Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 2.4e-160 568.9 319 100.0
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 7.0e-144 514.2 319 91.5
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 9.6e-101 370.9 319 67.7
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 1.3e-97 360.5 324 65.1
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 1.9e-93 346.7 317 66.9
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 1.6e-92 343.6 308 64.3
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 3.1e-91 339.3 306 63.4
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 3.4e-90 335.9 309 63.8
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 5.8e-90 335.1 310 62.3
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 5.8e-90 335.1 309 64.1
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 7.6e-90 334.7 319 62.1
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 1.0e-89 334.3 313 62.6
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 1.7e-89 333.6 310 63.2
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 6.5e-89 331.6 318 61.0
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.1e-88 330.9 307 62.5
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 9.3e-88 327.8 315 62.5
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 1.6e-87 327.0 321 62.0
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.6e-87 327.0 307 61.9
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 7.9e-87 324.7 323 60.1
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.0e-86 324.3 307 60.9
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 1.3e-86 323.9 331 61.0
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 1.5e-85 320.5 321 62.9
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 1.9e-85 320.1 257 68.9
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 2.8e-84 316.2 307 63.2
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.4e-83 313.9 308 61.0
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 2.6e-82 309.7 294 64.6
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 1.4e-78 297.4 308 59.4
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 1.8e-78 297.0 321 55.5
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 5.1e-78 295.4 294 60.9
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 1.1e-77 294.3 293 61.8
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 1.5e-77 293.9 313 56.9
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 1.5e-77 293.9 294 60.5
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 2.0e-77 293.5 321 56.7
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 2.0e-77 293.5 319 54.9
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 2.8e-76 289.7 310 59.4
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 6.9e-75 285.0 304 58.9
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 9.1e-75 284.6 294 58.2
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 9.1e-75 284.6 299 59.2
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 2.0e-74 283.5 311 53.7
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 2.0e-74 283.5 292 57.2
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 2.6e-74 283.1 293 57.3
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 1.4e-72 277.3 306 55.6
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 1.9e-72 276.9 304 58.2
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 7.2e-72 275.0 307 55.0
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 3.6e-71 272.7 293 59.4
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 4.7e-71 272.3 312 54.5
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 1.8e-70 270.4 299 58.2
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 2.0e-69 266.9 317 53.6
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 1.7e-68 263.8 339 53.1
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 1.1e-67 261.2 293 56.7
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 3.5e-66 256.1 271 59.0
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 4.5e-66 255.8 290 58.3
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 2.2e-65 253.4 325 52.0
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 8.5e-65 251.5 286 56.3
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 3.2e-64 249.6 316 52.8
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 3.2e-64 249.6 316 52.8
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 3.2e-64 249.6 256 60.2
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 3.6e-63 246.1 301 54.8
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 3.0e-62 243.0 311 48.2
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 3.0e-62 243.0 261 55.6
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 3.0e-62 243.0 247 60.3
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 4.8e-60 235.7 315 50.8
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 3.1e-59 233.0 261 52.1
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 9.1e-59 231.5 255 56.1
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 6.5e-57 225.3 293 49.8
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 8.5e-57 224.9 320 47.8
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 1.1e-56 224.6 321 49.2
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 1.5e-56 224.2 325 48.0
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 1.9e-56 223.8 294 51.0
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 3.2e-56 223.0 263 53.2
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 7.2e-56 221.9 322 48.4
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 1.6e-55 220.7 321 48.0
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 2.1e-55 220.3 322 47.8
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 2.1e-55 220.3 318 47.2
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.7e-55 219.2 261 52.5
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 8.0e-55 218.4 321 47.7
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 1.4e-54 217.6 321 48.3
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 4.0e-54 216.1 270 48.5
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 4.4e-53 212.6 292 48.6
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 7.5e-53 211.8 290 52.8
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 1.4e-51 207.6 321 47.0
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 1.2e-50 204.5 234 50.9
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 1.3e-49 201.1 300 46.0
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 2.9e-49 199.9 293 46.1
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 5.0e-49 199.1 246 51.6
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 2.5e-48 196.8 291 48.1
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 7.2e-48 195.3 228 52.6
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 4.7e-47 192.6 307 45.9
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 1.0e-46 191.4 288 43.1
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 2.3e-46 190.3 203 51.2
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 3.0e-46 189.9 213 50.7
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 2.6e-45 186.8 268 48.5
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 2.2e-44 183.7 262 48.5
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 6.3e-44 182.2 322 41.9
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 8.6e-41 171.8 255 45.9
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 7.3e-40 168.7 195 47.7
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 2.8e-39 166.8 294 43.5
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 1.0e-38 164.9 260 47.7
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 1.8e-38 164.1 190 46.3
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 5.2e-38 162.5 222 46.4
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 4.9e-36 156.0 223 50.7
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 3.0e-33 146.7 271 39.5
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 1.9e-24 117.5 267 34.1
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 4.7e-23 112.8 79 77.2
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 4.0e-22 109.8 129 51.9
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 3.2e-19 100.1 272 33.8
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 7.1e-19 99.0 151 44.4
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 4.6e-18 96.3 243 35.0
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 1.0e-17 95.1 248 36.3
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 3.3e-16 90.1 303 33.0
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 1.1e-14 85.1 250 33.6
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 2.6e-13 80.5 194 40.2
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 7.6e-13 79.0 89 53.9
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 4.9e-12 76.3 349 31.5
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 8.4e-12 75.5 71 54.9
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 2.3e-09 67.4 292 32.5
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 2.5e-08 63.9 234 32.1
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 9.6e-08 62.0 104 48.1
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 5.2e-06 56.2 295 28.1


User provided reference genes

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