Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0009200 Salix brachista HOM05D002599 ORTHO05D001895 3.8e-66 254.6 121 100.0
Sabra03G0009800 Salix brachista HOM05D002599 ORTHO05D001895 3.8e-66 254.6 121 100.0
Sabra03G0008900 Salix brachista HOM05D002599 ORTHO05D001895 6.7e-63 243.8 119 97.5
Sabra03G0009500 Salix brachista HOM05D002599 ORTHO05D001895 5.3e-60 234.2 122 93.4
Sabra03G0008700 Salix brachista HOM05D002599 ORTHO05D001895 5.5e-57 224.2 112 93.8
Sabra03G0009000 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-51 206.5 120 84.2
Sabra03G0009300 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-51 206.5 120 84.2
Sabra03G0009600 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-51 206.5 120 84.2
Sabra03G0009900 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-51 206.5 120 84.2
Potri.003G015900 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.5e-50 200.3 118 80.5
Potri.003G017566 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-49 199.9 117 82.1
Potri.003G018400 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.4e-49 196.8 118 78.0
Potri.004G218101 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-46 189.1 118 73.7
Sabra03G0012300 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-44 183.3 119 78.2
Sabra01G0164100 Salix brachista HOM05D002599 ORTHO05D001895 8.0e-40 167.2 117 67.5
Sabra01G0165000 Salix brachista HOM05D002599 ORTHO05D001895 2.2e-37 159.1 110 69.1
Sabra01G0164500 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-33 146.7 101 67.3
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 7.0e-20 100.9 117 43.6
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 6.0e-19 97.8 116 40.5
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.8e-19 97.4 122 44.3
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.0e-18 97.1 118 43.2
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.0e-18 97.1 116 40.5
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.3e-18 95.9 118 42.4
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.5e-17 92.4 119 40.3
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 3.3e-17 92.0 116 38.8
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 4.3e-17 91.7 115 39.1
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 9.5e-17 90.5 114 41.2
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 9.5e-17 90.5 119 41.2
Manes.10G122700 Manihot esculenta HOM05D002599 ORTHO05D001895 1.2e-16 90.1 111 40.5
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-16 89.7 109 42.2
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-16 89.7 113 37.2
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-16 89.7 114 37.7
Thecc.02G091200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.8e-16 89.0 117 42.7
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 2.8e-16 89.0 113 43.4
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.2e-16 87.8 117 41.9
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 8.1e-16 87.4 117 41.9
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-15 87.0 109 40.4
Potri.003G011250 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.8e-15 84.3 114 38.6
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 8.9e-15 84.0 115 37.4
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 8.9e-15 84.0 110 39.1
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-14 83.6 117 41.0
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-14 83.2 115 38.3
Thecc.02G090900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.5e-14 83.2 107 40.2
Gorai.005G241200 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.0e-14 82.8 117 40.2
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 2.0e-14 82.8 110 40.9
Gohir.A03G192100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-14 82.4 114 43.0
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-14 82.4 111 40.5
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-14 82.4 111 37.8
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.4e-14 82.0 112 39.3
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.4e-14 81.6 117 40.2
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.4e-14 81.6 117 40.2
Gorai.005G241300 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.5e-14 80.9 116 40.5
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.5e-14 80.9 112 40.2
Gorai.013G039500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-13 80.1 115 41.7
Thecc.02G091800 Theobroma cacao HOM05D008353 ORTHO05D001895 2.2e-13 79.3 120 37.5
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.9e-13 79.0 114 37.7
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.9e-13 79.0 114 37.7
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.9e-13 79.0 114 37.7
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.9e-13 78.2 112 40.2
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.9e-13 78.2 110 39.1
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.4e-13 77.8 112 36.6
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.3e-13 77.4 112 38.4
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-12 77.0 99 38.4
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-12 76.6 116 37.9
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 1.9e-12 76.3 112 38.4
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.4e-12 75.9 116 37.9
Gohir.D13G034950 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.4e-12 75.9 115 41.7
COL.COLO4_17741 Corchorus olitorius HOM05D001654 ORTHO05D002773 3.2e-12 75.5 111 39.6
Gohir.D04G176033 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.1e-12 75.1 99 38.4
Gorai.012G167500 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.1e-12 75.1 99 38.4
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 7.1e-12 74.3 117 31.6
Thecc.02G024900 Theobroma cacao HOM05D002599 ORTHO05D001895 7.1e-12 74.3 107 40.2
COL.COLO4_11751 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.2e-11 73.6 105 40.0
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-11 73.6 113 37.2
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 1.6e-11 73.2 87 43.7
Gohir.D04G176568 Gossypium hirsutum HOM05D002599 ORTHO05D012670 1.6e-11 73.2 103 39.8
Gorai.012G167400 Gossypium raimondii HOM05D019153 ORTHO05D047868 1.6e-11 73.2 108 40.7
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-11 73.2 111 37.8
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.1e-11 72.8 87 42.5
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-11 72.8 111 38.7
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 2.1e-11 72.8 117 35.0
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 2.1e-11 72.8 113 37.2
Thecc.02G092000 Theobroma cacao HOM05D008353 ORTHO05D001895 4.6e-11 71.6 120 34.2
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 6.0e-11 71.2 113 35.4
Gohir.D04G176000 Gossypium hirsutum HOM05D019153 ORTHO05D047868 7.8e-11 70.9 108 39.8
Gorai.012G167300 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.8e-11 70.9 105 39.0
Manes.10G124700 Manihot esculenta HOM05D008353 ORTHO05D011820 7.8e-11 70.9 116 31.0
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 7.8e-11 70.9 109 37.6
Gohir.A04G130700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-10 70.5 105 38.1
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.0e-10 70.5 107 36.4
Thecc.02G091000 Theobroma cacao HOM05D002599 ORTHO05D001895 1.0e-10 70.5 104 38.5
Gohir.A13G036650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-10 70.1 119 39.5
Gohir.D04G176484 Gossypium hirsutum HOM05D002599 ORTHO05D029872 1.3e-10 70.1 103 38.8
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.3e-10 70.1 115 30.4
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.7e-10 69.7 114 35.1
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 1.7e-10 69.7 115 34.8
Ciclev10003967m.g Citrus clementina HOM05D022543 ORTHO05D001895 2.3e-10 69.3 104 37.5
COL.COLO4_11744 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.3e-10 69.3 80 42.5
Gohir.D04G175900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.3e-10 69.3 105 38.1
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-10 69.3 111 35.1
Thecc.02G091500 Theobroma cacao HOM05D008353 ORTHO05D001895 2.3e-10 69.3 120 34.2
Gohir.A04G133150 Gossypium hirsutum HOM05D002599 ORTHO05D029872 3.0e-10 68.9 104 38.5
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 3.0e-10 68.9 112 32.1
Atru.chr3.612 Acer truncatum HOM05D002599 ORTHO05D001895 3.9e-10 68.6 111 38.7
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.1e-10 68.2 116 31.9
Gorai.012G168700 Gossypium raimondii HOM05D002599 ORTHO05D029872 5.1e-10 68.2 103 37.9
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.1e-10 68.2 112 32.1
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.1e-10 68.2 111 33.3
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 5.1e-10 68.2 88 37.5
Gohir.A04G130712 Gossypium hirsutum HOM05D019153 ORTHO05D001895 6.6e-10 67.8 109 37.6
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 6.6e-10 67.8 104 38.5
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.6e-10 67.8 110 31.8
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.6e-10 67.8 110 31.8
Potri.015G017000 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.6e-10 67.8 111 33.3
Sabra15G0010100 Salix brachista HOM05D002599 ORTHO05D001895 6.6e-10 67.8 108 35.2
COL.COLO4_17754 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.6e-10 67.4 101 41.6
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 8.6e-10 67.4 103 42.7
Thecc.02G021800 Theobroma cacao HOM05D002599 ORTHO05D012670 8.6e-10 67.4 103 34.0
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 8.6e-10 67.4 117 35.0
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-09 67.0 108 32.4
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.1e-09 67.0 108 32.4
Gorai.012G169000 Gossypium raimondii HOM05D002599 ORTHO05D029872 1.1e-09 67.0 102 38.2
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.5e-09 66.6 109 35.8
Gohir.A12G027233 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-09 66.6 106 35.8
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-09 66.2 107 35.5
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.9e-09 66.2 116 34.5
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.5e-09 65.9 111 33.3
Gohir.D04G176470 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.5e-09 65.9 102 34.3
Gohir.D04G176554 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.5e-09 65.9 102 34.3
Manes.07G021400 Manihot esculenta HOM05D008353 ORTHO05D001895 2.5e-09 65.9 115 32.2
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 2.5e-09 65.9 112 31.2
Duzib147G0900 Durio zibethinus HOM05D002599 ORTHO05D001895 3.3e-09 65.5 89 36.0
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 3.3e-09 65.5 104 35.6
Atru.chr3.613 Acer truncatum HOM05D002599 ORTHO05D001895 4.3e-09 65.1 116 38.8
Gohir.A04G133075 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.3e-09 65.1 105 33.3
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 4.3e-09 65.1 116 29.3
Gohir.D12G026733 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.3e-09 64.3 106 35.8
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.3e-09 64.3 111 33.3
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.5e-09 63.9 108 34.3
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-08 63.5 117 29.1
COL.COLO4_17753 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.6e-08 63.2 112 32.1
Sabra15G0012600 Salix brachista HOM05D002599 ORTHO05D001895 1.6e-08 63.2 103 35.0
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 1.6e-08 63.2 83 41.0
Thecc.02G022200 Theobroma cacao HOM05D002599 ORTHO05D012670 1.6e-08 63.2 103 34.0
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.1e-08 62.8 112 31.2
Sabra15G0012700 Salix brachista HOM05D002599 ORTHO05D001895 2.8e-08 62.4 87 36.8
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 3.6e-08 62.0 110 28.2
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.6e-08 62.0 111 32.4
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.6e-08 62.0 75 42.7
Potri.015G016700 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.6e-08 62.0 107 31.8
Gohir.D02G213400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.7e-08 61.6 86 36.0
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.2e-08 61.2 116 32.8
Thecc.04G013200 Theobroma cacao HOM05D002599 ORTHO05D001895 6.2e-08 61.2 91 39.6
Manes.10G124912 Manihot esculenta HOM05D002599 ORTHO05D001895 1.4e-07 60.1 125 28.8
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.4e-07 60.1 105 37.1
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-07 59.7 105 35.2
Thecc.04G013500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.8e-07 59.7 95 36.8
Gohir.D02G213300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.3e-07 59.3 83 36.1
COL.COLO4_17749 Corchorus olitorius HOM05D002599 ORTHO05D012670 3.1e-07 58.9 98 38.8
Gohir.D04G176200 Gossypium hirsutum HOM05D002599 ORTHO05D012670 3.1e-07 58.9 101 31.7
Gohir.A04G132600 Gossypium hirsutum HOM05D002599 ORTHO05D012670 4.0e-07 58.5 101 31.7
COL.COLO4_11750 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.2e-07 58.2 131 32.1
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.8e-07 57.8 121 32.2
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.2e-06 57.0 105 30.5
Gorai.012G167700 Gossypium raimondii HOM05D002599 ORTHO05D012670 1.5e-06 56.6 101 30.7
Thecc.04G013400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.5e-06 56.6 88 35.2
Duzib052G1144 Durio zibethinus HOM05D002599 ORTHO05D001895 2.0e-06 56.2 111 34.2
Manes.10G124100 Manihot esculenta HOM05D008353 ORTHO05D001895 2.0e-06 56.2 115 29.6
Gohir.D04G176526 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-06 55.8 103 32.0
Manes.10G123900 Manihot esculenta HOM05D008353 ORTHO05D001895 2.6e-06 55.8 115 30.4
Gorai.012G168100 Gossypium raimondii HOM05D002599 ORTHO05D036187 7.6e-06 54.3 103 32.0


User provided reference genes

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