Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0137900 Salix brachista HOM05D009639 ORTHO05D010690 0.0e+00 1836.2 926 100.0
Potri.003G188600 Populus trichocarpa HOM05D009639 ORTHO05D010690 0.0e+00 1507.3 931 84.7
Manes.11G010500 Manihot esculenta HOM05D009639 ORTHO05D010690 4.5e-82 310.5 936 30.4
QL04p023061 Quercus lobata HOM05D009639 ORTHO05D010690 3.1e-59 234.6 1011 27.1
Haze_02948 Corylus avellana HOM05D009639 ORTHO05D010690 5.9e-58 230.3 1086 26.7
Cfa010987 Carpinus fangiana HOM05D009639 ORTHO05D010690 3.5e-42 177.9 988 26.2
Atru.chr12.1203 Acer truncatum HOM05D009639 ORTHO05D006184 4.7e-39 167.5 955 24.4
Nn7g37150 Nelumbo nucifera HOM05D009639 ORTHO05D010690 6.8e-30 137.1 991 22.1
Ciclev10002267m.g Citrus clementina HOM05D009639 ORTHO05D010690 8.6e-25 120.2 159 45.3
Phvul.005G012500 Phaseolus vulgaris HOM05D009639 ORTHO05D010690 1.1e-24 119.8 169 49.1
TAR623G0143 Trochodendron aralioides HOM05D009639 ORTHO05D010690 1.5e-24 119.4 127 55.1
CANSAT56G3803 Cannabis sativa HOM05D009639 ORTHO05D010690 6.2e-23 114.0 959 22.9
Lalb_Chr18g0048201 Lupinus albus HOM05D009639 ORTHO05D010690 4.0e-22 111.3 198 42.4
Glyma.04G124900 Glycine max HOM05D009639 ORTHO05D010690 5.2e-22 110.9 208 38.9
VMungo1080G0201 Vigna mungo HOM05D009639 ORTHO05D010690 2.0e-21 109.0 205 41.0
Lj3g0012055 Lotus japonicus HOM05D009639 ORTHO05D010690 3.4e-21 108.2 146 50.7
Glyma.06G313400 Glycine max HOM05D009639 ORTHO05D010690 3.2e-19 101.7 209 37.8
CiPaw.13G018700 Carya illinoinensis HOM05D009639 ORTHO05D010690 4.1e-19 101.3 133 46.6
Medtr3g010860 Medicago truncatula HOM05D009639 ORTHO05D010690 4.1e-19 101.3 144 48.6
TPR.G24389 Trifolium pratense HOM05D009639 ORTHO05D010690 1.6e-18 99.4 195 41.0
Aqoxy1G01630 Aquilegia oxysepala HOM05D028564 ORTHO05D010690 2.0e-18 99.0 184 38.0
Psat4g150240 Pisum sativum HOM05D009639 ORTHO05D010690 2.0e-18 99.0 177 42.9
Aqoxy5G04141 Aquilegia oxysepala HOM05D009639 ORTHO05D010690 1.7e-17 95.9 124 46.0
Ca_25852_v3 Cicer arietinum L. HOM05D009639 ORTHO05D010690 3.9e-17 94.7 89 57.3
Psat5g223640 Pisum sativum HOM05D009639 ORTHO05D010690 8.6e-17 93.6 189 41.3
Aa31LG10G5240 Aethionema arabicum HOM05D010442 ORTHO05D010690 8.3e-12 77.0 188 32.4
Atru.chr12.1201 Acer truncatum HOM05D009639 ORTHO05D010690 1.1e-11 76.6 173 33.5
ATR1096G036 Amborella trichopoda HOM05D009639 ORTHO05D010690 2.7e-10 72.0 146 39.0
SEGI_28746 Sequoiadendron giganteum HOM05D003060 ORTHO05D001716 2.7e-10 72.0 267 28.5
Sp1g35500 Schrenkiella parvula HOM05D010442 ORTHO05D010690 8.6e-09 67.0 186 30.6
BcaC08g43056 Brassica carinata HOM05D010442 ORTHO05D010690 1.5e-08 66.2 192 33.3
C06p03150 Brassica napus HOM05D010442 ORTHO05D010690 1.5e-08 66.2 192 33.3
BolC6t35433H Brassica oleracea HOM05D010442 ORTHO05D010690 1.5e-08 66.2 192 33.3
AL1G55200 Arabidopsis lyrata HOM05D010442 ORTHO05D010690 4.3e-08 64.7 184 31.0
Carub.0001s3767 Capsella rubella HOM05D010442 ORTHO05D010690 1.2e-07 63.2 223 29.6
BraA06t23642Z Brassica rapa HOM05D010442 ORTHO05D010690 1.6e-07 62.8 183 32.2
AT1G48560 Arabidopsis thaliana HOM05D010442 ORTHO05D010690 2.1e-07 62.4 183 31.1
A06p04380 Brassica napus HOM05D010442 ORTHO05D010690 2.1e-07 62.4 180 31.7
BcaB07g33758 Brassica carinata HOM05D010442 ORTHO05D010690 4.7e-07 61.2 162 27.2
Hund02451 Selenicereus undatus HOM05D000855 ORTHO05D001716 1.4e-06 59.7 159 33.3
BcaB07g33745 Brassica carinata HOM05D010442 ORTHO05D010690 1.8e-06 59.3 183 32.2
Duzib177G0733 Durio zibethinus HOM05D003060 ORTHO05D001716 2.3e-06 58.9 114 36.0
TWI36G0905 Tripterygium wilfordii HOM05D003060 ORTHO05D001716 2.3e-06 58.9 78 43.6
TAR371G0869 Trochodendron aralioides HOM05D000855 ORTHO05D001716 2.3e-06 58.9 78 47.4
A06p04460 Brassica napus HOM05D010442 ORTHO05D010690 5.2e-06 57.8 98 30.6
Thhalv10011299m.g Eutrema salsugineum HOM05D010442 ORTHO05D010690 5.2e-06 57.8 247 30.0
CDE02G1047 Ceratophyllum demersum HOM05D003060 ORTHO05D001716 6.8e-06 57.4 115 34.8
Duzib211G0658 Durio zibethinus HOM05D003060 ORTHO05D001716 6.8e-06 57.4 117 35.0
Eucgr.H04503 Eucalyptus grandis HOM05D003060 ORTHO05D001716 6.8e-06 57.4 185 33.5
Manes.09G169200 Manihot esculenta HOM05D003060 ORTHO05D001716 6.8e-06 57.4 66 47.0
Sed0012843 Sechium edule HOM05D003060 ORTHO05D001716 6.8e-06 57.4 78 41.0


User provided reference genes

Program Settings