Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 6.7e-154 547.4 284 100.0
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.7e-70 269.6 224 68.8
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.1e-63 247.7 186 72.0
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 6.9e-42 175.3 232 53.0
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 3.9e-37 159.5 236 46.2
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 7.2e-31 138.7 232 42.7
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.2e-30 137.9 220 44.1
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 7.9e-30 135.2 219 42.9
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 1.3e-29 134.4 239 39.7
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 2.2e-27 127.1 241 39.8
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 5.9e-25 119.0 219 41.6
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 7.7e-25 118.6 225 40.0
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 2.5e-23 113.6 234 38.9
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 4.2e-23 112.8 155 45.8
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 1.2e-22 111.3 239 36.0
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 3.6e-22 109.8 221 39.4
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 1.0e-21 108.2 226 38.5
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 3.0e-21 106.7 252 38.5
Sabra01G0042900 Salix brachista HOM05D007269 ORTHO05D008531 3.0e-21 106.7 123 57.7
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 8.8e-21 105.1 225 35.6
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 6.3e-19 99.0 203 39.9
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 1.1e-18 98.2 233 34.3
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 1.1e-18 98.2 222 37.4
Gorai.002G023300 Gossypium raimondii HOM05D007269 ORTHO05D008531 1.4e-18 97.8 253 36.4
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 1.8e-18 97.4 185 40.0
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 3.1e-18 96.7 228 36.4
Gohir.D01G020800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 6.9e-18 95.5 259 35.9
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.2e-17 94.7 222 38.7
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.2e-17 94.7 222 35.6
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 3.4e-17 93.2 220 34.5
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 5.9e-17 92.4 221 34.4
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 2.2e-16 90.5 206 37.9
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.2e-16 90.5 222 34.2
Cfa009391 Carpinus fangiana HOM05D007269 ORTHO05D008531 3.8e-16 89.7 189 38.1
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 5.0e-16 89.4 240 32.9
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 6.5e-16 89.0 219 35.6
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.1e-15 88.2 254 35.8
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 1.9e-15 87.4 279 32.6
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 2.5e-15 87.0 235 37.4
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 3.2e-15 86.7 220 35.0
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 3.2e-15 86.7 219 33.3
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 4.2e-15 86.3 218 34.4
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 9.4e-15 85.1 225 33.3
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 4.7e-14 82.8 200 36.5
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 1.0e-13 81.6 231 32.9
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 1.0e-13 81.6 221 35.7
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 1.8e-13 80.9 221 32.1
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.3e-13 80.5 220 34.1
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.0e-13 80.1 218 33.9
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 3.9e-13 79.7 199 33.7
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 6.7e-13 79.0 218 33.9
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 6.7e-13 79.0 218 33.9
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.5e-12 77.8 218 33.0
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.0e-12 77.4 218 33.5
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 4.4e-12 76.3 218 33.5
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 9.7e-12 75.1 89 43.8
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 1.3e-11 74.7 231 32.0
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 1.3e-11 74.7 224 32.1
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 1.7e-11 74.3 211 32.2
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 1.7e-11 74.3 223 31.8
PSO017G1627 Papaver somniferum HOM05D007269 ORTHO05D008531 1.7e-11 74.3 181 36.5
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 2.2e-11 73.9 208 33.2
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 2.2e-11 73.9 208 33.2
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 4.8e-11 72.8 218 30.3
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.1e-10 71.6 220 33.6
CDE05G2305 Ceratophyllum demersum HOM05D007269 ORTHO05D008531 1.4e-10 71.2 216 30.1
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 1.4e-10 71.2 208 30.8
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 7.0e-10 68.9 201 29.9
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 9.1e-10 68.6 215 29.3
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 1.2e-09 68.2 224 31.2
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.6e-09 67.8 201 29.4
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 1.0e-08 65.1 184 32.1
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 1.7e-08 64.3 224 33.5
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 2.2e-08 63.9 215 29.3
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 2.2e-08 63.9 220 32.3
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.9e-08 63.5 201 28.9
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 5.0e-08 62.8 188 31.9
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 1.5e-07 61.2 173 30.1
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 2.5e-07 60.5 216 29.6
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 2.5e-07 60.5 216 28.7
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 4.2e-07 59.7 207 29.5
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 5.5e-07 59.3 239 29.7
TAR629G3154 Trochodendron aralioides HOM05D007269 ORTHO05D008531 5.5e-07 59.3 148 35.1
Zm00001eb142990 Zea mays HOM05D007269 ORTHO05D008531 7.2e-07 58.9 95 35.8
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 9.4e-07 58.5 228 30.7
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 9.4e-07 58.5 224 33.9
Os01g0924200 Oryza sativa ssp. japonica HOM05D007269 ORTHO05D008531 9.4e-07 58.5 112 37.5
TWI18G0336 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 1.6e-06 57.8 146 32.9
Rhsim12G0023500 Rhododendron simsii HOM05D007269 ORTHO05D008531 2.1e-06 57.4 176 31.2
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 2.7e-06 57.0 233 27.0
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 3.6e-06 56.6 228 28.9
Zm00001eb364140 Zea mays HOM05D007269 ORTHO05D008531 3.6e-06 56.6 145 29.0
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 6.1e-06 55.8 237 30.4
MELO3C022330.2 Cucumis melo HOM05D026927 ORTHO05D008531 8.0e-06 55.5 161 29.2


User provided reference genes

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