Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0111300 Salix brachista HOM05D006944 ORTHO05D009910 2.5e-44 181.8 95 100.0
Sabra03G0111100 Salix brachista HOM05D006944 ORTHO05D009910 2.1e-35 152.1 83 94.0
Sabra03G0069600 Salix brachista HOM05D006944 ORTHO05D009910 4.2e-20 101.3 93 59.1
Potri.003G152900 Populus trichocarpa HOM05D006944 ORTHO05D009910 2.1e-19 99.0 93 60.2
Potri.003G101900 Populus trichocarpa HOM05D006944 ORTHO05D009910 4.4e-17 91.3 89 60.7
Potri.003G102000 Populus trichocarpa HOM05D006944 ORTHO05D009910 9.8e-17 90.1 89 59.6
Sabra01G0101600 Salix brachista HOM05D006944 ORTHO05D009910 2.8e-16 88.6 83 57.8
COL.COLO4_32286 Corchorus olitorius HOM05D006944 ORTHO05D009910 2.0e-14 82.4 86 50.0
Gohir.A13G124500 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.5e-14 81.6 89 46.1
Duzib213G0044 Durio zibethinus HOM05D006944 ORTHO05D009910 4.5e-14 81.3 83 51.8
Thecc.05G191200 Theobroma cacao HOM05D006944 ORTHO05D035094 5.9e-14 80.9 89 47.2
Thecc.07G172800 Theobroma cacao HOM05D006944 ORTHO05D009910 5.9e-14 80.9 85 52.9
Duzib187G0489 Durio zibethinus HOM05D006944 ORTHO05D009910 7.7e-14 80.5 89 47.2
COL.COLO4_32294 Corchorus olitorius HOM05D006944 ORTHO05D009910 1.0e-13 80.1 79 54.4
Thecc.07G173400 Theobroma cacao HOM05D006944 ORTHO05D009910 1.7e-13 79.3 83 50.6
COL.COLO4_32290 Corchorus olitorius HOM05D006944 ORTHO05D009910 2.3e-13 79.0 82 48.8
Thecc.K0001700 Theobroma cacao HOM05D006944 ORTHO05D009910 1.9e-12 75.9 85 49.4
Duzib093G0469 Durio zibethinus HOM05D006944 ORTHO05D035085 3.2e-12 75.1 89 47.2
COL.COLO4_32292 Corchorus olitorius HOM05D006944 ORTHO05D009910 4.2e-12 74.7 72 52.8
Duzib213G0640 Durio zibethinus HOM05D006944 ORTHO05D009910 5.5e-12 74.3 89 43.8
Duzib213G0882 Durio zibethinus HOM05D006944 ORTHO05D009910 5.5e-12 74.3 86 45.3
Duzib187G0307 Durio zibethinus HOM05D006944 ORTHO05D009910 9.5e-12 73.6 86 44.2
Potri.001G078200 Populus trichocarpa HOM05D006944 ORTHO05D009910 9.5e-12 73.6 91 49.5
Thecc.05G142700 Theobroma cacao HOM05D006944 ORTHO05D009910 2.1e-11 72.4 89 46.1
Sabra01G0055400 Salix brachista HOM05D006944 ORTHO05D009910 2.8e-11 72.0 87 48.3
Thecc.05G191600 Theobroma cacao HOM05D006944 ORTHO05D009910 2.8e-11 72.0 86 46.5
Gohir.A13G125001 Gossypium hirsutum HOM05D006944 ORTHO05D009910 4.7e-11 71.2 85 50.6
Potri.003G152100 Populus trichocarpa HOM05D011228 ORTHO05D015182 4.7e-11 71.2 89 47.2
Gorai.004G269200 Gossypium raimondii HOM05D006944 ORTHO05D009910 1.0e-10 70.1 86 44.2
Gohir.A08G232050 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.4e-10 69.7 86 44.2
Thecc.02G266200 Theobroma cacao HOM05D011192 ORTHO05D015638 1.4e-10 69.7 92 44.6
Gohir.A03G217500 Gossypium hirsutum HOM05D006944 ORTHO05D036044 2.3e-10 68.9 87 43.7
Gohir.D13G128401 Gossypium hirsutum HOM05D006944 ORTHO05D048132 2.3e-10 68.9 80 46.2
Gohir.D13G128600 Gossypium hirsutum HOM05D006944 ORTHO05D046837 2.3e-10 68.9 85 49.4
TWI38G0421 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 2.3e-10 68.9 89 42.7
TWI38G0902 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 4.0e-10 68.2 86 44.2
Gorai.013G144700 Gossypium raimondii HOM05D006944 ORTHO05D046837 5.2e-10 67.8 85 49.4
Gohir.D08G252466 Gossypium hirsutum HOM05D006944 ORTHO05D009910 6.8e-10 67.4 83 44.6
Potri.001G131500 Populus trichocarpa HOM05D006944 ORTHO05D009910 6.8e-10 67.4 59 59.3
Duzib138G0371 Durio zibethinus HOM05D011192 ORTHO05D015638 8.8e-10 67.0 89 42.7
Gorai.013G144300 Gossypium raimondii HOM05D006944 ORTHO05D048132 8.8e-10 67.0 79 45.6
Duzib128G1583 Durio zibethinus HOM05D006944 ORTHO05D009910 1.2e-09 66.6 67 52.2
TWI15G0253 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 1.2e-09 66.6 89 42.7
Gohir.D13G128233 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.5e-09 66.2 89 38.2
TWI38G2111 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 2.0e-09 65.9 89 42.7
Gohir.A08G232200 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.4e-09 65.1 86 38.4
Duzib052G0351 Durio zibethinus HOM05D006944 ORTHO05D013071 4.4e-09 64.7 84 40.5
Gohir.A13G124825 Gossypium hirsutum HOM05D006944 ORTHO05D009910 4.4e-09 64.7 84 40.5
Gohir.D02G239500 Gossypium hirsutum HOM05D006944 ORTHO05D009910 5.7e-09 64.3 87 41.4
Thecc.07G175300 Theobroma cacao HOM05D006944 ORTHO05D009910 5.7e-09 64.3 61 54.1
Gorai.013G143700 Gossypium raimondii HOM05D006944 ORTHO05D009910 7.5e-09 63.9 83 38.6
TWI38G1618 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 7.5e-09 63.9 88 39.8
Gorai.005G267800 Gossypium raimondii HOM05D006944 ORTHO05D036044 9.8e-09 63.5 87 40.2
Thecc.05G142800 Theobroma cacao HOM05D006944 ORTHO05D035085 9.8e-09 63.5 89 41.6
Thecc.07G173000 Theobroma cacao HOM05D006944 ORTHO05D009910 9.8e-09 63.5 85 45.9
Duzib213G0468 Durio zibethinus HOM05D006944 ORTHO05D009910 1.3e-08 63.2 80 41.2
TWI38G0857 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 1.3e-08 63.2 93 39.8
TWI63G0079 Tripterygium wilfordii HOM05D029604 ORTHO05D030703 1.3e-08 63.2 83 42.2
Potri.001G422000 Populus trichocarpa HOM05D014998 ORTHO05D018092 2.2e-08 62.4 92 45.7
TWI63G0374 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 2.2e-08 62.4 89 42.7
TWI63G1346 Tripterygium wilfordii HOM05D029604 ORTHO05D030703 2.2e-08 62.4 83 42.2
Duzib128G1252 Durio zibethinus HOM05D006944 ORTHO05D186093 3.7e-08 61.6 55 56.4
COL.COLO4_32287 Corchorus olitorius HOM05D006944 ORTHO05D009910 4.9e-08 61.2 61 50.8
Duzib213G1066 Durio zibethinus HOM05D006944 ORTHO05D009910 4.9e-08 61.2 61 52.5
Thecc.07G164100 Theobroma cacao HOM05D006944 ORTHO05D045182 4.9e-08 61.2 58 58.6
Thecc.07G175800 Theobroma cacao HOM05D006944 ORTHO05D009910 4.9e-08 61.2 61 50.8
Duzib032G0001 Durio zibethinus HOM05D006944 ORTHO05D035094 6.3e-08 60.8 91 38.5
Duzib128G1158 Durio zibethinus HOM05D006944 ORTHO05D035094 6.3e-08 60.8 91 38.5
Gohir.A01G098051 Gossypium hirsutum HOM05D006944 ORTHO05D009910 6.3e-08 60.8 83 42.2
Potri.003G102300 Populus trichocarpa HOM05D014998 ORTHO05D018092 6.3e-08 60.8 86 45.3
TWI38G1226 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 6.3e-08 60.8 85 42.4
COL.COLO4_03335 Corchorus olitorius HOM05D006944 ORTHO05D009910 8.3e-08 60.5 58 51.7
Duzib268G0495 Durio zibethinus HOM05D006944 ORTHO05D009910 1.1e-07 60.1 61 50.8
Duzib268G0833 Durio zibethinus HOM05D006944 ORTHO05D009910 1.1e-07 60.1 61 49.2
COL.COLO4_03334 Corchorus olitorius HOM05D006944 ORTHO05D015628 1.4e-07 59.7 65 50.8
Duzib187G0900 Durio zibethinus HOM05D006944 ORTHO05D009910 1.4e-07 59.7 89 40.4
Duzib211G0488 Durio zibethinus HOM05D006944 ORTHO05D009910 1.4e-07 59.7 54 53.7
Thecc.07G174800 Theobroma cacao HOM05D006944 ORTHO05D009910 1.4e-07 59.7 61 54.1
Thecc.07G175700 Theobroma cacao HOM05D006944 ORTHO05D009910 1.4e-07 59.7 66 48.5
Duzib213G0885 Durio zibethinus HOM05D006944 ORTHO05D186234 2.4e-07 58.9 66 47.0
Gohir.A01G098001 Gossypium hirsutum HOM05D006944 ORTHO05D009910 5.4e-07 57.8 68 45.6
Gohir.D02G239400 Gossypium hirsutum HOM05D006944 ORTHO05D036044 5.4e-07 57.8 87 40.2
Thecc.05G191800 Theobroma cacao HOM05D006944 ORTHO05D407174 5.4e-07 57.8 86 38.4
Gohir.D13G128266 Gossypium hirsutum HOM05D011997 ORTHO05D015628 7.0e-07 57.4 78 35.9
Gorai.005G267700 Gossypium raimondii HOM05D006944 ORTHO05D009910 9.2e-07 57.0 87 40.2
Gohir.D13G128451 Gossypium hirsutum HOM05D006944 ORTHO05D047026 1.2e-06 56.6 83 41.0
Gohir.A07G203400 Gossypium hirsutum HOM05D011192 ORTHO05D015638 2.0e-06 55.8 89 36.0
Sabra16G0286700 Salix brachista HOM05D014998 ORTHO05D018092 2.0e-06 55.8 92 42.4
TWI38G0458 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 2.0e-06 55.8 86 41.9
TWI15G0784 Tripterygium wilfordii HOM05D006944 ORTHO05D030703 2.7e-06 55.5 82 36.6
TWI15G1222 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 2.7e-06 55.5 89 40.4
Sabra16G0287100 Salix brachista HOM05D014998 ORTHO05D018092 3.5e-06 55.1 89 39.3
Thecc.07G174000 Theobroma cacao HOM05D011997 ORTHO05D015628 3.5e-06 55.1 57 43.9
Gohir.D07G209600 Gossypium hirsutum HOM05D011192 ORTHO05D015638 4.5e-06 54.7 89 34.8
TWI15G0074 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 4.5e-06 54.7 83 42.2
Gorai.013G144400 Gossypium raimondii HOM05D006944 ORTHO05D047026 7.8e-06 53.9 83 39.8
Sabra16G0286900 Salix brachista HOM05D014998 ORTHO05D018092 7.8e-06 53.9 92 41.3
Thecc.07G174200 Theobroma cacao HOM05D011997 ORTHO05D015628 7.8e-06 53.9 55 47.3
Thecc.07G174400 Theobroma cacao HOM05D011997 ORTHO05D015628 7.8e-06 53.9 55 47.3
Thecc.07G174600 Theobroma cacao HOM05D011997 ORTHO05D015628 7.8e-06 53.9 55 47.3


User provided reference genes

Program Settings