Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 2.1e-67 258.8 126 100.0
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 4.1e-63 244.6 126 94.4
Potri.001G142700 Populus trichocarpa HOM05D006772 ORTHO05D008367 4.0e-58 228.0 127 89.0
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 1.3e-56 223.0 127 85.8
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 3.9e-45 184.9 128 70.3
COL.COLO4_17058 Corchorus olitorius HOM05D006772 ORTHO05D008367 8.6e-45 183.7 125 74.4
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 1.1e-44 183.3 126 70.6
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 1.1e-44 183.3 126 70.6
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 1.5e-44 183.0 124 73.4
Duzib205G2036 Durio zibethinus HOM05D006772 ORTHO05D008367 2.5e-44 182.2 124 73.4
Cc08_g02570 Coffea canephora HOM05D006772 ORTHO05D008367 4.3e-44 181.4 127 70.9
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 4.3e-44 181.4 126 69.8
QL12p005804 Quercus lobata HOM05D006772 ORTHO05D008367 5.6e-44 181.0 125 72.8
Haze_08246 Corylus avellana HOM05D006772 ORTHO05D008367 1.2e-43 179.9 128 71.1
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 1.6e-43 179.5 126 69.8
QL12p005837 Quercus lobata HOM05D006772 ORTHO05D008367 1.6e-43 179.5 125 72.0
Prupe.5G037100 Prunus persica HOM05D006772 ORTHO05D008367 3.6e-43 178.3 126 71.4
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 1.8e-42 176.0 131 71.8
MD06G1033600 Malus domestica HOM05D006772 ORTHO05D008367 5.2e-42 174.5 128 70.3
Cfa012424 Carpinus fangiana HOM05D006772 ORTHO05D008367 8.9e-42 173.7 128 68.8
Peaxi162Scf00460g00052 Petunia axillaris HOM05D006772 ORTHO05D008367 1.2e-41 173.3 128 70.3
TAR375G0733 Trochodendron aralioides HOM05D006772 ORTHO05D008367 2.0e-41 172.6 126 69.0
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 7.5e-41 170.6 119 70.6
Hma1.2p1_0991F.1_g245070 Hydrangea macrophylla HOM05D006772 ORTHO05D008367 2.2e-40 169.1 125 71.2
MD16G1275100 Malus domestica HOM05D006772 ORTHO05D008367 2.2e-40 169.1 128 67.2
Gorai.003G181100 Gossypium raimondii HOM05D006772 ORTHO05D008367 1.1e-39 166.8 126 68.3
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 1.1e-39 166.8 126 68.3
Gohir.D03G170700 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.9e-39 166.0 126 68.3
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 2.4e-39 165.6 134 65.7
Rhsim07G0126400 Rhododendron simsii HOM05D006772 ORTHO05D008367 3.2e-39 165.2 124 63.7
PGSC0003DMG400043394 Solanum tuberosum HOM05D006772 ORTHO05D008367 4.1e-39 164.9 126 67.5
Gohir.A03G001600 Gossypium hirsutum HOM05D006772 ORTHO05D008367 7.1e-39 164.1 126 69.0
Nitab4.5_0001666g0010 Nicotiana tabacum HOM05D006772 ORTHO05D008367 1.2e-38 163.3 126 65.1
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 1.2e-38 163.3 126 67.5
CSS0038918 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 2.7e-38 162.2 124 66.1
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 3.5e-38 161.8 126 66.7
Aqoxy3G02398 Aquilegia oxysepala HOM05D006772 ORTHO05D008367 6.0e-38 161.0 125 66.4
CSS0016213 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 7.8e-38 160.6 124 65.3
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 1.7e-37 159.5 125 63.2
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 1.7e-37 159.5 125 63.2
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 1.7e-37 159.5 127 65.4
Nn6g33607 Nelumbo nucifera HOM05D006772 ORTHO05D008367 3.0e-37 158.7 126 65.1
Sc01g0007510 Simmondsia chinensis HOM05D006772 ORTHO05D008367 5.1e-37 157.9 131 64.1
TWI15G0236 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 1.5e-36 156.4 125 66.4
Eucgr.D02187 Eucalyptus grandis HOM05D006772 ORTHO05D008367 2.5e-36 155.6 124 64.5
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 2.5e-36 155.6 133 61.7
Nitab4.5_0000804g0080 Nicotiana tabacum HOM05D006772 ORTHO05D008367 3.3e-36 155.2 126 63.5
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 1.6e-35 152.9 132 63.6
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 2.1e-35 152.5 135 60.7
Psat2g173920 Pisum sativum HOM05D006772 ORTHO05D008367 2.8e-35 152.1 132 58.3
Glyma.17G155300 Glycine max HOM05D006772 ORTHO05D008367 4.7e-35 151.4 133 57.1
Lsat_1_v5_gn_6_78680 Lactuca sativa HOM05D006772 ORTHO05D008367 1.1e-34 150.2 134 58.2
Lalb_Chr05g0213971 Lupinus albus HOM05D006772 ORTHO05D008367 1.1e-34 150.2 129 58.1
Gohir.A12G208800 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.4e-34 149.8 124 65.3
Gorai.008G227000 Gossypium raimondii HOM05D006772 ORTHO05D008367 1.4e-34 149.8 124 65.3
Lj2g0019736 Lotus japonicus HOM05D006772 ORTHO05D008367 2.3e-34 149.1 135 57.8
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 2.3e-34 149.1 128 61.7
Gohir.D12G211500 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.1e-34 148.7 124 64.5
TWI60G0285 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 3.1e-34 148.7 126 63.5
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 5.2e-34 147.9 133 59.4
Gohir.A11G030300 Gossypium hirsutum HOM05D006772 ORTHO05D008367 6.8e-34 147.5 129 59.7
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 1.2e-33 146.7 126 58.7
Lalb_Chr16g0379141 Lupinus albus HOM05D006772 ORTHO05D008367 1.2e-33 146.7 130 57.7
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 2.6e-33 145.6 128 57.8
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 9.9e-33 143.7 131 58.8
Ca_24649_v3 Cicer arietinum L. HOM05D006772 ORTHO05D008367 1.3e-32 143.3 129 58.9
MELO3C003403.2 Cucumis melo HOM05D006772 ORTHO05D008367 1.4e-31 139.8 134 57.5
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 1.9e-31 139.4 125 61.6
Ah.12g054950 Amaranthus hybridus HOM05D006772 ORTHO05D008367 2.4e-31 139.0 117 59.0
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 2.4e-31 139.0 120 59.2
TPR.G7824 Trifolium pratense HOM05D006772 ORTHO05D008367 2.4e-31 139.0 126 60.3
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 5.4e-31 137.9 129 59.7
Sed0022952 Sechium edule HOM05D006772 ORTHO05D008367 7.1e-31 137.5 130 57.7
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 2.1e-30 136.0 131 57.3
Sed0027084 Sechium edule HOM05D006772 ORTHO05D008367 2.3e-29 132.5 131 56.5
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 3.0e-29 132.1 107 61.7
MBI02_g14426_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 5.1e-29 131.3 125 56.0
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 6.6e-29 131.0 129 53.5
CsaV3_3G049240 Cucumis sativus L. HOM05D006772 ORTHO05D008367 8.6e-29 130.6 136 53.7
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 4.3e-28 128.3 136 51.5
MBI05_g46462_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.6e-27 126.3 125 52.0
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 2.1e-27 125.9 137 49.6
Gohir.D11G028900 Gossypium hirsutum HOM05D006772 ORTHO05D008367 4.0e-26 121.7 102 60.8
CiPaw.11G092300 Carya illinoinensis HOM05D006772 ORTHO05D008367 5.2e-26 121.3 124 54.0
THA.LOC104807956 Tarenaya hassleriana HOM05D006772 ORTHO05D008367 8.9e-26 120.6 125 52.8
A05p10490 Brassica napus HOM05D006772 ORTHO05D008367 2.2e-24 115.9 131 49.6
BraA05t19987Z Brassica rapa HOM05D006772 ORTHO05D008367 2.2e-24 115.9 131 49.6
BcaB02g09453 Brassica carinata HOM05D006772 ORTHO05D008367 4.9e-24 114.8 131 48.9
BcaB02g09458 Brassica carinata HOM05D006772 ORTHO05D008367 4.9e-24 114.8 131 48.9
BcaB02g09462 Brassica carinata HOM05D006772 ORTHO05D008367 4.9e-24 114.8 131 48.9
BcaC02g11632 Brassica carinata HOM05D006772 ORTHO05D008367 4.9e-24 114.8 131 48.9
C04p12890 Brassica napus HOM05D006772 ORTHO05D008367 4.9e-24 114.8 131 48.9
BolC4t22934H Brassica oleracea HOM05D006772 ORTHO05D008367 4.9e-24 114.8 131 48.9
CARHR129440 Cardamine hirsuta HOM05D006772 ORTHO05D008367 1.9e-23 112.8 132 50.0
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 1.9e-23 112.8 110 51.8
Thhalv10017432m.g Eutrema salsugineum HOM05D006772 ORTHO05D008367 1.9e-23 112.8 131 48.9
BcaB06g28837 Brassica carinata HOM05D006772 ORTHO05D008367 3.2e-23 112.1 129 48.1
C04p64260 Brassica napus HOM05D006772 ORTHO05D008367 3.2e-23 112.1 130 46.2
BcaB02g09448 Brassica carinata HOM05D006772 ORTHO05D008367 4.2e-23 111.7 130 44.6
A04p26870 Brassica napus HOM05D006772 ORTHO05D008367 5.4e-23 111.3 130 46.2
BraA04t18187Z Brassica rapa HOM05D006772 ORTHO05D008367 5.4e-23 111.3 130 46.2
PGR031G2239 Punica granatum HOM05D006772 ORTHO05D008367 5.4e-23 111.3 99 58.6
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 9.3e-23 110.5 112 51.8
Sp4g17500 Schrenkiella parvula HOM05D006772 ORTHO05D008367 9.3e-23 110.5 131 45.0
Gorai.007G031500 Gossypium raimondii HOM05D006772 ORTHO05D008367 1.2e-22 110.2 94 59.6
Aa31LG9G15310 Aethionema arabicum HOM05D006772 ORTHO05D008367 4.6e-22 108.2 131 48.1
BcaC02g07718 Brassica carinata HOM05D006772 ORTHO05D008367 4.6e-22 108.2 130 45.4
BolC4t27910H Brassica oleracea HOM05D006772 ORTHO05D008367 4.6e-22 108.2 130 45.4
Dinv28946 Davidia involucrata HOM05D006772 ORTHO05D008367 6.0e-22 107.8 70 70.0
AT2G35290 Arabidopsis thaliana HOM05D006772 ORTHO05D008367 7.8e-22 107.5 132 47.7
Peaxi162Scf00102g00514 Petunia axillaris HOM05D006772 ORTHO05D008367 7.8e-22 107.5 127 48.0
AL4G31320 Arabidopsis lyrata HOM05D006772 ORTHO05D008367 1.5e-20 103.2 112 52.7
Carub.0004s1698 Capsella rubella HOM05D006772 ORTHO05D008367 4.3e-20 101.7 126 48.4
HPP92_011259 Vanilla planifolia HOM05D006772 ORTHO05D008367 7.3e-20 100.9 117 53.0
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 3.6e-19 98.6 93 51.6
Os03g0170100 Oryza sativa ssp. japonica HOM05D006772 ORTHO05D008367 1.8e-18 96.3 114 50.0
Zm00001eb402290 Zea mays HOM05D006772 ORTHO05D008367 6.9e-18 94.4 114 50.0
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 9.9e-17 90.5 121 41.3
EL10Ac5g12135 Beta vulgaris HOM05D003523 ORTHO05D008367 1.3e-13 80.1 74 58.1
MBI02_g18931_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.1e-12 77.0 125 40.8
SEGI_18606 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 1.1e-10 70.5 120 39.2
Pp3c1_8870 Physcomitrium patens HOM05D006772 ORTHO05D008367 1.6e-06 56.6 121 32.2


User provided reference genes

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