Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0013800 Salix brachista HOM05D005050 ORTHO05D006198 8.4e-120 433.7 223 100.0
Potri.003G021900 Populus trichocarpa HOM05D005050 ORTHO05D006198 1.4e-29 134.0 233 47.2
Potri.001G208200 Populus trichocarpa HOM05D005050 ORTHO05D006198 7.6e-28 128.3 235 45.1
Manes.10G132900 Manihot esculenta HOM05D005050 ORTHO05D006198 2.2e-27 126.7 233 44.2
Sabra01G0160800 Salix brachista HOM05D005050 ORTHO05D006198 4.9e-27 125.6 233 43.8
Cpa.g.sc2.30 Carica papaya HOM05D005050 ORTHO05D006198 1.0e-24 117.9 233 41.6
Duzib052G0527 Durio zibethinus HOM05D005050 ORTHO05D006198 1.0e-24 117.9 227 42.7
Ciclev10001338m.g Citrus clementina HOM05D005050 ORTHO05D006198 1.8e-24 117.1 215 43.7
COL.COLO4_17901 Corchorus olitorius HOM05D005050 ORTHO05D006198 6.7e-24 115.2 227 41.0
Gohir.A01G001100 Gossypium hirsutum HOM05D005050 ORTHO05D006198 1.1e-23 114.4 226 42.5
Gohir.D01G000800 Gossypium hirsutum HOM05D005050 ORTHO05D006198 1.1e-23 114.4 226 42.5
Gorai.002G001300 Gossypium raimondii HOM05D005050 ORTHO05D006198 1.1e-23 114.4 226 42.5
GSVIVG01029689001 Vitis vinifera HOM05D005050 ORTHO05D006198 1.1e-23 114.4 234 41.0
Actinidia39062 Actinidia chinensis HOM05D005050 ORTHO05D006198 3.3e-23 112.8 229 41.5
Thecc.02G041900 Theobroma cacao HOM05D005050 ORTHO05D006198 3.3e-23 112.8 227 41.9
unitig_27.g24937 Utricularia gibba HOM05D005050 ORTHO05D006198 5.6e-23 112.1 228 40.4
QL11p019153 Quercus lobata HOM05D005050 ORTHO05D006198 7.4e-23 111.7 232 40.1
MD15G1419700 Malus domestica HOM05D005050 ORTHO05D006198 1.3e-22 110.9 227 41.4
Cfa005552 Carpinus fangiana HOM05D005050 ORTHO05D006198 1.6e-22 110.5 232 40.1
Eucgr.G00618 Eucalyptus grandis HOM05D005050 ORTHO05D006198 2.1e-22 110.2 229 41.0
Rhsim11G0132400 Rhododendron simsii HOM05D005050 ORTHO05D006198 3.6e-22 109.4 235 38.7
PGR042G1149 Punica granatum HOM05D005050 ORTHO05D006198 1.1e-21 107.8 228 41.2
TAR628G0295 Trochodendron aralioides HOM05D005050 ORTHO05D006198 1.1e-21 107.8 232 40.9
Sc10g0004970 Simmondsia chinensis HOM05D005050 ORTHO05D006198 1.8e-21 107.1 234 38.9
Dinv19345 Davidia involucrata HOM05D005050 ORTHO05D006198 3.1e-21 106.3 228 40.4
TWI14G0535 Tripterygium wilfordii HOM05D005050 ORTHO05D006198 3.1e-21 106.3 229 38.9
Prupe.1G564400 Prunus persica HOM05D005050 ORTHO05D006198 4.0e-21 105.9 227 43.2
Dinv24255 Davidia involucrata HOM05D005050 ORTHO05D006198 5.3e-21 105.5 228 39.5
MD08G1227300 Malus domestica HOM05D005050 ORTHO05D006198 5.3e-21 105.5 229 41.9
unitig_699.g19082 Utricularia gibba HOM05D005050 ORTHO05D006198 6.9e-21 105.1 188 42.0
Duzib132G0934 Durio zibethinus HOM05D005050 ORTHO05D006198 9.0e-21 104.8 190 44.2
CSS0001826 Camellia sinensis var. sinensis HOM05D005050 ORTHO05D006198 2.0e-20 103.6 229 39.7
THA.LOC104805935 Tarenaya hassleriana HOM05D005050 ORTHO05D006198 4.5e-20 102.4 230 39.1
ClCG05G009900 Citrullus lanatus HOM05D005050 ORTHO05D006198 7.6e-20 101.7 232 39.7
CiPaw.06G149400 Carya illinoinensis HOM05D005050 ORTHO05D006198 9.9e-20 101.3 215 40.5
FvH4_5g29810 Fragaria vesca HOM05D005050 ORTHO05D006198 9.9e-20 101.3 230 37.8
CsaV3_3G018690 Cucumis sativus L. HOM05D005050 ORTHO05D006198 1.3e-19 100.9 231 39.8
MELO3C019500.2 Cucumis melo HOM05D005050 ORTHO05D006198 1.7e-19 100.5 231 39.8
Lsat_1_v5_gn_9_116221 Lactuca sativa HOM05D005050 ORTHO05D006198 1.7e-19 100.5 226 39.8
CiPaw.05G042200 Carya illinoinensis HOM05D005050 ORTHO05D006198 2.2e-19 100.1 232 37.9
FAN13G0813 Fragaria x ananassa HOM05D005050 ORTHO05D006198 2.2e-19 100.1 230 37.0
Nn1g08554 Nelumbo nucifera HOM05D005050 ORTHO05D006198 2.2e-19 100.1 237 39.2
MSTRG.16540 Avicennia marina HOM05D005050 ORTHO05D006198 2.9e-19 99.8 229 38.0
FAN18G3347 Fragaria x ananassa HOM05D005050 ORTHO05D006198 2.9e-19 99.8 230 37.4
FAN04G2386 Fragaria x ananassa HOM05D005050 ORTHO05D006198 6.4e-19 98.6 230 37.4
RcHm_v2.0_Chr7g0223331 Rosa chinensis HOM05D005050 ORTHO05D006198 8.4e-19 98.2 239 36.8
arahy.Tifrunner.gnm1.ann1.X2Y1CG Arachis hypogaea HOM05D005050 ORTHO05D006198 1.1e-18 97.8 222 39.2
Sed0002635 Sechium edule HOM05D005050 ORTHO05D006198 1.1e-18 97.8 229 40.2
Atru.chr6.1005 Acer truncatum HOM05D005050 ORTHO05D006198 1.9e-18 97.1 209 39.7
Lalb_Chr07g0189191 Lupinus albus HOM05D005050 ORTHO05D006198 1.9e-18 97.1 219 38.8
TWI23G0447 Tripterygium wilfordii HOM05D005050 ORTHO05D006198 1.9e-18 97.1 215 39.1
arahy.Tifrunner.gnm1.ann1.V19TN9 Arachis hypogaea HOM05D005050 ORTHO05D006198 2.4e-18 96.7 224 38.8
TWI59G1202 Tripterygium wilfordii HOM05D005050 ORTHO05D006198 2.4e-18 96.7 231 38.1
PGSC0003DMG400029778 Solanum tuberosum HOM05D005050 ORTHO05D006198 3.2e-18 96.3 230 37.0
Lalb_Chr12g0208631 Lupinus albus HOM05D005050 ORTHO05D006198 5.5e-18 95.5 215 39.1
Cc02_g22180 Coffea canephora HOM05D005050 ORTHO05D006198 9.3e-18 94.7 230 37.4
Thhalv10007720m.g Eutrema salsugineum HOM05D005050 ORTHO05D006198 9.3e-18 94.7 228 38.6
Sed0013576 Sechium edule HOM05D005050 ORTHO05D006198 9.3e-18 94.7 229 38.9
Sp1g13510 Schrenkiella parvula HOM05D005050 ORTHO05D006198 1.2e-17 94.4 231 39.4
Nn5g27962 Nelumbo nucifera HOM05D005050 ORTHO05D006198 2.7e-17 93.2 234 38.0
CANSAT11G1507 Cannabis sativa HOM05D005050 ORTHO05D006198 4.6e-17 92.4 222 38.7
CAN.G1352.15 Capsicum annuum HOM05D005050 ORTHO05D006198 4.6e-17 92.4 229 36.2
ECA240G2670 Erigeron canadensis HOM05D005050 ORTHO05D006198 1.3e-16 90.9 223 39.0
SHI16611 Sapria himalayana HOM05D005050 ORTHO05D006198 1.3e-16 90.9 234 36.3
SGA_v2.0_scaffold1G00335 Striga asiatica HOM05D005050 ORTHO05D006198 1.3e-16 90.9 256 35.5
VMungo0251G1671 Vigna mungo HOM05D005050 ORTHO05D006198 1.8e-16 90.5 230 37.0
Carub.0001s1495 Capsella rubella HOM05D005050 ORTHO05D006198 6.7e-16 88.6 230 37.0
HanXRQChr03g0066561 Helianthus annuus HOM05D005050 ORTHO05D006198 2.5e-15 86.7 231 37.2
Hma1.2p1_0557F.1_g178270 Hydrangea macrophylla HOM05D005050 ORTHO05D006198 2.5e-15 86.7 228 36.0
Glyma.15G048700 Glycine max HOM05D005050 ORTHO05D006198 5.6e-15 85.5 231 35.5
AL1G27280 Arabidopsis lyrata HOM05D005050 ORTHO05D006198 1.3e-14 84.3 230 37.4
BolC8t52057H Brassica oleracea HOM05D005050 ORTHO05D006198 1.3e-14 84.3 228 37.3
Hund13068 Selenicereus undatus HOM05D005050 ORTHO05D006198 1.3e-14 84.3 230 35.7
AT1G15200 Arabidopsis thaliana HOM05D005050 ORTHO05D006198 1.6e-14 84.0 230 36.5
AUR62025851 Chenopodium quinoa HOM05D005050 ORTHO05D006198 1.6e-14 84.0 229 35.4
Glyma.08G184100 Glycine max HOM05D005050 ORTHO05D006198 3.7e-14 82.8 233 35.2
BcaB02g06585 Brassica carinata HOM05D005050 ORTHO05D006198 4.8e-14 82.4 229 36.7
BolC5t30067H Brassica oleracea HOM05D005050 ORTHO05D006198 4.8e-14 82.4 229 36.7
arahy.Tifrunner.gnm1.ann1.UX2R4L Arachis hypogaea HOM05D005050 ORTHO05D006198 8.1e-14 81.6 220 37.7
Lj6g0001640 Lotus japonicus HOM05D005050 ORTHO05D006198 8.1e-14 81.6 232 36.2
PSO782G5384 Papaver somniferum HOM05D005050 ORTHO05D006198 8.1e-14 81.6 196 40.8
BraA06t24298Z Brassica rapa HOM05D005050 ORTHO05D006198 1.1e-13 81.3 229 36.2
TPR.G2134 Trifolium pratense HOM05D005050 ORTHO05D006198 1.1e-13 81.3 228 36.8
A06p11180 Brassica napus HOM05D005050 ORTHO05D006198 1.4e-13 80.9 229 36.2
PSO170G5110 Papaver somniferum HOM05D005050 ORTHO05D006198 1.8e-13 80.5 232 37.1
SalBow5G1811 Salvia bowleyana HOM05D005050 ORTHO05D006198 1.8e-13 80.5 84 56.0
SalBow5G5549 Salvia bowleyana HOM05D005050 ORTHO05D006198 1.8e-13 80.5 84 56.0
CARHR015720 Cardamine hirsuta HOM05D005050 ORTHO05D006198 2.4e-13 80.1 231 35.1
Phvul.006G211700 Phaseolus vulgaris HOM05D005050 ORTHO05D006198 3.1e-13 79.7 232 34.9
BcaC05g25448 Brassica carinata HOM05D005050 ORTHO05D006198 4.0e-13 79.3 229 36.2
C05p13300 Brassica napus HOM05D005050 ORTHO05D006198 4.0e-13 79.3 229 36.2
Medtr2g007800 Medicago truncatula HOM05D005050 ORTHO05D006198 4.0e-13 79.3 228 36.0
Migut.B00660 Erythranthe guttata HOM05D005050 ORTHO05D006198 5.3e-13 79.0 229 33.2
Nitab4.5_0003071g0060 Nicotiana tabacum HOM05D005050 ORTHO05D006198 1.5e-12 77.4 204 33.3
arahy.Tifrunner.gnm1.ann1.5TH0SF Arachis hypogaea HOM05D005050 ORTHO05D006198 2.0e-12 77.0 220 36.4
Psat1g219800 Pisum sativum HOM05D005050 ORTHO05D006198 2.0e-12 77.0 238 33.6
DCAR_029238 Daucus carota HOM05D005050 ORTHO05D006198 2.6e-12 76.6 224 36.2
Oeu026060.1 Olea europaea HOM05D005050 ORTHO05D006198 2.6e-12 76.6 84 53.6
arahy.Tifrunner.gnm1.ann1.HMQ04Z Arachis hypogaea HOM05D005050 ORTHO05D006198 3.4e-12 76.3 219 37.0
Aa31LG1G10 Aethionema arabicum HOM05D005050 ORTHO05D006198 5.8e-12 75.5 208 37.5
MBI06_g01048_MAGBIO Magnolia biondii HOM05D005050 ORTHO05D006198 5.8e-12 75.5 232 33.2
Solyc01g104560.3 Solanum lycopersicum HOM05D005050 ORTHO05D006198 2.2e-11 73.6 228 33.3
CDE01G0517 Ceratophyllum demersum HOM05D005050 ORTHO05D006198 2.9e-11 73.2 229 34.5
Hma1.2p1_0557F.1_g178260 Hydrangea macrophylla HOM05D005050 ORTHO05D006198 6.5e-11 72.0 270 31.5
CDE12G0224 Ceratophyllum demersum HOM05D005050 ORTHO05D006198 8.4e-11 71.6 229 33.6
Sopen01g047070 Solanum pennellii HOM05D005050 ORTHO05D006198 8.4e-11 71.6 228 32.9
AagrBONN_evm.TU.Sc2ySwM_344.3376 Anthoceros agrestis HOM05D005050 ORTHO05D006198 1.1e-10 71.2 212 34.4
HPP92_002179 Vanilla planifolia HOM05D005050 ORTHO05D006198 2.5e-10 70.1 231 32.9
FAN08G2278 Fragaria x ananassa HOM05D005050 ORTHO05D006198 3.2e-10 69.7 219 33.8
HPP92_002226 Vanilla planifolia HOM05D005050 ORTHO05D006198 5.5e-10 68.9 231 32.9
Haze_01617 Corylus avellana HOM05D005050 ORTHO05D006198 7.1e-10 68.6 83 51.8
Nitab4.5_0009907g0040 Nicotiana tabacum HOM05D005050 ORTHO05D006198 9.3e-10 68.2 205 31.2
TAR161G0004 Trochodendron aralioides HOM05D005050 ORTHO05D006198 9.3e-10 68.2 87 54.0
AUR62029865 Chenopodium quinoa HOM05D005050 ORTHO05D006198 2.1e-09 67.0 62 67.7
Os03g0701900 Oryza sativa ssp. japonica HOM05D005050 ORTHO05D006198 2.1e-09 67.0 222 35.6
Aqoxy5G02481 Aquilegia oxysepala HOM05D005050 ORTHO05D006198 7.9e-09 65.1 224 33.5
Oeu000199.1 Olea europaea HOM05D005050 ORTHO05D006198 8.7e-08 61.6 230 32.2
Lj9A312G31 Lonicera japonica HOM05D005050 ORTHO05D006198 1.1e-07 61.2 65 60.0
C08p45110 Brassica napus HOM05D005050 ORTHO05D006198 1.5e-07 60.8 176 35.2
vmacro01791 Vaccinium macrocarpon HOM05D005050 ORTHO05D006198 2.5e-07 60.1 63 57.1
EL10Ac2g03230 Beta vulgaris HOM05D005050 ORTHO05D006198 5.7e-07 58.9 204 32.4
Ah.10g032530 Amaranthus hybridus HOM05D005050 ORTHO05D006198 7.4e-07 58.5 202 31.2
BcaB03g14555 Brassica carinata HOM05D005050 ORTHO05D006198 1.3e-06 57.8 91 47.3
BcaNung05518 Brassica carinata HOM05D005050 ORTHO05D006198 1.3e-06 57.8 172 34.9
ATR0121G012 Amborella trichopoda HOM05D005050 ORTHO05D006198 3.7e-06 56.2 228 33.8
Mapoly0066s0029 Marchantia polymorpha HOM05D005050 ORTHO05D006198 6.3e-06 55.5 239 28.5
Oeu026061.1 Olea europaea HOM05D005050 ORTHO05D006198 6.3e-06 55.5 56 57.1


User provided reference genes

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