Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 2.0e-214 748.8 375 100.0
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 9.0e-199 696.8 369 93.8
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 2.3e-154 549.3 371 73.3
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 3.0e-154 548.9 362 75.4
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 6.7e-154 547.7 371 73.0
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 3.3e-153 545.4 362 74.6
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 1.3e-152 543.5 359 73.8
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 2.2e-152 542.7 361 74.5
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 4.8e-152 541.6 364 72.5
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 1.8e-151 539.7 366 72.1
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.1e-151 538.9 364 72.8
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 1.7e-149 533.1 396 68.2
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.7e-149 533.1 364 72.3
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 2.9e-149 532.3 361 72.9
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 3.8e-149 531.9 357 72.3
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 4.2e-148 528.5 359 72.1
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 1.2e-147 526.9 361 69.3
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 1.2e-147 526.9 362 71.5
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 1.6e-147 526.6 353 75.1
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.1e-147 526.2 368 69.6
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 6.1e-147 524.6 355 73.5
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 8.0e-147 524.2 364 70.1
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 8.0e-147 524.2 360 71.7
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 1.0e-146 523.9 358 72.6
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.4e-146 523.5 355 73.2
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 2.0e-145 519.6 364 69.8
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 2.6e-145 519.2 355 71.8
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 4.4e-145 518.5 365 69.6
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 5.7e-145 518.1 364 71.4
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 3.7e-144 515.4 358 70.7
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 4.8e-144 515.0 360 70.3
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 1.4e-143 513.5 365 68.5
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 5.4e-143 511.5 365 68.8
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 7.0e-143 511.1 358 70.1
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 9.1e-143 510.8 355 70.7
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 9.1e-143 510.8 361 70.1
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 1.2e-142 510.4 359 67.4
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 2.0e-142 509.6 365 68.8
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 3.5e-142 508.8 361 69.5
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 3.5e-142 508.8 361 69.5
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 3.5e-142 508.8 361 69.5
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 5.9e-142 508.1 358 69.3
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 7.7e-142 507.7 355 69.9
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 6.6e-141 504.6 361 69.3
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 1.1e-140 503.8 360 67.2
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 1.9e-140 503.1 324 78.7
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 4.2e-140 501.9 365 67.4
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 3.6e-139 498.8 361 68.7
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 4.7e-139 498.4 361 68.4
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 1.0e-138 497.3 356 66.3
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 1.8e-138 496.5 359 68.8
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 4.0e-138 495.4 358 67.9
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 6.8e-138 494.6 358 66.2
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 8.9e-138 494.2 358 67.6
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 1.2e-137 493.8 362 69.1
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.5e-137 493.4 364 68.1
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 3.4e-137 492.3 368 65.5
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 4.4e-137 491.9 365 63.8
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 7.5e-137 491.1 358 67.0
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 3.1e-135 485.7 361 64.8
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 3.5e-134 482.3 359 65.5
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 3.9e-133 478.8 401 61.6
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 5.0e-133 478.4 324 73.1
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 6.6e-133 478.0 324 74.1
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 8.6e-133 477.6 360 66.1
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 2.5e-132 476.1 324 73.5
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 4.3e-132 475.3 419 58.7
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 1.2e-131 473.8 356 65.7
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 7.5e-129 464.5 360 65.6
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 8.3e-128 461.1 356 63.5
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 7.0e-127 458.0 357 63.0
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 5.0e-125 451.8 332 68.1
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 9.5e-124 447.6 356 60.7
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 6.2e-123 444.9 319 69.3
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 1.1e-122 444.1 360 59.7
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 1.4e-119 433.7 361 57.6
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 6.0e-118 428.3 292 74.0
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 3.9e-117 425.6 364 59.6
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 8.6e-117 424.5 361 59.6
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.8e-114 416.8 356 60.1
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 5.6e-100 368.6 230 77.0
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 9.0e-98 361.3 362 48.9
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.2e-95 352.8 356 53.4
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 3.2e-95 352.8 244 72.5
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 1.6e-94 350.5 358 53.4
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 3.0e-93 346.3 348 50.0
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 2.6e-89 333.2 333 51.7
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 1.0e-85 321.2 336 47.9
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 3.1e-74 283.1 211 67.3
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 1.7e-72 277.3 305 52.5
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 3.0e-69 266.5 493 34.3
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 3.4e-65 253.1 179 65.9
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 3.2e-63 246.5 186 65.1
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.2e-41 174.9 168 53.6
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.0e-40 171.8 136 62.5
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.0e-40 171.8 136 62.5
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 3.5e-33 146.7 260 37.3
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 5.7e-28 129.4 171 43.9
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.2e-20 105.1 88 56.8
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 8.3e-19 99.0 87 50.6
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 9.2e-18 95.5 80 63.8
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 5.0e-16 89.7 84 44.0
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 2.1e-14 84.3 54 79.6
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 2.8e-06 57.4 45 57.8


User provided reference genes

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