTHO05D006203 6.0e-97 358.2 202 86.6
EL10Ac2g02762 Beta vulgaris HOM05D005009 ORTHO05D006203 7.8e-97 357.8 201 87.6
Haze_02993 Corylus avellana HOM05D005009 ORTHO05D006203 7.8e-97 357.8 201 88.6
Sed0026819 Sechium edule HOM05D005009 ORTHO05D006203 7.8e-97 357.8 229 80.8
COL.COLO4_32171 Corchorus olitorius HOM05D000011 ORTHO05D006203 1.0e-96 357.5 200 86.5
TWI15G1146 Tripterygium wilfordii HOM05D005009 ORTHO05D006203 1.7e-96 356.7 201 86.6
arahy.Tifrunner.gnm1.ann1.CDA2TW Arachis hypogaea HOM05D005009 ORTHO05D006203 2.3e-96 356.3 210 84.3
Gohir.A03G073900 Gossypium hirsutum HOM05D005009 ORTHO05D006203 2.3e-96 356.3 201 86.6
Gohir.D03G100300 Gossypium hirsutum HOM05D005009 ORTHO05D006203 2.3e-96 356.3 201 86.6
Thecc.03G114300 Theobroma cacao HOM05D005009 ORTHO05D006203 2.3e-96 356.3 201 86.1
AUR62032626 Chenopodium quinoa HOM05D005009 ORTHO05D006203 3.0e-96 355.9 200 87.5
Duzib084G0080 Durio zibethinus HOM05D005009 ORTHO05D006203 3.0e-96 355.9 201 86.6
CSS0011052 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 3.9e-96 355.5 201 87.6
Duzib068G0995 Durio zibethinus HOM05D005009 ORTHO05D006203 3.9e-96 355.5 201 87.1
FvH4_7g03830 Fragaria vesca HOM05D005009 ORTHO05D006203 3.9e-96 355.5 201 88.1
FAN03G3221 Fragaria x ananassa HOM05D005009 ORTHO05D006203 3.9e-96 355.5 201 88.1
FAN06G1190 Fragaria x ananassa HOM05D005009 ORTHO05D006203 3.9e-96 355.5 201 88.1
MBI19_g37444_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 3.9e-96 355.5 200 88.5
QL04p021447 Quercus lobata HOM05D005009 ORTHO05D006203 3.9e-96 355.5 201 86.6
QL07p029267 Quercus lobata HOM05D005009 ORTHO05D006203 3.9e-96 355.5 201 86.6
FAN10G3328 Fragaria x ananassa HOM05D005009 ORTHO05D006203 5.1e-96 355.1 202 87.6
Eucgr.E03953 Eucalyptus grandis HOM05D005009 ORTHO05D006203 6.6e-96 354.8 201 87.1
Phvul.011G192750 Phaseolus vulgaris HOM05D005009 ORTHO05D006203 6.6e-96 354.8 201 87.1
PGR031G2406 Punica granatum HOM05D005009 ORTHO05D006203 6.6e-96 354.8 201 86.6
Aqoxy2G00437 Aquilegia oxysepala HOM05D005009 ORTHO05D006203 8.7e-96 354.4 201 86.6
Ciclev10002585m.g Citrus clementina HOM05D005009 ORTHO05D006203 1.1e-95 354.0 201 86.6
RcHm_v2.0_Chr1g0327201 Rosa chinensis HOM05D005009 ORTHO05D006203 1.1e-95 354.0 201 87.6
Eucgr.G03210 Eucalyptus grandis HOM05D005009 ORTHO05D006203 1.5e-95 353.6 201 86.6
Lalb_Chr19g0132931 Lupinus albus HOM05D005009 ORTHO05D006203 1.5e-95 353.6 201 86.1
DCAR_006603 Daucus carota HOM05D005009 ORTHO05D006203 1.9e-95 353.2 201 86.1
Dinv32009 Davidia involucrata HOM05D005009 ORTHO05D006203 1.9e-95 353.2 201 87.1
Glyma.09G090300 Glycine max HOM05D005009 ORTHO05D006203 1.9e-95 353.2 201 86.1
Nitab4.5_0002838g0060 Nicotiana tabacum HOM05D005009 ORTHO05D006203 1.9e-95 353.2 200 87.0
Lj3g0027433 Lotus japonicus HOM05D005009 ORTHO05D006203 2.5e-95 352.8 201 86.1
PSO384G0249 Papaver somniferum HOM05D005009 ORTHO05D006203 3.3e-95 352.4 201 87.1
Psat4g146480 Pisum sativum HOM05D005009 ORTHO05D006203 3.3e-95 352.4 201 86.6
Solyc01g096610.4 Solanum lycopersicum HOM05D005009 ORTHO05D006203 3.3e-95 352.4 201 86.1
Sopen01g040340 Solanum pennellii HOM05D005009 ORTHO05D006203 3.3e-95 352.4 201 86.1
PGSC0003DMG401003286 Solanum tuberosum HOM05D005009 ORTHO05D006203 3.3e-95 352.4 201 86.1
Prupe.2G043300 Prunus persica HOM05D005009 ORTHO05D006203 4.3e-95 352.1 201 86.6
Dinv11234 Davidia involucrata HOM05D005009 ORTHO05D006203 5.6e-95 351.7 201 86.1
Medtr8g040630 Medicago truncatula HOM05D005009 ORTHO05D006203 5.6e-95 351.7 201 86.1
Actinidia06220 Actinidia chinensis HOM05D005009 ORTHO05D006203 7.3e-95 351.3 201 85.6
ECA248G2538 Erigeron canadensis HOM05D005009 ORTHO05D006203 7.3e-95 351.3 201 85.1
PSO339G0131 Papaver somniferum HOM05D005009 ORTHO05D006203 7.3e-95 351.3 201 86.6
Rhsim07G0069300 Rhododendron simsii HOM05D005009 ORTHO05D006203 7.3e-95 351.3 216 80.6
THA.LOC104826749 Tarenaya hassleriana HOM05D005009 ORTHO05D006203 7.3e-95 351.3 201 85.1
TPR.G8532 Trifolium pratense HOM05D005009 ORTHO05D006203 7.3e-95 351.3 201 86.1
ATR0307G112 Amborella trichopoda HOM05D005009 ORTHO05D006203 9.6e-95 350.9 201 86.1
Nn7g36825 Nelumbo nucifera HOM05D005009 ORTHO05D006203 9.6e-95 350.9 201 86.1
GSVIVG01036607001 Vitis vinifera HOM05D005009 ORTHO05D006203 9.6e-95 350.9 201 86.6
Zm00001eb317990 Zea mays HOM05D005009 ORTHO05D006203 9.6e-95 350.9 201 85.6
Cc03_g14060 Coffea canephora HOM05D005009 ORTHO05D006203 1.3e-94 350.5 201 86.6
Carub.0003s1167 Capsella rubella HOM05D005009 ORTHO05D006203 1.6e-94 350.1 201 85.1
ClCG05G027020 Citrullus lanatus HOM05D005009 ORTHO05D006203 1.6e-94 350.1 201 85.6
Thhalv10021577m.g Eutrema salsugineum HOM05D005009 ORTHO05D006203 1.6e-94 350.1 201 84.6
Ca_24007_v3 Cicer arietinum L. HOM05D005009 ORTHO05D006203 2.1e-94 349.7 200 86.5
Migut.B01192 Erythranthe guttata HOM05D005009 ORTHO05D006203 2.1e-94 349.7 201 85.6
TAR633G2352 Trochodendron aralioides HOM05D005009 ORTHO05D006203 2.1e-94 349.7 201 85.6
CANSAT01G2494 Cannabis sativa HOM05D005009 ORTHO05D006203 2.8e-94 349.4 201 86.1
CDE08G1579 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 3.6e-94 349.0 201 85.6
CsaV3_5G036940 Cucumis sativus L. HOM05D005009 ORTHO05D006203 3.6e-94 349.0 201 85.1
AL3G23960 Arabidopsis lyrata HOM05D005009 ORTHO05D006203 4.8e-94 348.6 201 84.1
Lsat_1_v5_gn_1_117041 Lactuca sativa HOM05D005009 ORTHO05D006203 4.8e-94 348.6 201 85.1
Sp3g10520 Schrenkiella parvula HOM05D005009 ORTHO05D006203 6.2e-94 348.2 201 84.1
Hma1.2p1_0837F.1_g226250 Hydrangea macrophylla HOM05D005009 ORTHO05D006203 8.1e-94 347.8 202 86.1
MBI19_g44926_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 8.1e-94 347.8 200 86.5
MSTRG.20500 Avicennia marina HOM05D005009 ORTHO05D006203 1.1e-93 347.4 201 85.6
Ah.01g018000 Amaranthus hybridus HOM05D005009 ORTHO05D006203 1.4e-93 347.1 195 87.7
AT3G12300 Arabidopsis thaliana HOM05D005009 ORTHO05D006203 1.8e-93 346.7 201 83.6
SEGI_18977 Sequoiadendron giganteum HOM05D005009 ORTHO05D006203 1.8e-93 346.7 200 84.5
HanXRQChr11g0341231 Helianthus annuus HOM05D005009 ORTHO05D006203 4.0e-93 345.5 201 84.1
SGA_v2.0_scaffold408G51079 Striga asiatica HOM05D005009 ORTHO05D006203 4.0e-93 345.5 201 85.1
Hund13390 Selenicereus undatus HOM05D005009 ORTHO05D006203 9.0e-93 344.4 200 85.0
BcaB04g18685 Brassica carinata HOM05D005009 ORTHO05D006203 1.2e-92 344.0 201 82.6
C01p53010 Brassica napus HOM05D005009 ORTHO05D006203 1.2e-92 344.0 200 83.0
BolC3t16835H Brassica oleracea HOM05D005009 ORTHO05D006203 1.2e-92 344.0 200 83.0
arahy.Tifrunner.gnm1.ann1.SBUN5C Arachis hypogaea HOM05D005009 ORTHO05D006203 2.0e-92 343.2 232 75.4
A03p37590 Brassica napus HOM05D005009 ORTHO05D006203 2.6e-92 342.8 200 82.5
BcaC01g04053 Brassica carinata HOM05D005009 ORTHO05D006203 3.4e-92 342.4 201 81.6
BcaC09g48230 Brassica carinata HOM05D005009 ORTHO05D006203 4.5e-92 342.0 201 82.1
C03p45580 Brassica napus HOM05D005009 ORTHO05D006203 4.5e-92 342.0 200 82.0
MELO3C034019.2 Cucumis melo HOM05D005009 ORTHO05D006203 4.5e-92 342.0 208 82.2
BolC1t05245H Brassica oleracea HOM05D005009 ORTHO05D006203 9.9e-92 340.9 200 82.5
unitig_22.g5330 Utricularia gibba HOM05D005009 ORTHO05D006203 2.2e-91 339.7 200 84.0
A06p13990 Brassica napus HOM05D005009 ORTHO05D006203 2.9e-91 339.3 200 82.5
GSVIVG01028667001 Vitis vinifera HOM05D005009 ORTHO05D006203 4.9e-91 338.6 200 84.5
Mapoly0109s0062 Marchantia polymorpha HOM05D005009 ORTHO05D006203 2.4e-90 336.3 201 79.1
Pp3c16_8300 Physcomitrium patens HOM05D005009 ORTHO05D006203 7.9e-89 331.3 201 77.6
AagrBONN_evm.TU.Sc2ySwM_340.215 Anthoceros agrestis HOM05D005009 ORTHO05D006203 3.9e-88 328.9 201 77.6
SMO137G0355 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 1.5e-87 327.0 201 76.6
Cre07.g351650 Chlamydomonas reinhardtii HOM05D005009 ORTHO05D006203 3.3e-87 325.9 201 75.6
vmacro21942 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 4.3e-87 325.5 183 86.3
vmacro23458 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 4.3e-87 325.5 183 86.3
PRCOL_00001494 Prasinoderma coloniale HOM05D005009 ORTHO05D006203 9.6e-87 324.3 201 75.6
Peaxi162Scf00220g00315 Petunia axillaris HOM05D005009 ORTHO05D006203 2.0e-84 316.6 183 84.7
MCO01G737 Micromonas commoda HOM05D005009 ORTHO05D006203 7.6e-84 314.7 201 72.6
Aa31LG3G6530 Aethionema arabicum HOM05D005009 ORTHO05D006203 1.3e-83 313.9 201 76.6
Os09g0510200 Oryza sativa ssp. japonica HOM05D005009 ORTHO05D006203 4.2e-82 308.9 183 81.4
Pp3c7_7130 Physcomitrium patens HOM05D005009 ORTHO05D006203 4.2e-82 308.9 200 72.0
SMO137G0211 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 4.2e-82 308.9 200 72.5
CSS0003702 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 3.3e-79 299.3 176 84.1
Cpa.g.sc82.9 Carica papaya HOM05D005009 ORTHO05D006203 9.6e-79 297.7 174 83.9
VMungo1127G1850 Vigna mungo HOM05D005009 ORTHO05D006203 1.3e-78 297.4 179 82.7
SHI34551 Sapria himalayana HOM05D005009 ORTHO05D006203 2.4e-77 293.1 172 84.3
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 1.2e-73 280.8 209 69.9
Glyma.13G184700 Glycine max HOM05D005009 ORTHO05D006203 1.3e-72 277.3 173 80.3
Lj9A658G62 Lonicera japonica HOM05D005009 ORTHO05D006203 8.7e-72 274.6 183 76.0
Haze_26638 Corylus avellana HOM05D005009 ORTHO05D006203 1.6e-65 253.8 200 64.0
Pp3c25_460 Physcomitrium patens HOM05D005009 ORTHO05D006203 1.8e-61 240.4 200 60.0
Sed0013386 Sechium edule HOM05D005009 ORTHO05D006203 1.5e-60 237.3 152 78.9
SMO232G0039 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 6.7e-56 221.9 195 56.9
SMO352G0037 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 2.8e-54 216.5 218 50.0
HPP92_011758 Vanilla planifolia HOM05D005009 ORTHO05D006203 9.1e-53 211.5 161 68.3
CDE08G0779 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 3.5e-52 209.5 124 82.3
Glyma.13G188400 Glycine max HOM05D005009 ORTHO05D006203 1.3e-51 207.6 140 77.1
Nitab4.5_0004168g0130 Nicotiana tabacum HOM05D005009 ORTHO05D006203 1.7e-51 207.2 110 91.8
MD02G1276800 Malus domestica HOM05D005009 ORTHO05D006203 2.9e-51 206.5 126 81.7
HPP92_011756 Vanilla planifolia HOM05D005009 ORTHO05D006203 8.5e-51 204.9 115 88.7
Oeu064146.2 Olea europaea HOM05D005009 ORTHO05D006203 5.5e-50 202.2 126 80.2
ClCG05G014250 Citrullus lanatus HOM05D005009 ORTHO05D006203 1.6e-49 200.7 170 60.0
BraA03t12913Z Brassica rapa HOM05D005009 ORTHO05D006203 3.0e-48 196.4 118 79.7
Cfa001149 Carpinus fangiana HOM05D005009 ORTHO05D006203 1.7e-38 164.1 81 92.6
MD02G1276900 Malus domestica HOM05D005009 ORTHO05D006203 1.4e-37 161.0 79 92.4
Glyma.13G192001 Glycine max HOM05D005009 ORTHO05D006203 1.8e-37 160.6 87 83.9
Actinidia07967 Actinidia chinensis HOM05D005009 ORTHO05D006203 4.1e-37 159.5 87 83.9
HPP92_011747 Vanilla planifolia HOM05D005009 ORTHO05D006203 2.0e-36 157.1 82 86.6
Glyma.13G188051 Glycine max HOM05D005009 ORTHO05D006203 1.7e-35 154.1 85 88.2
Sc11g0006340 Simmondsia chinensis HOM05D005009 ORTHO05D006203 1.1e-34 151.4 87 87.4
Pp3c6_12450 Physcomitrium patens HOM05D005009 ORTHO05D006203 1.0e-32 144.8 168 43.5
Glyma.13G190100 Glycine max HOM05D005009 ORTHO05D006203 6.8e-32 142.1 72 88.9
CARHR086850 Cardamine hirsuta HOM05D005009 ORTHO05D006203 1.3e-30 137.9 69 89.9
MD07G1044300 Malus domestica HOM05D005009 ORTHO05D006203 4.8e-30 136.0 69 89.9
BolC1t05246H Brassica oleracea HOM05D005009 ORTHO05D006203 6.6e-27 125.6 68 85.3
Prupe.3G123900 Prunus persica HOM05D005009 ORTHO05D006203 6.6e-27 125.6 84 79.8
BcaC09g48229 Brassica carinata HOM05D005009 ORTHO05D006203 3.3e-26 123.2 68 83.8
C01p53030 Brassica napus HOM05D005009 ORTHO05D006203 3.3e-26 123.2 68 83.8
Manes.04G156350 Manihot esculenta HOM05D005009 ORTHO05D006203 1.1e-18 98.2 53 81.1
arahy.Tifrunner.gnm1.ann1.WDN55T Arachis hypogaea HOM05D000001 ORTHO05D009381 2.3e-16 90.5 47 83.0
A03p22660 Brassica napus HOM05D005009 ORTHO05D033042 2.0e-12 77.4 41 85.4
A10p02030 Brassica napus HOM05D005009 ORTHO05D006203 2.0e-12 77.4 41 85.4
C03p63540 Brassica napus HOM05D005009 ORTHO05D033042 2.0e-12 77.4 41 85.4
BraA02t08111Z Brassica rapa HOM05D005009 ORTHO05D033042 2.0e-12 77.4 41 85.4
A01p39420 Brassica napus HOM05D005009 ORTHO05D006203 6.0e-12 75.9 37 91.9


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