Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0064200 Salix brachista HOM05D005023 ORTHO05D006009 1.7e-202 709.1 354 100.0
Potri.003G095200 Populus trichocarpa HOM05D005023 ORTHO05D006009 5.4e-129 464.9 348 73.0
Sabra01G0107600 Salix brachista HOM05D005023 ORTHO05D006009 5.9e-99 365.2 383 56.7
Manes.02G223400 Manihot esculenta HOM05D005023 ORTHO05D006009 9.4e-81 304.7 337 51.0
TWI60G0688 Tripterygium wilfordii HOM05D005023 ORTHO05D006009 4.4e-78 295.8 234 59.4
GSVIVG01013101001 Vitis vinifera HOM05D005023 ORTHO05D006009 5.9e-75 285.4 349 46.4
QL12p004398 Quercus lobata HOM05D005023 ORTHO05D006009 7.2e-73 278.5 230 60.0
Dinv28986 Davidia involucrata HOM05D005023 ORTHO05D006009 1.0e-71 274.6 221 57.0
Atru.chr12.846 Acer truncatum HOM05D005023 ORTHO05D006009 1.8e-71 273.9 252 54.4
Ciclev10016033m.g Citrus clementina HOM05D005023 ORTHO05D006009 5.2e-71 272.3 231 58.4
Cfa012488 Carpinus fangiana HOM05D005023 ORTHO05D006009 1.5e-70 270.8 349 45.0
Prupe.5G030700 Prunus persica HOM05D005023 ORTHO05D006009 6.3e-69 265.4 350 42.9
CiPaw.11G096900 Carya illinoinensis HOM05D005023 ORTHO05D006009 1.4e-68 264.2 218 58.3
RcHm_v2.0_Chr7g0211361 Rosa chinensis HOM05D005023 ORTHO05D006009 1.8e-68 263.8 232 56.5
CSS0008599 Camellia sinensis var. sinensis HOM05D005023 ORTHO05D006009 4.5e-67 259.2 220 55.9
Aqoxy1G01584 Aquilegia oxysepala HOM05D005023 ORTHO05D006009 7.7e-67 258.5 232 52.6
Cpa.g.sc90.15 Carica papaya HOM05D005023 ORTHO05D006009 5.0e-66 255.8 232 54.3
Duzib084G0965 Durio zibethinus HOM05D005023 ORTHO05D006009 6.5e-66 255.4 231 54.1
Thecc.03G307500 Theobroma cacao HOM05D005023 ORTHO05D006009 6.5e-66 255.4 231 54.5
COL.COLO4_16967 Corchorus olitorius HOM05D005023 ORTHO05D006009 1.9e-65 253.8 231 54.1
FvH4_5g22760 Fragaria vesca HOM05D005023 ORTHO05D006009 7.2e-65 251.9 342 43.9
FAN18G3597 Fragaria x ananassa HOM05D005023 ORTHO05D006009 7.2e-65 251.9 342 43.9
FAN08G0704 Fragaria x ananassa HOM05D005023 ORTHO05D006009 9.4e-65 251.5 346 43.4
FAN13G2198 Fragaria x ananassa HOM05D005023 ORTHO05D006009 2.1e-64 250.4 332 44.0
FAN13G2978 Fragaria x ananassa HOM05D005023 ORTHO05D006009 2.1e-64 250.4 332 44.0
Actinidia09175 Actinidia chinensis HOM05D005023 ORTHO05D006009 2.7e-64 250.0 222 54.5
Lj6g0028231 Lotus japonicus HOM05D005023 ORTHO05D006009 2.7e-64 250.0 246 52.8
FAN18G4268 Fragaria x ananassa HOM05D005023 ORTHO05D006009 3.6e-64 249.6 342 43.6
PSO170G6706 Papaver somniferum HOM05D005023 ORTHO05D006009 4.7e-64 249.2 226 55.8
MD06G1038100 Malus domestica HOM05D005023 ORTHO05D006009 3.0e-63 246.5 235 49.8
Hma1.2p1_2161F.1_g315620 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 1.2e-62 244.6 224 53.1
TPR.G14159 Trifolium pratense HOM05D005023 ORTHO05D006009 1.2e-62 244.6 244 52.5
Actinidia25987 Actinidia chinensis HOM05D005023 ORTHO05D006009 2.0e-62 243.8 220 52.3
PGR042G2438 Punica granatum HOM05D005023 ORTHO05D006009 2.0e-62 243.8 229 50.7
Psat4g122280 Pisum sativum HOM05D005023 ORTHO05D006009 2.6e-62 243.4 232 52.6
PSO782G3892 Papaver somniferum HOM05D005023 ORTHO05D006009 1.3e-61 241.1 224 55.4
Lalb_Chr25g0286701 Lupinus albus HOM05D005023 ORTHO05D006009 2.2e-61 240.4 225 54.2
PSO302G0152 Papaver somniferum HOM05D005023 ORTHO05D006009 8.3e-61 238.4 222 54.5
vmacro00304 Vaccinium macrocarpon HOM05D005023 ORTHO05D006009 1.8e-60 237.3 268 44.4
Medtr8g066330 Medicago truncatula HOM05D005023 ORTHO05D006009 4.1e-60 236.1 242 52.5
Glyma.06G013600 Glycine max HOM05D005023 ORTHO05D006009 1.2e-59 234.6 215 55.3
Rhsim07G0130800 Rhododendron simsii HOM05D005023 ORTHO05D006009 4.5e-59 232.6 222 50.5
Ca_22661_v3 Cicer arietinum L. HOM05D005023 ORTHO05D006009 1.3e-58 231.1 244 49.6
Eucgr.E00250 Eucalyptus grandis HOM05D005023 ORTHO05D006009 1.7e-58 230.7 230 49.1
PGSC0003DMG400014810 Solanum tuberosum HOM05D005023 ORTHO05D006009 2.3e-58 230.3 235 49.4
MBI02_g28332_MAGBIO Magnolia biondii HOM05D005023 ORTHO05D006009 3.8e-58 229.6 228 51.3
Gohir.A12G206900 Gossypium hirsutum HOM05D005023 ORTHO05D006009 1.5e-57 227.6 224 51.3
Haze_08177 Corylus avellana HOM05D005023 ORTHO05D006009 1.9e-57 227.3 179 60.9
Phvul.009G009200 Phaseolus vulgaris HOM05D005023 ORTHO05D006009 1.9e-57 227.3 234 50.4
arahy.Tifrunner.gnm1.ann1.J93PEP Arachis hypogaea HOM05D005023 ORTHO05D006009 2.5e-57 226.9 233 51.5
Solyc08g076570.3 Solanum lycopersicum HOM05D005023 ORTHO05D006009 3.3e-57 226.5 235 48.9
Gorai.008G224900 Gossypium raimondii HOM05D005023 ORTHO05D006009 4.2e-57 226.1 224 50.9
DCAR_031128 Daucus carota HOM05D005023 ORTHO05D006009 5.5e-57 225.7 216 48.1
Gohir.D12G209350 Gossypium hirsutum HOM05D005023 ORTHO05D006009 7.2e-57 225.3 224 50.9
CANSAT54G0648 Cannabis sativa HOM05D005023 ORTHO05D006009 9.5e-57 224.9 235 47.7
arahy.Tifrunner.gnm1.ann1.6CH5L4 Arachis hypogaea HOM05D005023 ORTHO05D006009 1.6e-56 224.2 233 50.6
Sopen08g025130 Solanum pennellii HOM05D005023 ORTHO05D006009 1.6e-56 224.2 235 48.9
arahy.Tifrunner.gnm1.ann1.NK2KWA Arachis hypogaea HOM05D005023 ORTHO05D006009 2.1e-56 223.8 233 50.6
EL10Ac8g19220 Beta vulgaris HOM05D005023 ORTHO05D006009 4.7e-56 222.6 198 52.0
AUR62033976 Chenopodium quinoa HOM05D005023 ORTHO05D006009 6.1e-56 222.2 213 48.4
Sed0002054 Sechium edule HOM05D005023 ORTHO05D006009 1.8e-55 220.7 217 51.2
Glyma.04G013700 Glycine max HOM05D005023 ORTHO05D006009 4.0e-55 219.5 211 53.1
ClCG04G001320 Citrullus lanatus HOM05D005023 ORTHO05D006009 1.2e-54 218.0 217 51.6
CAN.G298.60 Capsicum annuum HOM05D005023 ORTHO05D006009 2.0e-54 217.2 235 48.5
CAN.G298.61 Capsicum annuum HOM05D005023 ORTHO05D006009 2.0e-54 217.2 235 48.5
CAN.G726.32 Capsicum annuum HOM05D005023 ORTHO05D006009 2.0e-54 217.2 235 48.5
Lj2A234G45 Lonicera japonica HOM05D005023 ORTHO05D006009 2.0e-54 217.2 252 45.2
Ah.12g065340 Amaranthus hybridus HOM05D005023 ORTHO05D006009 2.6e-54 216.9 198 51.0
MSTRG.1995 Avicennia marina HOM05D005023 ORTHO05D006009 4.4e-54 216.1 202 52.0
Lsat_1_v5_gn_6_80180 Lactuca sativa HOM05D005023 ORTHO05D006009 7.5e-54 215.3 237 44.3
Peaxi162Scf00170g00918 Petunia axillaris HOM05D005023 ORTHO05D006009 2.2e-53 213.8 236 47.5
PSO063G5178 Papaver somniferum HOM05D005023 ORTHO05D006009 4.9e-53 212.6 179 58.1
Psat4g122680 Pisum sativum HOM05D005023 ORTHO05D006009 6.3e-53 212.2 189 55.0
HanXRQChr03g0083581 Helianthus annuus HOM05D005023 ORTHO05D006009 2.4e-52 210.3 223 44.4
Migut.E00780 Erythranthe guttata HOM05D005023 ORTHO05D006009 3.1e-52 209.9 226 47.3
Nn7g38116 Nelumbo nucifera HOM05D005023 ORTHO05D006009 4.1e-52 209.5 347 38.0
Cc08_g03230 Coffea canephora HOM05D005023 ORTHO05D006009 9.2e-52 208.4 219 50.2
FAN04G1126 Fragaria x ananassa HOM05D005023 ORTHO05D006009 4.5e-51 206.1 177 55.4
Nitab4.5_0002380g0110 Nicotiana tabacum HOM05D005023 ORTHO05D006009 5.9e-51 205.7 222 47.7
Hund11209 Selenicereus undatus HOM05D005023 ORTHO05D006009 6.6e-50 202.2 199 51.3
SGA_v2.0_scaffold6G03150 Striga asiatica HOM05D005023 ORTHO05D006009 6.6e-50 202.2 338 39.9
CsaV3_1G033210 Cucumis sativus L. HOM05D000021 ORTHO05D000010 8.6e-50 201.8 302 39.7
Nitab4.5_0004669g0010 Nicotiana tabacum HOM05D005023 ORTHO05D006009 1.2e-48 198.0 222 46.4
Nitab4.5_0004839g0010 Nicotiana tabacum HOM05D005023 ORTHO05D006009 1.6e-48 197.6 220 45.9
ECA240G3323 Erigeron canadensis HOM05D005023 ORTHO05D006009 2.1e-48 197.2 220 44.5
SHI20240 Sapria himalayana HOM05D000452 ORTHO05D000647 2.8e-48 196.8 267 43.8
Nitab4.5_0000353g0050 Nicotiana tabacum HOM05D005023 ORTHO05D006009 3.6e-48 196.4 222 45.9
SalBow6G6031 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.2e-46 191.4 217 46.1
SalBow6G4088 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.5e-46 191.0 220 46.8
CARHR174600 Cardamine hirsuta HOM05D005023 ORTHO05D006009 2.0e-46 190.7 244 46.3
SalBow6G6255 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.6e-46 190.3 217 46.5
SalBow8G0269 Salvia bowleyana HOM05D005023 ORTHO05D006009 7.5e-46 188.7 224 45.1
SalBow6G3389 Salvia bowleyana HOM05D005023 ORTHO05D006009 9.8e-46 188.3 217 46.1
SalBow6G2872 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.3e-45 188.0 217 46.1
SalBow6G3524 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.3e-45 188.0 217 46.1
SalBow6G3383 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.2e-45 187.2 217 45.6
SalBow6G4332 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.2e-45 187.2 216 46.3
SalBow6G6227 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.2e-45 187.2 217 45.6
Carub.0008s0106 Capsella rubella HOM05D005023 ORTHO05D006009 4.9e-45 186.0 218 49.1
Thhalv10000976m.g Eutrema salsugineum HOM05D005023 ORTHO05D006009 4.9e-45 186.0 222 49.1
SalBow6G1717 Salvia bowleyana HOM05D005023 ORTHO05D006009 4.9e-45 186.0 217 45.6
AL8G11450 Arabidopsis lyrata HOM05D005023 ORTHO05D006009 6.4e-45 185.7 218 49.5
SalBow6G3781 Salvia bowleyana HOM05D005023 ORTHO05D006009 8.3e-45 185.3 237 43.5
Os12g0596900 Oryza sativa ssp. japonica HOM05D005023 ORTHO05D006009 1.1e-44 184.9 199 47.7
SalBow6G6846 Salvia bowleyana HOM05D005023 ORTHO05D006009 4.1e-44 183.0 217 45.6
AT5G46850 Arabidopsis thaliana HOM05D005023 ORTHO05D006009 5.4e-44 182.6 215 48.4
CDE02G4581 Ceratophyllum demersum HOM05D005023 ORTHO05D006009 5.4e-44 182.6 199 49.2
Aa31sc182G50 Aethionema arabicum HOM05D005023 ORTHO05D006009 7.0e-44 182.2 200 49.5
arahy.Tifrunner.gnm1.ann1.GAHP45 Arachis hypogaea HOM05D005023 ORTHO05D006009 1.6e-43 181.0 232 44.8
BcaC06g31439 Brassica carinata HOM05D005023 ORTHO05D006009 2.7e-43 180.3 214 47.2
BcaC06g34337 Brassica carinata HOM05D005023 ORTHO05D006009 7.8e-43 178.7 216 46.3
A06p45570 Brassica napus HOM05D005023 ORTHO05D006009 7.8e-43 178.7 213 46.5
C07p30210 Brassica napus HOM05D005023 ORTHO05D006009 7.8e-43 178.7 216 46.3
BraA06t27429Z Brassica rapa HOM05D005023 ORTHO05D006009 7.8e-43 178.7 213 46.5
Sp2g11650 Schrenkiella parvula HOM05D005023 ORTHO05D006009 1.0e-42 178.3 216 47.7
BolC7t43557H Brassica oleracea HOM05D005023 ORTHO05D006009 1.3e-42 177.9 216 46.3
TPR.G3350 Trifolium pratense HOM05D005023 ORTHO05D006009 6.6e-42 175.6 141 61.0
HPP92_014897 Vanilla planifolia HOM05D005023 ORTHO05D006009 2.5e-41 173.7 201 45.3
THA.LOC104806696 Tarenaya hassleriana HOM05D005023 ORTHO05D006009 1.2e-40 171.4 205 47.3
HPP92_014902 Vanilla planifolia HOM05D005023 ORTHO05D006009 2.8e-40 170.2 201 44.8
MELO3C033076.2 Cucumis melo HOM05D005023 ORTHO05D006009 1.8e-39 167.5 217 44.2
ATR0580G166 Amborella trichopoda HOM05D005237 ORTHO05D006189 3.1e-39 166.8 189 43.9
Zm00001eb030880 Zea mays HOM05D005023 ORTHO05D006009 1.2e-38 164.9 219 40.6
Hma1.2p1_2161F.1_g315630 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 9.8e-38 161.8 133 59.4
Hma1.2p1_1594F.1_g292650 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 2.2e-37 160.6 137 58.4
Sc01g0007280 Simmondsia chinensis HOM05D005023 ORTHO05D006009 1.1e-36 158.3 205 42.4
unitig_21.g20893 Utricularia gibba HOM05D005023 ORTHO05D004745 7.3e-33 145.6 175 42.3
Hma1.2p1_0572F.1_g181170 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 6.8e-31 139.0 126 54.8
SalBow6G0983 Salvia bowleyana HOM05D005023 ORTHO05D006009 9.9e-30 135.2 133 51.1
SalBow6G5471 Salvia bowleyana HOM05D005023 ORTHO05D006009 9.9e-30 135.2 153 46.4
SalBow6G0969 Salvia bowleyana HOM05D005023 ORTHO05D006009 4.9e-29 132.9 133 50.4
SalBow6G6268 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.4e-28 131.3 149 45.6
Actinidia09177 Actinidia chinensis HOM05D005023 ORTHO05D006009 1.9e-28 131.0 221 35.7
Solyc08g076550.3 Solanum lycopersicum HOM05D005023 ORTHO05D006009 2.4e-28 130.6 141 46.8
SalBow6G1311 Salvia bowleyana HOM05D005023 ORTHO05D006009 3.2e-28 130.2 137 48.9
SalBow6G0951 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.9e-25 120.9 139 45.3
Mapoly0088s0063 Marchantia polymorpha HOM05D005023 ORTHO05D006009 1.4e-23 114.8 198 33.8
Pp3c13_7870 Physcomitrium patens HOM05D005023 ORTHO05D006009 4.6e-19 99.8 215 30.2
SMO358G0075 Selaginella moellendorffii HOM05D005023 ORTHO05D006009 6.6e-18 95.9 198 31.8
TAR375G0008 Trochodendron aralioides HOM05D005023 ORTHO05D006009 7.6e-14 82.4 87 49.4
MELO3C011047.2 Cucumis melo HOM05D005023 ORTHO05D006009 2.2e-13 80.9 76 51.3
CSS0036970 Camellia sinensis var. sinensis HOM05D005023 ORTHO05D006009 6.4e-13 79.3 89 39.3
AagrBONN_evm.TU.Sc2ySwM_344.1294 Anthoceros agrestis HOM05D005023 ORTHO05D006009 5.6e-09 66.2 150 31.3
SalBow6G7173 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.6e-08 64.7 81 42.0
SEGI_33873 Sequoiadendron giganteum HOM05D005023 ORTHO05D006009 2.1e-08 64.3 64 43.8
SalBow6G0459 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.1e-07 62.0 78 39.7


User provided reference genes

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