Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 2.7e-149 531.9 261 100.0
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 2.3e-92 342.8 245 67.3
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 5.1e-92 341.7 243 67.5
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 1.8e-89 333.2 237 66.7
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 3.1e-89 332.4 241 66.0
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 5.3e-89 331.6 242 66.1
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 2.0e-88 329.7 169 94.1
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 5.9e-88 328.2 246 65.0
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 2.9e-87 325.9 228 66.7
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 2.5e-86 322.8 246 64.6
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 5.5e-86 321.6 242 64.5
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 7.2e-86 321.2 243 64.2
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.2e-85 320.5 243 65.8
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 2.7e-85 319.3 246 62.6
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 1.0e-84 317.4 239 64.9
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 1.0e-84 317.4 216 67.6
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 8.7e-84 314.3 240 62.5
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 1.9e-83 313.2 240 63.3
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 3.3e-83 312.4 246 64.2
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 5.7e-83 311.6 240 62.1
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 6.3e-82 308.1 247 62.8
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 1.8e-81 306.6 236 61.9
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 2.4e-81 306.2 245 61.2
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 5.3e-81 305.1 207 68.1
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 2.9e-79 299.3 239 61.1
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 3.8e-79 298.9 206 67.5
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 5.5e-78 295.0 243 60.1
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 7.2e-78 294.7 245 59.6
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 3.6e-77 292.4 242 59.1
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 7.9e-77 291.2 239 59.8
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 1.1e-75 287.3 215 63.7
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 2.0e-75 286.6 219 62.6
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 2.5e-75 286.2 213 63.4
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 3.3e-75 285.8 213 63.4
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 1.7e-74 283.5 242 57.4
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 2.2e-74 283.1 224 59.4
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.8e-74 282.7 252 57.9
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 8.2e-74 281.2 245 60.4
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 8.2e-74 281.2 246 58.1
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 8.2e-74 281.2 247 59.1
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.4e-73 280.4 242 58.3
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 1.8e-73 280.0 214 61.7
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 2.4e-73 279.6 249 56.2
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.1e-73 277.7 219 60.3
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.5e-72 276.9 252 54.8
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 1.5e-72 276.9 197 68.0
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 2.0e-72 276.6 227 61.7
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 2.6e-72 276.2 254 54.3
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 4.5e-72 275.4 236 59.3
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 7.7e-72 274.6 230 58.7
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 5.0e-71 271.9 223 61.0
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 1.1e-70 270.8 229 58.1
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 7.2e-70 268.1 218 59.2
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.6e-69 266.9 180 69.4
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 2.7e-69 266.2 243 57.2
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 2.7e-69 266.2 229 59.0
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 4.7e-69 265.4 209 61.7
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 6.1e-69 265.0 239 56.5
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 7.9e-69 264.6 209 62.2
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 1.0e-68 264.2 211 61.1
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 2.3e-68 263.1 241 57.3
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 2.3e-68 263.1 242 57.9
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 3.0e-68 262.7 244 56.1
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 3.9e-68 262.3 242 54.5
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.0e-67 260.0 251 53.4
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 2.0e-67 260.0 215 59.1
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 5.7e-67 258.5 209 61.2
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 7.4e-67 258.1 211 59.7
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 7.4e-67 258.1 267 53.9
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 4.8e-66 255.4 243 53.5
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 4.8e-66 255.4 243 53.5
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 4.8e-66 255.4 191 64.4
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 8.2e-66 254.6 279 50.5
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 1.8e-65 253.4 241 55.2
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 3.1e-65 252.7 209 60.8
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 4.1e-65 252.3 281 52.0
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 5.3e-65 251.9 230 56.5
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.2e-64 250.8 232 56.0
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 2.6e-64 249.6 210 62.4
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 4.5e-64 248.8 210 61.9
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 5.9e-64 248.4 242 53.7
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 1.2e-61 240.7 173 67.6
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 3.0e-60 236.1 214 56.5
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 4.0e-60 235.7 205 58.0
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 2.0e-59 233.4 241 51.0
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 1.2e-56 224.2 196 56.6
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 1.2e-56 224.2 177 61.0
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 2.7e-56 223.0 183 60.1
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 1.0e-55 221.1 196 55.6
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 6.1e-53 211.8 247 47.8
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 8.0e-53 211.5 252 48.0
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 2.6e-51 206.5 237 50.6
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.7e-50 203.8 212 48.6
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 3.1e-49 199.5 160 61.2
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.1e-49 198.0 172 57.6
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.7e-48 196.4 162 58.6
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 1.0e-47 194.5 208 49.0
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 3.7e-42 176.0 147 56.5
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 2.3e-39 166.8 188 45.7
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 2.9e-39 166.4 199 45.2
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 8.6e-39 164.9 137 56.9
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 4.7e-37 159.1 163 51.5
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 1.4e-36 157.5 126 59.5
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 4.0e-36 156.0 231 39.8
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 2.7e-24 116.7 135 49.6
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 9.5e-22 108.2 76 64.5
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.1e-21 107.1 62 72.6
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 8.9e-20 101.7 68 67.6
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 4.6e-16 89.4 122 37.7
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 1.3e-15 87.8 180 34.4
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.1e-14 84.7 66 59.1
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 4.7e-13 79.3 85 48.2
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 4.7e-13 79.3 151 33.1
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.1e-12 78.2 183 35.5
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.1e-12 78.2 86 47.7
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.9e-10 70.1 54 57.4
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 3.8e-10 69.7 35 77.1
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.9e-09 67.4 34 76.5
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 1.3e-07 61.2 41 58.5
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 7.3e-06 55.5 78 37.2


User provided reference genes

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