Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0068300 Salix brachista HOM05D014240 ORTHO05D016630 3.4e-46 188.0 93 100.0
Sabra03G0068100 Salix brachista HOM05D000184 ORTHO05D000032 8.1e-32 140.2 75 92.0
Potri.003G100100 Populus trichocarpa HOM05D000184 ORTHO05D000032 1.5e-30 136.0 75 89.3
Sabra01G0102900 Salix brachista HOM05D000184 ORTHO05D000032 8.1e-24 113.6 86 64.0
Potri.001G133400 Populus trichocarpa HOM05D000184 ORTHO05D000032 1.1e-23 113.2 74 75.7
arahy.Tifrunner.gnm1.ann1.7LC16L Arachis hypogaea HOM05D014240 ORTHO05D016630 2.1e-11 72.4 79 49.4
DCAR_004252 Daucus carota HOM05D000184 ORTHO05D000032 2.1e-11 72.4 80 51.2
DCAR_008191 Daucus carota HOM05D000184 ORTHO05D000032 3.5e-11 71.6 79 50.6
Cfa012563 Carpinus fangiana HOM05D000184 ORTHO05D000032 7.8e-11 70.5 74 52.7
Haze_08099 Corylus avellana HOM05D000184 ORTHO05D000032 7.8e-11 70.5 74 54.1
Atru.chr6.1581 Acer truncatum HOM05D000184 ORTHO05D000032 3.0e-10 68.6 76 55.3
QL12p000507 Quercus lobata HOM05D000184 ORTHO05D000032 5.1e-10 67.8 74 51.4
Lj7A133G23 Lonicera japonica HOM05D000184 ORTHO05D000032 1.9e-09 65.9 75 54.7
HanXRQChr17g0537661 Helianthus annuus HOM05D000184 ORTHO05D000032 7.3e-09 63.9 58 60.3
Thecc.03G314700 Theobroma cacao HOM05D000184 ORTHO05D000032 9.6e-09 63.5 69 53.6
Ciclev10002089m.g Citrus clementina HOM05D000184 ORTHO05D000032 1.3e-08 63.2 77 48.1
VMungo1215G2615 Vigna mungo HOM05D000184 ORTHO05D000032 1.6e-08 62.8 75 46.7
CiPaw.12G070500 Carya illinoinensis HOM05D000184 ORTHO05D000032 2.1e-08 62.4 69 50.7
ECA246G3975 Erigeron canadensis HOM05D000184 ORTHO05D000032 3.6e-08 61.6 57 59.6
Lsat_1_v5_gn_3_20841 Lactuca sativa HOM05D000184 ORTHO05D000032 3.6e-08 61.6 56 60.7
COL.COLO4_16881 Corchorus olitorius HOM05D001577 ORTHO05D003311 1.4e-07 59.7 67 49.3
Duzib084G0428 Durio zibethinus HOM05D000184 ORTHO05D000032 1.8e-07 59.3 68 48.5
GSVIVG01022645001 Vitis vinifera HOM05D000184 ORTHO05D000032 1.8e-07 59.3 69 50.7
Glyma.01G009600 Glycine max HOM05D000184 ORTHO05D000032 2.4e-07 58.9 75 45.3
vmacro00073 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 2.4e-07 58.9 73 49.3
vmacro23307 Vaccinium macrocarpon HOM05D000184 ORTHO05D000032 2.4e-07 58.9 73 49.3
PGSC0003DMG400020455 Solanum tuberosum HOM05D000184 ORTHO05D000032 3.1e-07 58.5 70 50.0
arahy.Tifrunner.gnm1.ann1.T0KD2M Arachis hypogaea HOM05D014240 ORTHO05D016630 6.9e-07 57.4 78 38.5
ClCG07G002310 Citrullus lanatus HOM05D000184 ORTHO05D000032 6.9e-07 57.4 80 38.8
Cc08_g04300 Coffea canephora HOM05D000184 ORTHO05D000032 6.9e-07 57.4 59 54.2
Phvul.002G132500 Phaseolus vulgaris HOM05D000184 ORTHO05D000032 6.9e-07 57.4 75 44.0
Dinv15840 Davidia involucrata HOM05D000184 ORTHO05D000032 1.2e-06 56.6 70 50.0
TWI60G1306 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 1.2e-06 56.6 51 62.7
Actinidia27269 Actinidia chinensis HOM05D000184 ORTHO05D000032 1.5e-06 56.2 61 50.8
FvH4_5g23660 Fragaria vesca HOM05D000184 ORTHO05D000032 1.5e-06 56.2 74 41.9
FAN04G1742 Fragaria x ananassa HOM05D000184 ORTHO05D000032 1.5e-06 56.2 74 41.9
FAN13G3333 Fragaria x ananassa HOM05D000184 ORTHO05D000032 1.5e-06 56.2 74 41.9
FAN18G1415 Fragaria x ananassa HOM05D000184 ORTHO05D000032 1.5e-06 56.2 74 41.9
FAN18G1854 Fragaria x ananassa HOM05D000184 ORTHO05D000032 1.5e-06 56.2 74 41.9
Rhsim11G0027000 Rhododendron simsii HOM05D000184 ORTHO05D000032 2.0e-06 55.8 59 50.8
Actinidia01272 Actinidia chinensis HOM05D000184 ORTHO05D000032 2.6e-06 55.5 61 49.2
CSS0006111 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 2.6e-06 55.5 72 48.6
FAN13G0376 Fragaria x ananassa HOM05D000184 ORTHO05D000032 2.6e-06 55.5 74 41.9
Lj2g0015947 Lotus japonicus HOM05D000184 ORTHO05D000032 2.6e-06 55.5 85 38.8
MD00G1000500 Malus domestica HOM05D000184 ORTHO05D000032 2.6e-06 55.5 74 44.6
Medtr5g027440 Medicago truncatula HOM05D000184 ORTHO05D000032 4.4e-06 54.7 74 45.9
RcHm_v2.0_Chr7g0212961 Rosa chinensis HOM05D000184 ORTHO05D000032 4.4e-06 54.7 74 41.9
FAN08G2667 Fragaria x ananassa HOM05D000184 ORTHO05D000032 5.8e-06 54.3 74 40.5
Glyma.09G211400 Glycine max HOM05D000184 ORTHO05D000032 5.8e-06 54.3 75 44.0
Hma1.2p1_0979F.1_g243570 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 5.8e-06 54.3 53 56.6
Ca_25145_v3 Cicer arietinum L. HOM05D000184 ORTHO05D000032 7.6e-06 53.9 60 48.3
Gohir.D08G172800 Gossypium hirsutum HOM05D000184 ORTHO05D000032 9.9e-06 53.5 69 49.3
Gorai.004G180000 Gossypium raimondii HOM05D000184 ORTHO05D000032 9.9e-06 53.5 69 49.3
Prupe.5G023700 Prunus persica HOM05D000184 ORTHO05D000032 9.9e-06 53.5 54 53.7


User provided reference genes

Program Settings