Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0072700 Salix brachista HOM05D007551 ORTHO05D009424 9.4e-137 491.9 250 100.0
Potri.003G105700 Populus trichocarpa HOM05D007551 ORTHO05D009424 2.7e-123 447.2 250 91.6
Manes.17G006200 Manihot esculenta HOM05D007551 ORTHO05D009424 2.2e-77 294.7 244 62.7
Dinv37453 Davidia involucrata HOM05D007551 ORTHO05D009424 1.1e-68 265.8 246 56.9
Prupe.3G018200 Prunus persica HOM05D007551 ORTHO05D009424 1.7e-66 258.5 246 57.3
CiPaw.12G053700 Carya illinoinensis HOM05D007551 ORTHO05D009424 2.3e-66 258.1 246 58.5
FvH4_5g24430 Fragaria vesca HOM05D007551 ORTHO05D009424 2.3e-66 258.1 247 54.3
Ciclev10000274m.g Citrus clementina HOM05D007551 ORTHO05D009424 1.9e-65 255.0 246 55.7
GSVIVG01036918001 Vitis vinifera HOM05D007551 ORTHO05D009424 3.6e-64 250.8 246 55.7
TWI60G1073 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 1.1e-63 249.2 246 56.1
QL11p054679 Quercus lobata HOM05D007551 ORTHO05D009424 2.4e-63 248.1 252 56.7
Cfa012637 Carpinus fangiana HOM05D007551 ORTHO05D009424 9.0e-63 246.1 249 56.2
Hma1.2p1_0294F.1_g116420 Hydrangea macrophylla HOM05D007551 ORTHO05D009424 1.2e-62 245.7 257 54.1
FAN13G0867 Fragaria x ananassa HOM05D007551 ORTHO05D009424 4.5e-62 243.8 247 52.6
Atru.chr6.2125 Acer truncatum HOM05D007551 ORTHO05D009424 3.8e-61 240.7 191 63.9
TWI34G0706 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 6.4e-61 240.0 246 56.1
MD06G1022200 Malus domestica HOM05D007551 ORTHO05D009424 1.4e-60 238.8 251 55.8
EL10Ac5g11872 Beta vulgaris HOM05D007551 ORTHO05D009424 1.3e-58 232.3 247 50.2
RcHm_v2.0_Chr7g0214821 Rosa chinensis HOM05D007551 ORTHO05D009424 2.3e-58 231.5 207 57.5
TAR362G0203 Trochodendron aralioides HOM05D007551 ORTHO05D009424 1.1e-57 229.2 247 53.0
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 3.3e-57 227.6 247 51.0
RcHm_v2.0_Chr7g0219861 Rosa chinensis HOM05D007551 ORTHO05D009424 1.3e-56 225.7 246 50.0
Rhsim04G0146500 Rhododendron simsii HOM05D007551 ORTHO05D009424 3.8e-53 214.2 244 52.5
Gohir.A12G200366 Gossypium hirsutum HOM05D007551 ORTHO05D009424 6.5e-53 213.4 248 50.4
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 1.1e-52 212.6 246 48.4
Ah.12g056170 Amaranthus hybridus HOM05D000351 ORTHO05D009424 4.2e-52 210.7 250 50.4
Gorai.N026600 Gossypium raimondii HOM05D007551 ORTHO05D009424 7.1e-52 209.9 251 49.0
Haze_08024 Corylus avellana HOM05D007551 ORTHO05D009424 1.6e-51 208.8 165 64.8
CAN.G652.9 Capsicum annuum HOM05D007551 ORTHO05D009424 2.7e-51 208.0 251 49.4
Sc07g0008330 Simmondsia chinensis HOM05D007551 ORTHO05D009424 3.0e-50 204.5 187 54.5
Nn6g33703 Nelumbo nucifera HOM05D007551 ORTHO05D009424 3.9e-50 204.1 191 57.6
Nitab4.5_0002667g0100 Nicotiana tabacum HOM05D007551 ORTHO05D009424 3.9e-50 204.1 249 47.8
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 5.1e-50 203.8 254 46.5
PGR042G1889 Punica granatum HOM05D007551 ORTHO05D009424 6.7e-50 203.4 231 48.9
Cpa.g.c44844 Carica papaya HOM05D007551 ORTHO05D009424 1.1e-49 202.6 217 53.5
MELO3C016242.2 Cucumis melo HOM05D007551 ORTHO05D009424 1.1e-49 202.6 246 49.2
ClCG07G011220 Citrullus lanatus HOM05D007551 ORTHO05D009424 1.9e-49 201.8 246 48.0
Sed0007434 Sechium edule HOM05D007551 ORTHO05D009424 3.3e-49 201.1 244 50.4
Sed0011000 Sechium edule HOM05D007551 ORTHO05D009424 4.3e-49 200.7 246 48.0
Nn1g00676 Nelumbo nucifera HOM05D007551 ORTHO05D009424 1.3e-48 199.1 191 57.6
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 1.6e-48 198.7 248 48.4
Solyc11g005940.3 Solanum lycopersicum HOM05D007551 ORTHO05D009424 4.8e-48 197.2 251 47.0
Nitab4.5_0000856g0020 Nicotiana tabacum HOM05D007551 ORTHO05D009424 6.3e-48 196.8 249 47.0
Peaxi162Scf00619g00022 Petunia axillaris HOM05D007551 ORTHO05D009424 1.1e-47 196.1 248 47.6
PGSC0003DMG402028683 Solanum tuberosum HOM05D007551 ORTHO05D009424 1.4e-47 195.7 251 47.8
Sopen11g001880 Solanum pennellii HOM05D007551 ORTHO05D009424 5.3e-47 193.7 249 46.6
CsaV3_4G007030 Cucumis sativus L. HOM05D007551 ORTHO05D009424 2.6e-46 191.4 242 47.9
Lsat_1_v5_gn_6_75081 Lactuca sativa HOM05D007551 ORTHO05D009424 1.0e-45 189.5 246 45.1
RcHm_v2.0_Chr4g0405931 Rosa chinensis HOM05D007551 ORTHO05D009424 5.0e-45 187.2 250 44.4
FvH4_4g10440 Fragaria vesca HOM05D007551 ORTHO05D009424 1.1e-44 186.0 250 45.6
FvH4_4g10410 Fragaria vesca HOM05D007551 ORTHO05D009424 4.2e-44 184.1 250 45.2
VMungo0251G2062 Vigna mungo HOM05D007551 ORTHO05D009424 4.6e-43 180.6 259 44.0
Eucgr.E01036 Eucalyptus grandis HOM05D007551 ORTHO05D009424 3.9e-42 177.6 266 41.4
Migut.E01387 Erythranthe guttata HOM05D007551 ORTHO05D009424 5.1e-42 177.2 239 45.2
PSO210G4217 Papaver somniferum HOM05D007551 ORTHO05D009424 1.1e-41 176.0 253 43.1
Lalb_Chr09g0334421 Lupinus albus HOM05D007551 ORTHO05D009424 1.9e-41 175.3 191 49.7
Aqoxy2G03897 Aquilegia oxysepala HOM05D007551 ORTHO05D009424 5.7e-41 173.7 179 52.0
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 5.7e-41 173.7 251 44.6
Cc00_g20060 Coffea canephora HOM05D007551 ORTHO05D009424 1.3e-40 172.6 235 46.4
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 2.8e-40 171.4 250 43.6
MSTRG.1750 Avicennia marina HOM05D007551 ORTHO05D009424 1.1e-39 169.5 258 43.0
PSO210G5788 Papaver somniferum HOM05D007551 ORTHO05D009424 5.3e-39 167.2 195 48.7
Glyma.16G058700 Glycine max HOM05D007551 ORTHO05D009424 6.9e-39 166.8 254 42.5
Aa31LG6G2050 Aethionema arabicum HOM05D007551 ORTHO05D009424 9.0e-39 166.4 193 47.7
SalBow1G3247 Salvia bowleyana HOM05D007551 ORTHO05D009424 9.0e-39 166.4 247 42.9
SalBow8G4006 Salvia bowleyana HOM05D007551 ORTHO05D009424 9.0e-39 166.4 247 42.9
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 1.2e-38 166.0 250 43.2
Oeu029773.2 Olea europaea HOM05D007551 ORTHO05D009424 1.2e-38 166.0 267 44.9
Phvul.003G277400 Phaseolus vulgaris HOM05D007551 ORTHO05D009424 2.6e-38 164.9 253 41.9
Sp7g18060 Schrenkiella parvula HOM05D007551 ORTHO05D009424 3.4e-38 164.5 252 42.5
Lj4g0019089 Lotus japonicus HOM05D007551 ORTHO05D009424 1.3e-37 162.5 250 43.2
Oeu040609.1 Olea europaea HOM05D007551 ORTHO05D009424 1.3e-37 162.5 260 41.2
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 2.9e-37 161.4 190 48.4
BcaB03g11619 Brassica carinata HOM05D007551 ORTHO05D009424 3.8e-37 161.0 193 48.2
Psat4g109680 Pisum sativum HOM05D007551 ORTHO05D009424 4.2e-36 157.5 246 43.1
TPR.G16813 Trifolium pratense HOM05D007551 ORTHO05D009424 4.2e-36 157.5 211 44.5
SGA_v2.0_scaffold121G33050 Striga asiatica HOM05D007551 ORTHO05D009424 1.1e-33 149.4 259 39.4
ECA240G1023 Erigeron canadensis HOM05D000046 ORTHO05D000457 5.7e-33 147.1 163 47.2
Medtr8g071970 Medicago truncatula HOM05D007551 ORTHO05D009424 9.7e-33 146.4 246 40.7
AUR62044750 Chenopodium quinoa HOM05D007551 ORTHO05D009424 6.3e-32 143.7 250 38.0
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 6.9e-31 140.2 188 41.5
FAN04G0939 Fragaria x ananassa HOM05D007551 ORTHO05D009424 3.8e-29 134.4 246 35.0
CARHR226230 Cardamine hirsuta HOM05D007551 ORTHO05D009424 3.2e-28 131.3 221 39.4
CSS0008559 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 1.3e-21 109.4 87 62.1
Cpa.g.sc3.432 Carica papaya HOM05D007551 ORTHO05D009424 2.2e-21 108.6 80 68.8
CSS0048505 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 3.8e-21 107.8 87 62.1
HPP92_013860 Vanilla planifolia HOM05D007551 ORTHO05D009424 6.7e-18 97.1 192 32.8
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 2.2e-16 92.0 154 37.7
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 1.8e-15 89.0 154 36.4
ATR0626G221 Amborella trichopoda HOM05D007551 ORTHO05D009424 2.7e-14 85.1 145 37.9
Lj8C372G5 Lonicera japonica HOM05D007551 ORTHO05D009424 5.9e-14 84.0 76 57.9
Lalb_Chr05g0229381 Lupinus albus HOM05D007551 ORTHO05D009424 3.2e-12 78.2 103 46.6
Ca_22472_v3 Cicer arietinum L. HOM05D007551 ORTHO05D009424 4.7e-11 74.3 93 47.3
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 2.3e-10 72.0 85 48.2
CARHR058230 Cardamine hirsuta HOM05D007291 ORTHO05D009038 2.0e-06 58.9 198 28.3
SEGI_04297 Sequoiadendron giganteum HOM05D007212 ORTHO05D009094 4.5e-06 57.8 152 29.6
FvH4_2g40380 Fragaria vesca HOM05D007639 ORTHO05D009509 5.9e-06 57.4 195 28.2


User provided reference genes

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