Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0011900 Salix brachista HOM05D000033 ORTHO05D010114 3.7e-119 431.8 259 100.0
Potri.003G020600 Populus trichocarpa HOM05D000033 ORTHO05D010114 5.5e-62 241.9 317 56.8
Thecc.02G140800 Theobroma cacao HOM05D000033 ORTHO05D010114 1.5e-14 84.3 286 30.1
Ciclev10028004m.g Citrus clementina HOM05D000033 ORTHO05D010114 3.3e-14 83.2 298 38.9
Duzib248G1670 Durio zibethinus HOM05D000033 ORTHO05D010114 3.3e-14 83.2 286 30.4
Gohir.D02G196500 Gossypium hirsutum HOM05D000033 ORTHO05D010114 8.0e-13 78.6 296 29.7
Eucgr.G00775 Eucalyptus grandis HOM05D000033 ORTHO05D010114 8.9e-12 75.1 298 35.6
FAN18G0097 Fragaria x ananassa HOM05D000033 ORTHO05D010114 1.5e-11 74.3 305 33.1
Gohir.A03G173400 Gossypium hirsutum HOM05D000033 ORTHO05D010114 4.4e-11 72.8 71 59.2
Gorai.005G219500 Gossypium raimondii HOM05D000033 ORTHO05D010114 4.4e-11 72.8 71 59.2
CSS0006077 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D010114 5.7e-11 72.4 299 27.4
RcHm_v2.0_Chr7g0180261 Rosa chinensis HOM05D000033 ORTHO05D010114 9.8e-11 71.6 297 26.6
FAN04G2065 Fragaria x ananassa HOM05D000033 ORTHO05D010114 1.3e-10 71.2 300 32.7
Dinv09043 Davidia involucrata HOM05D000033 ORTHO05D010114 1.7e-10 70.9 272 32.4
PGR042G0676 Punica granatum HOM05D000033 ORTHO05D010114 1.7e-10 70.9 319 28.8
FvH4_5g15840 Fragaria vesca HOM05D000033 ORTHO05D010114 2.8e-10 70.1 299 32.4
FAN08G3128 Fragaria x ananassa HOM05D000033 ORTHO05D010114 3.7e-10 69.7 298 26.8
FAN13G2614 Fragaria x ananassa HOM05D000033 ORTHO05D010114 2.4e-09 67.0 299 28.8
Lj9A320T30 Lonicera japonica HOM05D000033 ORTHO05D010114 2.4e-09 67.0 295 32.2
COL.COLO4_24969 Corchorus olitorius HOM05D000033 ORTHO05D010114 3.2e-09 66.6 299 32.8
ClCG10G009190 Citrullus lanatus HOM05D000033 ORTHO05D010114 7.0e-09 65.5 71 50.7
MELO3C019023.2 Cucumis melo HOM05D000033 ORTHO05D010114 7.0e-09 65.5 72 55.6
CsaV3_4G009350 Cucumis sativus L. HOM05D000033 ORTHO05D010114 9.2e-09 65.1 71 54.9
Oeu047364.1 Olea europaea HOM05D000033 ORTHO05D010114 1.6e-08 64.3 243 37.4
Migut.B00620 Erythranthe guttata HOM05D000033 ORTHO05D010114 2.0e-08 63.9 81 43.2
Cc02_g21660 Coffea canephora HOM05D000033 ORTHO05D010114 2.7e-08 63.5 69 49.3
Sopen01g047620 Solanum pennellii HOM05D000033 ORTHO05D010114 3.5e-08 63.2 68 52.9
CSS0036892 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D010114 4.5e-08 62.8 64 56.2
Sed0000865 Sechium edule HOM05D000033 ORTHO05D010114 4.5e-08 62.8 76 48.7
MD10G1049600 Malus domestica HOM05D000033 ORTHO05D010114 7.8e-08 62.0 65 53.8
Nitab4.5_0003858g0020 Nicotiana tabacum HOM05D000033 ORTHO05D010114 7.8e-08 62.0 78 47.4
Peaxi162Scf00001g00241 Petunia axillaris HOM05D000033 ORTHO05D010114 7.8e-08 62.0 78 47.4
PGSC0003DMG400012588 Solanum tuberosum HOM05D000033 ORTHO05D010114 7.8e-08 62.0 81 44.4
Potri.001G209700 Populus trichocarpa HOM05D000033 ORTHO05D010114 1.0e-07 61.6 37 78.4
Migut.N01062 Erythranthe guttata HOM05D000033 ORTHO05D010114 1.3e-07 61.2 81 48.1
TWI59G1225 Tripterygium wilfordii HOM05D000033 ORTHO05D010114 1.3e-07 61.2 293 37.9
SalBow6G3765 Salvia bowleyana HOM05D000033 ORTHO05D010114 2.3e-07 60.5 288 31.2
SalBow6G4095 Salvia bowleyana HOM05D000033 ORTHO05D010114 2.3e-07 60.5 288 31.2
Nitab4.5_0003174g0010 Nicotiana tabacum HOM05D000033 ORTHO05D010114 2.9e-07 60.1 81 43.2
Prupe.8G063300 Prunus persica HOM05D000033 ORTHO05D010114 3.9e-07 59.7 71 52.1
Solyc01g105080.2 Solanum lycopersicum HOM05D000033 ORTHO05D010114 3.9e-07 59.7 78 46.2
Aqoxy6G00582 Aquilegia oxysepala HOM05D000033 ORTHO05D010114 8.6e-07 58.5 73 43.8
QL11p020484 Quercus lobata HOM05D000033 ORTHO05D010114 1.5e-06 57.8 64 48.4
Gohir.D13G055225 Gossypium hirsutum HOM05D000033 ORTHO05D010114 4.3e-06 56.2 253 27.3
Gohir.A13G066200 Gossypium hirsutum HOM05D000033 ORTHO05D010114 9.5e-06 55.1 253 26.9


User provided reference genes

Program Settings