Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 5.4e-148 527.7 281 100.0
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 7.1e-140 500.7 281 94.0
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 2.8e-120 435.6 270 83.7
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 1.2e-115 420.2 282 80.5
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 2.1e-115 419.5 281 78.3
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 2.3e-114 416.0 274 78.8
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.6e-112 409.8 280 76.4
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 1.8e-111 406.4 279 76.3
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 1.5e-110 403.3 266 77.8
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 5.9e-110 401.4 278 75.5
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 1.3e-109 400.2 272 76.1
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 1.7e-109 399.8 272 75.7
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 2.2e-109 399.4 273 75.5
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 2.9e-109 399.1 273 75.8
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 2.9e-109 399.1 276 74.3
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 6.5e-109 397.9 273 75.1
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 1.1e-108 397.1 273 75.8
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.5e-108 396.0 270 76.3
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 3.2e-108 395.6 271 74.9
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.2e-108 395.6 273 74.4
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 9.3e-108 394.0 277 74.4
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.2e-107 393.7 275 75.6
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.2e-107 393.7 274 74.8
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.7e-107 392.5 273 74.7
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 4.6e-107 391.7 266 74.8
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.3e-106 390.2 277 73.6
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 3.0e-106 389.0 273 72.9
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 1.1e-105 387.1 271 72.7
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 4.3e-105 385.2 270 74.1
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 1.3e-104 383.6 266 73.3
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.3e-104 383.6 275 69.8
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 1.3e-104 383.6 267 73.4
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 8.2e-104 380.9 271 73.1
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 8.2e-104 380.9 270 73.7
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 1.8e-103 379.8 276 69.9
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 2.4e-103 379.4 272 71.7
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 4.1e-103 378.6 274 72.6
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.2e-102 377.1 270 70.4
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 1.2e-102 377.1 273 72.2
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.2e-102 377.1 274 72.3
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 1.5e-102 376.7 275 68.4
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.5e-102 376.7 270 73.0
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 4.5e-102 375.2 269 72.9
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 7.7e-102 374.4 275 68.0
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 1.0e-101 374.0 273 67.8
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.3e-101 373.6 274 71.5
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.7e-101 373.2 271 70.8
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 5.0e-101 371.7 285 68.4
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 6.5e-101 371.3 285 68.8
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 8.5e-101 370.9 267 73.0
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 8.5e-101 370.9 282 67.0
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 1.1e-100 370.5 274 70.1
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 1.4e-100 370.2 285 68.8
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 1.9e-100 369.8 281 68.7
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 1.9e-100 369.8 270 68.9
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 2.5e-100 369.4 275 67.3
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 3.2e-100 369.0 273 68.1
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 5.5e-100 368.2 271 69.0
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 1.2e-99 367.1 276 68.8
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 4.6e-99 365.2 322 62.7
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 1.0e-98 364.0 271 67.9
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.0e-98 364.0 277 69.0
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 1.4e-98 363.6 271 68.3
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 3.0e-98 362.5 271 67.5
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 3.0e-98 362.5 271 67.5
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 3.0e-98 362.5 273 68.9
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 8.8e-98 360.9 267 71.2
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.1e-97 360.5 273 67.8
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 1.1e-97 360.5 280 69.3
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.5e-97 360.1 278 68.0
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 3.3e-97 359.0 243 77.4
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 9.7e-97 357.5 282 68.8
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 2.2e-96 356.3 262 68.7
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 4.8e-96 355.1 276 67.8
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 6.3e-96 354.8 268 70.5
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 1.4e-95 353.6 280 66.4
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 1.8e-95 353.2 267 70.0
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 2.4e-95 352.8 283 66.4
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 3.1e-95 352.4 271 66.4
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 3.1e-95 352.4 239 77.0
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 4.1e-95 352.1 281 68.0
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 7.7e-94 347.8 266 67.7
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 6.5e-93 344.7 283 65.4
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 1.4e-92 343.6 285 64.9
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.8e-90 336.7 296 63.2
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 2.0e-89 333.2 223 77.1
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 7.4e-89 331.3 232 72.8
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 4.8e-88 328.6 272 61.4
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 3.8e-85 318.9 274 62.0
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 1.1e-84 317.4 268 60.8
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.1e-84 317.4 241 70.5
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.9e-84 316.6 267 63.7
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 3.2e-84 315.8 267 64.0
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 7.2e-84 314.7 225 72.0
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 8.0e-83 311.2 260 60.8
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 1.8e-82 310.1 268 58.2
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.3e-80 303.9 236 66.9
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.7e-80 303.5 262 61.8
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 6.3e-80 301.6 241 67.2
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 1.5e-76 290.4 391 45.0
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.0e-74 282.3 271 57.6
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.0e-69 267.7 279 53.4
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 3.2e-68 262.7 234 60.7
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 1.6e-62 243.8 264 50.4
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 9.5e-60 234.6 148 81.1
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 6.4e-56 221.9 183 68.3
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 3.9e-53 212.6 238 53.8
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 9.8e-49 198.0 122 88.5
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-48 197.2 143 68.5
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 5.4e-47 192.2 162 62.3
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 2.7e-46 189.9 181 63.0
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 3.6e-43 179.5 217 49.3
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 2.6e-41 173.3 214 54.2
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 2.2e-40 170.2 145 55.2
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 7.8e-38 161.8 134 66.4
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.5e-33 147.5 146 59.6
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 2.3e-29 133.7 119 61.3
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.6e-27 126.3 126 60.3
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 6.0e-22 109.0 81 70.4
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 6.6e-21 105.5 267 32.2
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.9e-20 104.0 80 70.0
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 2.8e-11 73.6 108 43.5
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 1.3e-08 64.7 48 60.4


User provided reference genes

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