Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 1.9e-49 198.7 92 100.0
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 5.5e-49 197.2 92 97.8
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.0e-47 193.0 92 96.7
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 1.8e-47 192.2 90 97.8
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 2.0e-46 188.7 92 93.5
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 4.8e-45 184.1 92 90.2
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 2.0e-43 178.7 92 89.1
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 7.7e-43 176.8 87 92.0
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 7.7e-43 176.8 87 92.0
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 1.0e-42 176.4 92 88.0
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 1.0e-42 176.4 92 88.0
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.0e-42 176.4 87 92.0
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 1.3e-42 176.0 87 92.0
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 2.9e-42 174.9 85 92.9
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 5.0e-42 174.1 92 85.9
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 8.5e-42 173.3 92 85.9
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 8.5e-42 173.3 92 83.7
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 2.5e-41 171.8 87 87.4
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 3.2e-41 171.4 87 88.5
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 4.2e-41 171.0 87 87.4
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 5.5e-41 170.6 87 87.4
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 5.5e-41 170.6 92 85.9
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 9.4e-41 169.9 92 84.8
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 1.6e-40 169.1 85 88.2
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 1.6e-40 169.1 92 84.8
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 2.7e-40 168.3 88 83.0
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 4.7e-40 167.5 86 86.0
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 4.7e-40 167.5 86 88.4
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 6.1e-40 167.2 92 82.6
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 6.1e-40 167.2 92 82.6
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 7.9e-40 166.8 87 86.2
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 7.9e-40 166.8 86 84.9
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 7.9e-40 166.8 89 84.3
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 7.9e-40 166.8 89 84.3
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 7.9e-40 166.8 89 84.3
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 1.0e-39 166.4 87 85.1
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.4e-39 166.0 92 81.5
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 1.4e-39 166.0 87 81.6
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 1.8e-39 165.6 85 84.7
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 2.3e-39 165.2 89 83.1
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 2.3e-39 165.2 85 89.4
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 3.0e-39 164.9 84 86.9
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 3.9e-39 164.5 87 82.8
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 5.2e-39 164.1 85 87.1
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 5.2e-39 164.1 86 84.9
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 6.7e-39 163.7 87 83.9
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 2.0e-38 162.2 85 83.5
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 2.0e-38 162.2 92 79.3
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 3.3e-38 161.4 84 84.5
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 4.4e-38 161.0 86 83.7
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 4.4e-38 161.0 86 83.7
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 4.4e-38 161.0 86 83.7
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 4.4e-38 161.0 86 83.7
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 4.4e-38 161.0 92 78.3
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 4.4e-38 161.0 89 80.9
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 5.7e-38 160.6 86 80.2
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 5.7e-38 160.6 84 84.5
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 1.7e-37 159.1 86 82.6
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 2.2e-37 158.7 84 85.7
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 2.8e-37 158.3 85 81.2
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 3.7e-37 157.9 84 83.3
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 3.7e-37 157.9 84 83.3
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 3.7e-37 157.9 86 77.9
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 4.8e-37 157.5 82 86.6
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 6.3e-37 157.1 85 81.2
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 6.3e-37 157.1 85 82.4
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 6.3e-37 157.1 87 78.2
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 6.3e-37 157.1 83 83.1
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 6.3e-37 157.1 83 86.7
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 6.3e-37 157.1 83 86.7
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 8.2e-37 156.8 86 79.1
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.1e-36 156.4 86 81.4
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 2.4e-36 155.2 86 77.9
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 2.4e-36 155.2 91 75.8
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 2.4e-36 155.2 90 76.7
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 3.1e-36 154.8 87 78.2
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 3.1e-36 154.8 84 81.0
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 4.1e-36 154.5 86 77.9
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 4.1e-36 154.5 86 77.9
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 5.3e-36 154.1 90 75.6
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 5.3e-36 154.1 90 75.6
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 5.3e-36 154.1 84 78.6
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.6e-35 152.5 82 82.9
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 1.6e-35 152.5 81 81.5
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 1.6e-35 152.5 88 76.1
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 2.0e-35 152.1 81 84.0
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 2.6e-35 151.8 83 78.3
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 3.5e-35 151.4 87 77.0
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 7.7e-35 150.2 85 78.8
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 7.7e-35 150.2 85 78.8
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 7.7e-35 150.2 85 78.8
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 7.7e-35 150.2 85 78.8
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 1.0e-34 149.8 81 80.2
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.7e-34 149.1 85 77.6
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 1.7e-34 149.1 85 77.6
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 1.7e-34 149.1 85 77.6
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 2.2e-34 148.7 85 77.6
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 2.2e-34 148.7 85 77.6
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 2.2e-34 148.7 85 77.6
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 2.2e-34 148.7 85 77.6
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 2.9e-34 148.3 85 77.6
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 2.7e-32 141.7 72 86.1
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 3.6e-32 141.4 83 77.1
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 1.4e-31 139.4 85 75.3
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 1.4e-31 139.4 85 74.1
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 5.2e-31 137.5 81 71.6
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 1.5e-30 136.0 83 69.9
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 2.0e-30 135.6 90 66.7
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 2.6e-30 135.2 90 67.8
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 7.5e-30 133.7 84 71.4
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 2.2e-29 132.1 86 69.8
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 8.2e-29 130.2 84 70.2
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 1.4e-28 129.4 84 70.2
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 3.1e-28 128.3 87 66.7
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 4.1e-28 127.9 72 72.2
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 5.0e-26 120.9 87 60.9
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 6.8e-23 110.5 70 71.4
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 6.8e-23 110.5 70 71.4
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 6.3e-21 104.0 84 51.2
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 5.4e-20 100.9 53 77.4
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 3.5e-19 98.2 82 48.8
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 3.8e-18 94.7 78 52.6
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 1.8e-15 85.9 78 46.2
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 8.8e-15 83.6 85 42.4
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 2.6e-14 82.0 70 54.3
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.3e-10 69.7 41 82.9
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 6.6e-10 67.4 86 47.7
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 2.0e-06 55.8 56 48.2
Zm00001eb053260 Zea mays HOM05D005988 ORTHO05D007392 7.5e-06 53.9 36 69.4


User provided reference genes

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