Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0142600 Salix brachista HOM05D001595 ORTHO05D001573 2.8e-67 258.5 127 100.0
Sabra03G0021300 Salix brachista HOM05D001595 ORTHO05D001573 1.1e-31 140.2 121 66.1
Sabra18G0027400 Salix brachista HOM05D001595 ORTHO05D001573 1.1e-31 140.2 120 66.7
Sabra03G0141600 Salix brachista HOM05D001595 ORTHO05D001573 2.0e-25 119.4 60 91.7
Sabra03G0141800 Salix brachista HOM05D001595 ORTHO05D001573 2.0e-25 119.4 60 91.7
Sabra03G0142000 Salix brachista HOM05D001595 ORTHO05D001573 2.0e-25 119.4 60 91.7
Sabra03G0142400 Salix brachista HOM05D001595 ORTHO05D001573 2.0e-25 119.4 60 91.7
Sabra03G0141400 Salix brachista HOM05D001595 ORTHO05D001573 7.6e-25 117.5 60 90.0
Sabra03G0142200 Salix brachista HOM05D001595 ORTHO05D001573 7.6e-25 117.5 60 90.0
Potri.003G191800 Populus trichocarpa HOM05D001595 ORTHO05D001573 1.3e-24 116.7 110 60.0
Potri.001G353600 Populus trichocarpa HOM05D001595 ORTHO05D001573 2.5e-23 112.5 123 52.8
Sabra09G0058800 Salix brachista HOM05D001595 ORTHO05D001573 6.9e-18 94.4 131 48.1
Potri.009G077000 Populus trichocarpa HOM05D001595 ORTHO05D001573 2.6e-17 92.4 128 50.0
Thecc.08G155000 Theobroma cacao HOM05D001595 ORTHO05D001573 2.8e-11 72.4 61 54.1
CiPaw.16G010800 Carya illinoinensis HOM05D001595 ORTHO05D001573 9.1e-10 67.4 63 47.6
Atru.chr13.2076 Acer truncatum HOM05D001595 ORTHO05D001573 3.4e-09 65.5 118 40.7
Manes.17G065250 Manihot esculenta HOM05D001595 ORTHO05D001573 3.4e-09 65.5 120 40.0
TPR.G13564 Trifolium pratense HOM05D001595 ORTHO05D001573 5.9e-09 64.7 54 53.7
FAN27G3279 Fragaria x ananassa HOM05D001595 ORTHO05D001573 7.7e-09 64.3 109 41.3
Duzib116G0136 Durio zibethinus HOM05D001595 ORTHO05D001573 1.0e-08 63.9 61 49.2
FvH4_2g18870 Fragaria vesca HOM05D001595 ORTHO05D001573 1.0e-08 63.9 101 41.6
FAN24G2361 Fragaria x ananassa HOM05D001595 ORTHO05D001573 1.0e-08 63.9 101 41.6
FvH4_2g18700 Fragaria vesca HOM05D001595 ORTHO05D001573 1.3e-08 63.5 101 41.6
FAN27G1121 Fragaria x ananassa HOM05D001595 ORTHO05D001573 1.3e-08 63.5 101 41.6
Medtr8g099500 Medicago truncatula HOM05D001595 ORTHO05D001573 1.3e-08 63.5 47 53.2
Gohir.D05G272700 Gossypium hirsutum HOM05D001595 ORTHO05D001573 2.2e-08 62.8 49 55.1
Gorai.009G285800 Gossypium raimondii HOM05D001595 ORTHO05D001573 2.2e-08 62.8 49 55.1
MD10G1029400 Malus domestica HOM05D001595 ORTHO05D001573 2.2e-08 62.8 130 36.9
PGR044G0324 Punica granatum HOM05D001595 ORTHO05D001573 2.2e-08 62.8 112 36.6
FAN15G0477 Fragaria x ananassa HOM05D001595 ORTHO05D001573 2.9e-08 62.4 102 40.2
Glyma.09G195200 Glycine max HOM05D001595 ORTHO05D001573 2.9e-08 62.4 48 54.2
TPR.G858 Trifolium pratense HOM05D001595 ORTHO05D001573 2.9e-08 62.4 61 50.8
VMungo0540G1199 Vigna mungo HOM05D001595 ORTHO05D001573 2.9e-08 62.4 42 54.8
Gohir.A05G270700 Gossypium hirsutum HOM05D001595 ORTHO05D001573 5.0e-08 61.6 49 55.1
Atru.chr8.1692 Acer truncatum HOM05D001595 ORTHO05D001573 6.5e-08 61.2 60 50.0
Prupe.I003300 Prunus persica HOM05D001595 ORTHO05D001573 6.5e-08 61.2 54 50.0
Gohir.A05G144200 Gossypium hirsutum HOM05D001595 ORTHO05D001573 8.5e-08 60.8 101 38.6
Lalb_Chr08g0239061 Lupinus albus HOM05D001595 ORTHO05D001573 8.5e-08 60.8 119 33.6
Atru.chr13.2075 Acer truncatum HOM05D001595 ORTHO05D001573 1.1e-07 60.5 53 50.9
Phvul.006G037100 Phaseolus vulgaris HOM05D001595 ORTHO05D001573 1.4e-07 60.1 40 55.0
Gorai.009G150400 Gossypium raimondii HOM05D001595 ORTHO05D001573 1.9e-07 59.7 101 38.6
Prupe.8G031900 Prunus persica HOM05D001595 ORTHO05D001573 1.9e-07 59.7 60 48.3
Prupe.8G032300 Prunus persica HOM05D001595 ORTHO05D001573 1.9e-07 59.7 60 48.3
TPR.G8467 Trifolium pratense HOM05D001595 ORTHO05D001573 1.9e-07 59.7 42 54.8
FAN15G0384 Fragaria x ananassa HOM05D001595 ORTHO05D001573 2.5e-07 59.3 102 38.2
Glyma.20G168300 Glycine max HOM05D001595 ORTHO05D001573 2.5e-07 59.3 50 50.0
Medtr3g049320 Medicago truncatula HOM05D001595 ORTHO05D001573 2.5e-07 59.3 94 36.2
PSO063G4001 Papaver somniferum HOM05D001595 ORTHO05D001573 2.5e-07 59.3 53 50.9
Psat0s3756g0040 Pisum sativum HOM05D001595 ORTHO05D001573 2.5e-07 59.3 51 49.0
Sabra16G0192900 Salix brachista HOM05D001595 ORTHO05D001573 3.2e-07 58.9 42 52.4
CAN.G516.7 Capsicum annuum HOM05D001595 ORTHO05D001573 4.2e-07 58.5 50 48.0
Manes.12G150100 Manihot esculenta HOM05D001595 ORTHO05D001573 4.2e-07 58.5 57 47.4
PSO017G1258 Papaver somniferum HOM05D001595 ORTHO05D001573 4.2e-07 58.5 50 48.0
PSO063G2756 Papaver somniferum HOM05D001595 ORTHO05D001573 4.2e-07 58.5 50 50.0
RcHm_v2.0_Chr6g0284691 Rosa chinensis HOM05D001595 ORTHO05D001573 4.2e-07 58.5 110 35.5
AUR62019334 Chenopodium quinoa HOM05D001595 ORTHO05D001573 5.5e-07 58.2 36 61.1
COL.COLO4_29870 Corchorus olitorius HOM05D001595 ORTHO05D001573 5.5e-07 58.2 41 53.7
Glyma.06G199900 Glycine max HOM05D001595 ORTHO05D001573 5.5e-07 58.2 54 42.6
Lj6g0002778 Lotus japonicus HOM05D001595 ORTHO05D001573 5.5e-07 58.2 60 46.7
Nitab4.5_0001582g0120 Nicotiana tabacum HOM05D001595 ORTHO05D001573 5.5e-07 58.2 40 52.5
Prupe.8G034800 Prunus persica HOM05D001595 ORTHO05D001573 5.5e-07 58.2 46 54.3
Rhsim08G0004100 Rhododendron simsii HOM05D001595 ORTHO05D001573 5.5e-07 58.2 45 57.8
SalBow7G4086 Salvia bowleyana HOM05D001595 ORTHO05D001573 5.5e-07 58.2 46 54.3
Ca_14639_v3 Cicer arietinum L. HOM05D001595 ORTHO05D001573 7.2e-07 57.8 45 48.9
FAN23G0515 Fragaria x ananassa HOM05D001595 ORTHO05D001573 7.2e-07 57.8 50 50.0
FAN26G2637 Fragaria x ananassa HOM05D001595 ORTHO05D001573 7.2e-07 57.8 50 50.0
Medtr3g049180 Medicago truncatula HOM05D001595 ORTHO05D001573 7.2e-07 57.8 42 50.0
Nitab4.5_0002138g0040 Nicotiana tabacum HOM05D001595 ORTHO05D001573 7.2e-07 57.8 53 47.2
Potri.001G306700 Populus trichocarpa HOM05D001595 ORTHO05D001573 7.2e-07 57.8 42 50.0
Ciclev10003810m.g Citrus clementina HOM05D001595 ORTHO05D001573 9.4e-07 57.4 108 35.2
PGR042G0959 Punica granatum HOM05D001595 ORTHO05D001573 9.4e-07 57.4 36 61.1
RcHm_v2.0_Chr2g0119721 Rosa chinensis HOM05D001595 ORTHO05D001573 9.4e-07 57.4 44 52.3
TPR.G3442 Trifolium pratense HOM05D001595 ORTHO05D001573 9.4e-07 57.4 40 52.5
AUR62006156 Chenopodium quinoa HOM05D001595 ORTHO05D001573 1.2e-06 57.0 36 58.3
DCAR_027561 Daucus carota HOM05D000076 ORTHO05D001377 1.2e-06 57.0 42 52.4
Phvul.003G272700 Phaseolus vulgaris HOM05D001595 ORTHO05D001573 1.2e-06 57.0 54 40.7
EL10Ac3g05349 Beta vulgaris HOM05D001595 ORTHO05D001573 1.6e-06 56.6 39 56.4
FvH4_2g13390 Fragaria vesca HOM05D001595 ORTHO05D001573 1.6e-06 56.6 97 37.1
FvH4_5g02500 Fragaria vesca HOM05D001595 ORTHO05D001573 1.6e-06 56.6 96 31.2
FAN13G2138 Fragaria x ananassa HOM05D001595 ORTHO05D001573 1.6e-06 56.6 42 50.0
Gohir.D05G146600 Gossypium hirsutum HOM05D001595 ORTHO05D001573 1.6e-06 56.6 101 37.6
Lj6g0008981 Lotus japonicus HOM05D001595 ORTHO05D001573 1.6e-06 56.6 42 47.6
Prupe.8G053400 Prunus persica HOM05D001595 ORTHO05D001573 1.6e-06 56.6 79 40.5
RcHm_v2.0_Chr2g0119751 Rosa chinensis HOM05D001595 ORTHO05D001573 1.6e-06 56.6 44 50.0
RcHm_v2.0_Chr6g0274951 Rosa chinensis HOM05D001595 ORTHO05D001573 1.6e-06 56.6 46 50.0
AUR62040231 Chenopodium quinoa HOM05D001595 ORTHO05D001573 2.1e-06 56.2 49 44.9
FAN04G2420 Fragaria x ananassa HOM05D001595 ORTHO05D001573 2.1e-06 56.2 96 31.2
FAN07G0269 Fragaria x ananassa HOM05D001595 ORTHO05D001573 2.1e-06 56.2 50 48.0
FAN20G0442 Fragaria x ananassa HOM05D001595 ORTHO05D001573 2.1e-06 56.2 97 37.1
FAN24G0780 Fragaria x ananassa HOM05D001595 ORTHO05D001573 2.1e-06 56.2 97 37.1
Lj4P858T30 Lonicera japonica HOM05D001595 ORTHO05D001573 2.1e-06 56.2 98 34.7
Nitab4.5_0002138g0050 Nicotiana tabacum HOM05D001595 ORTHO05D001573 2.1e-06 56.2 45 46.7
RcHm_v2.0_Chr7g0197601 Rosa chinensis HOM05D001595 ORTHO05D001573 2.1e-06 56.2 100 34.0
SGA_v2.0_scaffold34G13650 Striga asiatica HOM05D001595 ORTHO05D001573 2.1e-06 56.2 46 47.8
A07p28370 Brassica napus HOM05D001595 ORTHO05D001573 2.7e-06 55.8 49 53.1
MELO3C004901.2 Cucumis melo HOM05D001595 ORTHO05D001573 2.7e-06 55.8 61 44.3
FAN15G2959 Fragaria x ananassa HOM05D001595 ORTHO05D001573 2.7e-06 55.8 97 37.1
Hma1.2p1_0038F.1_g024240 Hydrangea macrophylla HOM05D001595 ORTHO05D001573 2.7e-06 55.8 48 47.9
PSO017G4778 Papaver somniferum HOM05D001595 ORTHO05D001573 3.6e-06 55.5 52 48.1
SHI02936 Sapria himalayana HOM05D001595 ORTHO05D001573 3.6e-06 55.5 120 34.2
VMungo0251G0665 Vigna mungo HOM05D001595 ORTHO05D001573 3.6e-06 55.5 44 45.5
Actinidia28428 Actinidia chinensis HOM05D001595 ORTHO05D001573 4.7e-06 55.1 61 45.9
Lj3g0006531 Lotus japonicus HOM05D001595 ORTHO05D001573 4.7e-06 55.1 46 50.0
PGSC0003DMG400003995 Solanum tuberosum HOM05D001595 ORTHO05D001573 4.7e-06 55.1 49 46.9
TAR628G1528 Trochodendron aralioides HOM05D001595 ORTHO05D001573 4.7e-06 55.1 109 33.0
unitig_7.g29872 Utricularia gibba HOM05D001595 ORTHO05D001573 4.7e-06 55.1 97 32.0
unitig_748.g8664 Utricularia gibba HOM05D001595 ORTHO05D001573 4.7e-06 55.1 97 32.0
Cc07_g16880 Coffea canephora HOM05D001595 ORTHO05D001573 6.1e-06 54.7 51 45.1
DCAR_001408 Daucus carota HOM05D001595 ORTHO05D001573 6.1e-06 54.7 57 42.1
ECA248G2798 Erigeron canadensis HOM05D001595 ORTHO05D001573 6.1e-06 54.7 45 46.7
FvH4_1g23830 Fragaria vesca HOM05D001595 ORTHO05D001573 6.1e-06 54.7 50 50.0
FAN18G2357 Fragaria x ananassa HOM05D002706 ORTHO05D003253 6.1e-06 54.7 96 30.2
PSO017G3093 Papaver somniferum HOM05D001595 ORTHO05D001573 6.1e-06 54.7 51 51.0
QL11p027894 Quercus lobata HOM05D001595 ORTHO05D001573 6.1e-06 54.7 48 50.0
THA.LOC104812034 Tarenaya hassleriana HOM05D001595 ORTHO05D001573 6.1e-06 54.7 54 44.4
BcaB02g07121 Brassica carinata HOM05D001595 ORTHO05D001573 7.9e-06 54.3 49 51.0
BcaC08g45511 Brassica carinata HOM05D001595 ORTHO05D001573 7.9e-06 54.3 36 58.3
C06p31810 Brassica napus HOM05D001595 ORTHO05D001573 7.9e-06 54.3 36 58.3
BolC6t38309H Brassica oleracea HOM05D001595 ORTHO05D001573 7.9e-06 54.3 36 58.3
DCAR_001403 Daucus carota HOM05D001595 ORTHO05D001573 7.9e-06 54.3 42 47.6
Migut.C00168 Erythranthe guttata HOM05D001595 ORTHO05D001573 7.9e-06 54.3 34 61.8
FAN08G1743 Fragaria x ananassa HOM05D001595 ORTHO05D001573 7.9e-06 54.3 96 30.2
Glyma.18G103100 Glycine max HOM05D001595 ORTHO05D001573 7.9e-06 54.3 40 52.5
SalBow7G2484 Salvia bowleyana HOM05D001595 ORTHO05D001573 7.9e-06 54.3 40 50.0
Solyc11g005540.1 Solanum lycopersicum HOM05D001595 ORTHO05D001573 7.9e-06 54.3 50 42.0


User provided reference genes

Program Settings