Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0199400 Salix brachista HOM05D005945 ORTHO05D006749 2.9e-91 338.6 173 100.0
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 3.1e-29 132.5 91 72.5
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 9.4e-26 120.9 91 70.3
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 5.2e-16 88.6 94 50.0
Potri.002G262601 Populus trichocarpa HOM05D005945 ORTHO05D006749 1.5e-15 87.0 53 79.2
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 9.8e-15 84.3 94 46.8
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 2.8e-14 82.8 85 49.4
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 2.4e-13 79.7 86 48.8
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 7.0e-13 78.2 86 51.2
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 7.0e-13 78.2 93 49.5
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 9.1e-13 77.8 91 48.4
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 9.1e-13 77.8 83 55.4
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 9.1e-13 77.8 83 55.4
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 1.2e-12 77.4 86 50.0
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.2e-12 77.4 82 56.1
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 1.6e-12 77.0 84 44.0
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 3.5e-12 75.9 93 46.2
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 5.9e-12 75.1 122 40.2
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 5.9e-12 75.1 91 50.5
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 2.9e-11 72.8 91 48.4
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 2.9e-11 72.8 91 48.4
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 3.8e-11 72.4 91 47.3
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 4.2e-10 68.9 78 44.9
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 5.5e-10 68.6 86 48.8
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 1.6e-09 67.0 86 48.8
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.6e-09 67.0 78 44.9
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.6e-09 67.0 78 44.9
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 2.1e-09 66.6 83 45.8
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 2.1e-09 66.6 99 37.4
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 2.7e-09 66.2 90 44.4
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 2.7e-09 66.2 87 46.0
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 6.1e-09 65.1 90 44.4
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 8.0e-09 64.7 87 44.8
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 8.0e-09 64.7 83 44.6
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.0e-08 64.3 90 44.4
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.0e-08 64.3 77 40.3
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 8.8e-08 61.2 90 43.3
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 1.2e-07 60.8 86 43.0
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 1.2e-07 60.8 86 44.2
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.5e-07 60.5 70 44.3
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 2.6e-07 59.7 94 36.2
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 5.7e-07 58.5 84 38.1
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 9.8e-07 57.8 82 41.5
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.3e-06 57.4 77 41.6
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 1.7e-06 57.0 73 43.8
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 4.9e-06 55.5 70 42.9
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 6.3e-06 55.1 58 50.0
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 6.3e-06 55.1 73 42.5


User provided reference genes

Program Settings