Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 1.2e-205 719.5 352 100.0
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 9.4e-182 640.2 352 90.6
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 2.4e-153 545.8 342 76.0
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 1.1e-150 537.0 326 80.1
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 7.2e-150 534.3 341 73.9
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 4.7e-149 531.6 314 79.3
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 8.0e-149 530.8 316 80.1
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 8.0e-149 530.8 345 73.6
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.4e-148 530.0 344 76.5
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 5.7e-147 524.6 300 81.3
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 1.3e-146 523.5 344 73.3
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 1.4e-145 520.0 303 80.9
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 1.4e-145 520.0 313 78.9
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 4.1e-145 518.5 341 74.2
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 1.2e-144 516.9 311 78.5
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 5.9e-144 514.6 311 77.8
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 7.8e-144 514.2 332 73.8
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 1.0e-143 513.8 350 71.7
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 1.3e-143 513.5 332 73.5
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.7e-143 513.1 311 77.5
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 6.6e-143 511.1 311 77.8
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 6.6e-143 511.1 311 77.8
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 1.9e-142 509.6 332 73.5
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 1.2e-141 506.9 303 78.2
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 4.7e-141 505.0 306 77.1
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 1.0e-140 503.8 299 77.6
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 1.8e-140 503.1 340 70.9
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 3.1e-140 502.3 327 72.5
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 4.0e-140 501.9 341 71.0
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 5.2e-140 501.5 340 71.2
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 2.0e-139 499.6 341 71.3
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 9.8e-139 497.3 308 74.7
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 2.4e-137 492.7 341 69.5
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 3.2e-137 492.3 293 76.5
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 4.1e-137 491.9 303 77.9
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 5.4e-137 491.5 329 72.0
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 9.2e-137 490.7 285 77.9
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.2e-136 490.3 334 71.0
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 1.2e-136 490.3 342 69.0
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 1.6e-136 490.0 306 75.2
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 1.6e-136 490.0 313 72.2
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 2.7e-136 489.2 284 78.2
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 3.5e-136 488.8 320 75.0
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 6.0e-136 488.0 304 73.4
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 6.0e-136 488.0 315 73.7
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 7.8e-136 487.6 330 71.8
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 1.7e-135 486.5 342 68.7
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 3.0e-135 485.7 326 72.4
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 3.9e-135 485.3 302 74.5
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 3.9e-135 485.3 340 69.4
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 5.0e-135 485.0 285 76.1
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 5.0e-135 485.0 289 77.9
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 8.6e-135 484.2 310 71.3
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 8.6e-135 484.2 286 77.6
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.1e-134 483.8 303 74.3
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 1.5e-134 483.4 337 69.4
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 1.9e-134 483.0 316 72.2
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 1.9e-134 483.0 308 73.4
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 4.3e-134 481.9 292 78.1
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 5.6e-134 481.5 336 69.3
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 5.6e-134 481.5 302 73.8
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 5.6e-134 481.5 318 72.6
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 3.6e-133 478.8 285 76.5
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 6.2e-133 478.0 345 68.1
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 1.4e-132 476.9 344 67.7
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 1.4e-132 476.9 288 76.4
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 1.8e-132 476.5 344 67.7
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 4.0e-132 475.3 314 70.7
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 5.2e-132 474.9 302 74.2
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 3.4e-131 472.2 335 67.8
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 3.4e-131 472.2 285 74.4
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 4.9e-130 468.4 271 79.0
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 8.3e-130 467.6 322 69.3
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 5.4e-129 464.9 293 74.1
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 5.4e-129 464.9 293 74.1
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 2.7e-128 462.6 290 69.3
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 4.6e-128 461.8 365 65.8
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 1.9e-126 456.4 307 68.4
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.8e-124 449.9 322 66.8
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 2.0e-123 446.4 283 72.1
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 1.9e-121 439.9 262 76.7
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 9.2e-121 437.6 306 70.3
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 2.5e-118 429.5 247 79.4
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 2.5e-118 429.5 285 70.5
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 4.0e-116 422.2 248 77.0
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.5e-115 420.2 253 76.3
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 4.4e-115 418.7 288 65.6
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 1.3e-114 417.2 246 78.5
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 2.1e-112 409.8 244 75.4
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 2.8e-109 399.4 292 62.3
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 2.4e-108 396.4 304 58.9
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 7.1e-105 384.8 258 74.8
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 3.9e-103 379.0 304 58.9
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 1.5e-102 377.1 298 57.7
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 3.6e-101 372.5 301 60.5
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 3.8e-98 362.5 282 58.2
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 2.1e-85 320.1 197 74.1
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 6.1e-72 275.4 293 48.1
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 1.2e-67 261.2 160 76.2
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 1.8e-63 247.3 146 78.1
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 1.6e-51 207.6 114 78.9
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.5e-49 201.1 109 78.0
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 2.6e-46 190.3 130 71.5
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 7.0e-44 182.2 283 37.8
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.0e-43 180.6 103 80.6
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.5e-41 173.7 111 73.0
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 6.3e-37 159.1 156 54.5
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.0e-31 141.7 155 53.5
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 4.9e-29 132.9 86 73.3
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 5.8e-22 109.4 137 47.4
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 1.4e-15 88.2 55 69.1
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 8.9e-15 85.5 49 77.6
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 1.1e-12 78.6 41 82.9
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 6.0e-11 72.8 99 45.5
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 5.6e-09 66.2 42 69.0


User provided reference genes

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