Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 8.7e-99 363.6 181 100.0
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 5.5e-93 344.4 181 94.5
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 6.7e-83 310.8 181 84.5
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 2.1e-76 289.3 181 79.6
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 2.7e-68 262.3 181 72.4
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 8.5e-62 240.7 179 65.9
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 2.0e-55 219.5 182 61.0
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 1.1e-53 213.8 181 58.0
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 3.2e-53 212.2 181 59.1
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 4.2e-53 211.8 180 60.0
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 4.2e-53 211.8 181 58.0
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 1.2e-52 210.3 180 56.7
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 2.7e-52 209.1 181 56.4
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 1.4e-51 206.8 182 57.7
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 5.2e-51 204.9 177 56.5
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 6.8e-51 204.5 179 54.7
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 8.8e-51 204.1 182 56.0
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.5e-50 203.4 178 57.3
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 2.0e-50 203.0 182 57.1
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 2.0e-50 203.0 182 54.4
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 2.6e-50 202.6 181 56.4
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 3.4e-50 202.2 181 56.4
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 3.4e-50 202.2 182 57.7
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 5.7e-50 201.4 178 56.7
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 9.8e-50 200.7 181 56.4
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 4.8e-49 198.4 181 53.6
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 8.3e-49 197.6 179 58.1
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.4e-48 196.8 181 51.9
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 1.8e-48 196.4 179 55.3
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 2.4e-48 196.1 179 54.2
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 2.4e-48 196.1 174 55.2
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 3.1e-48 195.7 181 55.8
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 4.1e-48 195.3 181 54.7
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 1.6e-47 193.4 179 55.3
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.7e-47 192.6 182 52.7
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.7e-47 192.6 182 52.7
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 3.5e-47 192.2 182 53.3
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 3.5e-47 192.2 182 53.3
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 5.9e-47 191.4 182 53.8
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 7.7e-47 191.0 181 50.8
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 1.3e-46 190.3 179 54.2
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 1.7e-46 189.9 172 55.2
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 2.3e-46 189.5 181 51.9
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 2.3e-46 189.5 180 52.8
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.3e-46 189.5 182 53.3
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 2.9e-46 189.1 172 54.1
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 3.8e-46 188.7 181 49.7
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 5.0e-46 188.3 176 55.7
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 1.1e-45 187.2 182 52.2
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 1.5e-45 186.8 182 52.2
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 9.5e-45 184.1 175 54.9
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 1.2e-44 183.7 182 53.8
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 1.2e-44 183.7 182 52.7
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 1.6e-44 183.3 168 54.8
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 1.6e-44 183.3 182 52.7
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 2.8e-44 182.6 182 52.7
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 6.1e-44 181.4 178 51.1
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 6.1e-44 181.4 182 50.0
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 6.1e-44 181.4 182 50.0
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 1.0e-43 180.6 181 53.0
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 4.0e-43 178.7 182 49.5
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 6.8e-43 177.9 175 53.7
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 8.9e-43 177.6 174 52.3
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 9.8e-42 174.1 172 52.9
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 9.8e-42 174.1 176 50.6
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 1.8e-40 169.9 181 49.7
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 4.1e-40 168.7 183 50.3
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 7.0e-40 167.9 180 50.6
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 7.0e-40 167.9 183 50.3
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 1.2e-39 167.2 170 48.2
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 2.3e-38 162.9 181 49.2
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 3.9e-38 162.2 165 48.5
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 6.6e-38 161.4 172 50.0
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.1e-37 160.6 172 48.8
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 1.5e-37 160.2 180 45.0
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 1.5e-37 160.2 117 63.2
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 2.5e-37 159.5 173 48.6
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 2.5e-37 159.5 170 48.8
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 3.3e-37 159.1 168 48.8
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 4.3e-37 158.7 178 47.2
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 7.3e-37 157.9 179 48.0
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 7.3e-37 157.9 171 46.2
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 9.5e-37 157.5 170 46.5
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 9.5e-37 157.5 179 45.8
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 1.6e-36 156.8 170 47.6
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 2.1e-36 156.4 183 48.6
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 2.1e-36 156.4 181 47.0
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 2.1e-36 156.4 170 47.1
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 3.6e-36 155.6 176 48.9
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 4.7e-36 155.2 170 49.4
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 6.1e-36 154.8 181 46.4
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 8.0e-36 154.5 180 50.0
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 8.0e-36 154.5 171 47.4
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 2.3e-35 152.9 179 48.0
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 3.1e-35 152.5 119 59.7
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 5.2e-35 151.8 179 44.1
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 5.2e-35 151.8 176 46.0
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 5.2e-35 151.8 170 45.9
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 6.8e-35 151.4 179 43.6
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 6.8e-35 151.4 171 45.6
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 8.9e-35 151.0 179 43.6
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 8.9e-35 151.0 179 43.6
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 1.2e-34 150.6 179 43.6
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 1.5e-34 150.2 181 45.3
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 1.5e-34 150.2 180 44.4
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 1.5e-34 150.2 189 46.6
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 2.0e-34 149.8 170 46.5
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 7.5e-34 147.9 182 45.1
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 7.5e-34 147.9 182 45.1
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 3.7e-33 145.6 170 45.9
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 4.9e-33 145.2 174 43.7
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 6.4e-33 144.8 175 45.1
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 8.3e-33 144.4 182 44.5
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 8.3e-33 144.4 182 44.5
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 1.1e-32 144.1 179 43.0
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 9.2e-32 141.0 190 45.3
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 1.6e-31 140.2 177 44.1
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 2.0e-31 139.8 177 44.6
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 6.0e-31 138.3 175 44.6
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 1.3e-30 137.1 182 45.1
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 1.3e-30 137.1 176 44.3
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.7e-30 136.7 179 44.7
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 6.6e-30 134.8 183 42.6
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 7.3e-29 131.3 172 44.8
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 2.3e-27 126.3 175 41.7
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 7.5e-26 121.3 111 54.1
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 1.9e-24 116.7 171 40.4
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 1.2e-20 104.0 114 49.1
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 4.0e-19 99.0 175 36.0
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 4.6e-15 85.5 186 29.0
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.1e-08 64.3 170 28.2
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 3.2e-08 62.8 182 27.5
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 4.2e-08 62.4 108 36.1


User provided reference genes

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