Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0129800 Salix brachista HOM05D009286 ORTHO05D011130 3.9e-100 368.2 201 100.0
Potri.003G177200 Populus trichocarpa HOM05D009286 ORTHO05D011130 1.6e-45 186.8 102 90.2
Potri.001G051300 Populus trichocarpa HOM05D009286 ORTHO05D011130 3.2e-33 146.0 101 76.2
Manes.15G051025 Manihot esculenta HOM05D009286 ORTHO05D011130 3.9e-23 112.5 138 52.9
Manes.03G149800 Manihot esculenta HOM05D009286 ORTHO05D011130 3.6e-21 105.9 99 63.6
Duzib151G0679 Durio zibethinus HOM05D009286 ORTHO05D011130 5.3e-20 102.1 99 62.6
QL06p023574 Quercus lobata HOM05D009286 ORTHO05D011130 1.2e-19 100.9 102 58.8
Thecc.04G210000 Theobroma cacao HOM05D009286 ORTHO05D011130 1.2e-19 100.9 102 62.7
Cfa014890 Carpinus fangiana HOM05D009286 ORTHO05D011130 4.4e-19 99.0 95 60.0
Gohir.D02G031400 Gossypium hirsutum HOM05D009286 ORTHO05D011130 5.8e-19 98.6 96 65.6
Gorai.005G034900 Gossypium raimondii HOM05D009286 ORTHO05D011130 5.8e-19 98.6 96 65.6
Gohir.A02G024000 Gossypium hirsutum HOM05D009286 ORTHO05D011130 9.9e-19 97.8 96 64.6
Haze_11576 Corylus avellana HOM05D009286 ORTHO05D011130 1.3e-18 97.4 95 60.0
CiPaw.01G125200 Carya illinoinensis HOM05D009286 ORTHO05D011130 1.9e-17 93.6 138 45.7
CiPaw.02G067700 Carya illinoinensis HOM05D009286 ORTHO05D011130 9.3e-17 91.3 88 59.1
Duzib268G0949 Durio zibethinus HOM05D009286 ORTHO05D011130 2.1e-16 90.1 100 58.0
COL.COLO4_20307 Corchorus olitorius HOM05D009286 ORTHO05D011130 2.7e-16 89.7 93 60.2
Duzib268G0451 Durio zibethinus HOM05D009286 ORTHO05D011130 2.7e-16 89.7 100 58.0
Gohir.D09G196800 Gossypium hirsutum HOM05D009286 ORTHO05D011130 2.3e-15 86.7 88 59.1
Gorai.006G220200 Gossypium raimondii HOM05D009286 ORTHO05D011130 2.3e-15 86.7 88 59.1
Gohir.A09G202700 Gossypium hirsutum HOM05D009286 ORTHO05D011130 5.1e-15 85.5 84 58.3
Atru.chr4.1762 Acer truncatum HOM05D009286 ORTHO05D011130 1.1e-14 84.3 72 66.7
Actinidia39956 Actinidia chinensis HOM05D000290 ORTHO05D006586 4.8e-13 79.0 89 55.1
Sed0020601 Sechium edule HOM05D009286 ORTHO05D011130 2.4e-12 76.6 84 52.4
MBI07_g22395_MAGBIO Magnolia biondii HOM05D009286 ORTHO05D011130 9.9e-11 71.2 97 48.5
Ciclev10006054m.g Citrus clementina HOM05D009286 ORTHO05D011130 4.9e-10 68.9 76 53.9
Cpa.g.sc59.104 Carica papaya HOM05D009286 ORTHO05D011130 2.1e-08 63.5 86 50.0
ATR0787G204 Amborella trichopoda HOM05D009286 ORTHO05D011130 2.7e-08 63.2 68 50.0
TAR633G2369 Trochodendron aralioides HOM05D009286 ORTHO05D011130 6.0e-08 62.0 68 51.5
Oeu063490.1 Olea europaea HOM05D009286 ORTHO05D011130 1.8e-07 60.5 68 51.5
Migut.G00633 Erythranthe guttata HOM05D009286 ORTHO05D011130 6.7e-07 58.5 71 52.1
CSS0021418 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D006586 7.4e-06 55.1 61 52.5


User provided reference genes

Program Settings