Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 1.6e-273 945.7 542 100.0
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 2.3e-195 686.0 482 76.8
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 3.7e-193 678.7 482 75.5
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 7.6e-191 671.0 482 75.3
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 2.2e-161 573.2 476 65.5
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 3.7e-161 572.4 476 65.3
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 4.8e-161 572.0 476 65.3
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 1.1e-160 570.9 464 65.5
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 2.4e-160 569.7 477 64.8
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 5.3e-160 568.5 480 64.8
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 6.5e-158 561.6 477 64.2
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 7.2e-157 558.1 472 63.8
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 1.2e-156 557.4 482 62.4
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.3e-155 553.1 473 63.4
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 1.1e-152 544.3 469 62.7
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 5.9e-151 538.5 481 60.3
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 6.5e-150 535.0 482 60.2
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 1.1e-149 534.3 477 61.6
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.5e-149 531.9 482 60.2
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 9.4e-149 531.2 461 63.8
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 4.7e-148 528.9 482 61.0
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 8.0e-148 528.1 481 59.9
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.0e-147 527.7 469 60.8
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.8e-147 526.9 482 58.9
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 6.8e-147 525.0 481 59.5
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 6.8e-147 525.0 482 61.2
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.5e-146 523.9 466 61.4
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 3.4e-146 522.7 458 61.4
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 5.7e-146 521.9 473 60.5
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 7.5e-146 521.5 464 60.6
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 7.5e-146 521.5 465 60.6
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 7.5e-146 521.5 478 60.5
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 2.2e-145 520.0 482 59.1
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 2.2e-145 520.0 470 60.2
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 3.7e-145 519.2 481 59.0
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 4.9e-145 518.8 481 59.0
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 6.3e-145 518.5 473 60.0
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 6.3e-145 518.5 482 58.5
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 8.3e-145 518.1 473 60.3
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 1.4e-144 517.3 482 59.3
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 5.4e-144 515.4 485 58.6
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.2e-143 514.2 469 60.6
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.6e-143 513.8 481 58.6
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.6e-143 513.8 485 57.9
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 5.9e-143 511.9 470 59.6
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 2.3e-142 510.0 463 60.7
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 5.0e-142 508.8 470 59.1
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 6.6e-142 508.4 482 56.8
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.5e-141 507.3 476 59.5
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 1.5e-141 507.3 478 59.4
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 1.9e-141 506.9 470 59.1
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.6e-141 505.4 481 58.0
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.8e-140 503.1 485 57.5
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 3.6e-140 502.7 482 57.5
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 4.7e-140 502.3 453 60.7
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.0e-139 501.1 469 58.6
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 4.0e-139 499.2 485 57.7
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 4.0e-139 499.2 466 59.9
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 1.2e-138 497.7 462 59.3
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 3.4e-138 496.1 482 56.4
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 3.4e-138 496.1 517 54.4
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 3.4e-138 496.1 423 63.4
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 9.8e-138 494.6 514 55.8
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 1.1e-136 491.1 483 56.7
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.1e-136 491.1 423 62.9
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 1.4e-136 490.7 467 57.4
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.8e-136 490.3 465 58.9
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 2.4e-136 490.0 466 59.2
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.7e-134 483.8 465 57.6
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 2.5e-133 479.9 432 61.3
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 9.5e-133 478.0 460 58.3
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 2.1e-132 476.9 466 58.2
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 1.4e-131 474.2 483 57.1
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 4.0e-131 472.6 307 78.8
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 1.7e-129 467.2 474 54.2
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 7.0e-128 461.8 463 55.9
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 8.6e-126 454.9 464 54.5
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 1.1e-125 454.5 464 54.3
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 7.5e-122 441.8 484 52.9
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 4.9e-121 439.1 487 52.6
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 2.1e-119 433.7 476 52.7
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 3.5e-119 433.0 476 52.3
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 6.6e-118 428.7 476 51.7
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 4.3e-117 426.0 308 70.5
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 2.8e-116 423.3 469 51.2
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 5.2e-115 419.1 308 69.5
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 2.4e-112 410.2 458 49.8
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 7.1e-112 408.7 494 50.4
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 3.9e-110 402.9 467 50.7
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 5.1e-110 402.5 468 49.8
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 3.3e-109 399.8 512 48.2
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 3.6e-108 396.4 486 50.2
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 1.4e-107 394.4 490 49.6
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 1.4e-107 394.4 501 48.7
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 3.1e-107 393.3 487 50.1
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 3.1e-107 393.3 487 50.1
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 1.7e-105 387.5 482 49.4
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 4.9e-105 386.0 495 48.1
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.8e-100 370.2 237 79.3
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.5e-93 347.8 482 44.8
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 2.8e-92 343.6 469 45.4
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 2.8e-92 343.6 469 45.4
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 4.8e-92 342.8 477 45.3
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 4.8e-92 342.8 477 45.3
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 4.0e-91 339.7 473 44.8
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 7.4e-85 318.9 239 71.5
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 9.6e-85 318.5 308 58.4
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 2.2e-81 307.4 215 67.9
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 2.2e-57 227.6 139 82.7
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 3.6e-55 220.3 457 33.3
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 1.3e-49 201.8 250 51.2
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 1.1e-43 182.2 129 74.4
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 1.7e-41 174.9 152 58.6
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 6.5e-41 172.9 492 28.5
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 4.2e-40 170.2 471 29.3
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.4e-35 155.2 122 63.1
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 1.8e-35 154.8 485 29.5
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 3.8e-33 147.1 77 89.6
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 7.2e-32 142.9 160 54.4
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 9.5e-32 142.5 218 44.0
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 2.2e-28 131.3 196 40.8
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 2.8e-28 131.0 313 32.3
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 2.7e-26 124.4 119 58.0
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 3.8e-25 120.6 328 32.0
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 3.4e-21 107.5 76 72.4
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 6.8e-14 83.2 46 87.0
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 9.2e-11 72.8 48 72.9


User provided reference genes

Program Settings