Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 4.3e-80 301.2 145 100.0
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 3.3e-72 275.0 145 87.6
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 4.6e-58 228.0 137 74.5
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 4.6e-58 228.0 143 75.5
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.7e-57 226.1 138 76.1
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 2.3e-57 225.7 137 76.6
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 2.3e-57 225.7 136 76.5
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.0e-57 225.3 137 75.2
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 3.9e-57 224.9 139 74.8
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 3.9e-57 224.9 139 74.8
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.9e-57 224.9 137 76.6
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 1.1e-56 223.4 137 74.5
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 1.1e-56 223.4 137 74.5
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.1e-56 223.4 137 75.2
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 1.9e-56 222.6 136 75.7
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 2.5e-56 222.2 137 74.5
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 7.3e-56 220.7 141 74.5
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.6e-55 219.5 139 74.1
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 2.1e-55 219.2 138 73.2
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 2.8e-55 218.8 139 74.1
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.8e-55 218.8 139 76.3
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 3.6e-55 218.4 141 73.8
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 6.2e-55 217.6 139 70.5
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.4e-54 216.5 137 71.5
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 4.0e-54 214.9 137 70.8
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 4.0e-54 214.9 139 71.9
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 6.8e-54 214.2 135 71.9
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 8.9e-54 213.8 139 72.7
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 1.5e-53 213.0 144 70.1
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.6e-53 212.2 139 71.2
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 3.4e-53 211.8 142 70.4
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.4e-53 211.8 132 75.0
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 7.6e-53 210.7 139 71.2
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 9.9e-53 210.3 137 72.3
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.3e-52 209.9 142 67.6
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.3e-52 209.9 139 69.8
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.3e-52 209.9 139 69.8
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.7e-52 209.5 137 70.1
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 4.9e-52 208.0 142 69.0
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 6.4e-52 207.6 139 73.4
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 8.4e-52 207.2 139 72.7
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 1.4e-51 206.5 139 71.9
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.4e-51 206.5 142 69.0
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 1.9e-51 206.1 136 69.1
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.9e-51 206.1 137 71.5
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 4.1e-51 204.9 139 68.3
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 4.1e-51 204.9 137 70.8
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 5.4e-51 204.5 137 70.1
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 5.4e-51 204.5 139 72.7
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 7.1e-51 204.1 138 66.7
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 9.2e-51 203.8 142 69.7
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 1.2e-50 203.4 139 70.5
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.6e-50 203.0 137 70.1
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.6e-50 203.0 133 70.7
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 2.1e-50 202.6 136 69.1
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 2.1e-50 202.6 136 69.1
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 2.1e-50 202.6 137 67.2
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 2.7e-50 202.2 139 71.2
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.7e-50 202.2 137 69.3
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 3.5e-50 201.8 139 70.5
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 4.6e-50 201.4 137 72.3
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 7.8e-50 200.7 137 66.4
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.0e-49 200.3 139 69.1
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 1.3e-49 199.9 139 69.1
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 2.3e-49 199.1 136 64.0
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 2.3e-49 199.1 136 64.0
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 2.3e-49 199.1 138 63.8
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 2.3e-49 199.1 138 69.6
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.3e-49 199.1 120 79.2
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.3e-49 199.1 134 66.4
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 3.9e-49 198.4 120 77.5
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 3.9e-49 198.4 139 65.5
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 3.9e-49 198.4 139 66.9
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 3.9e-49 198.4 137 67.2
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 6.6e-49 197.6 138 63.0
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 6.6e-49 197.6 136 63.2
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.5e-48 196.4 140 63.6
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 1.5e-48 196.4 139 64.7
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 3.3e-48 195.3 139 69.1
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 4.3e-48 194.9 136 62.5
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 7.3e-48 194.1 139 64.0
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 1.6e-47 193.0 136 63.2
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.6e-47 193.0 139 61.2
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 1.6e-47 193.0 140 62.9
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 2.1e-47 192.6 136 64.7
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 3.6e-47 191.8 138 63.8
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 4.7e-47 191.4 136 64.0
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 8.1e-47 190.7 139 63.3
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 1.1e-46 190.3 143 64.3
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 1.8e-46 189.5 135 64.4
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 5.2e-46 188.0 139 61.9
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 6.9e-46 187.6 136 63.2
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 1.5e-45 186.4 134 63.4
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 2.0e-45 186.0 111 75.7
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 5.8e-45 184.5 129 65.9
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 5.8e-45 184.5 129 65.9
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 9.9e-45 183.7 124 72.6
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 9.9e-45 183.7 124 72.6
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 1.7e-44 183.0 107 76.6
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 2.2e-44 182.6 131 67.9
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 2.2e-44 182.6 143 56.6
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 3.8e-44 181.8 148 60.8
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 6.4e-44 181.0 124 71.8
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 1.1e-43 180.3 123 68.3
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.9e-43 179.5 120 69.2
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 4.2e-43 178.3 120 69.2
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 4.2e-43 178.3 136 62.5
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 5.4e-43 177.9 140 62.9
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 2.7e-42 175.6 109 73.4
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 3.5e-42 175.3 117 70.1
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 9.6e-40 167.2 114 68.4
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 3.6e-39 165.2 137 57.7
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 6.9e-38 161.0 137 57.7
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 2.0e-37 159.5 124 66.1
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.3e-33 146.7 119 53.8
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.3e-33 146.0 121 55.4
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 6.7e-33 144.4 116 55.2
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 4.3e-32 141.7 96 70.8
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 9.6e-32 140.6 110 62.7
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 9.6e-32 140.6 108 56.5
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 9.6e-32 140.6 120 53.3
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 9.6e-32 140.6 115 56.5
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.8e-30 136.3 93 67.7
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 6.9e-30 134.4 87 70.1
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.2e-29 133.7 113 54.9
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 8.4e-28 127.5 85 63.5
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.7e-26 122.5 83 67.5
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 6.0e-26 121.3 121 48.8
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.1e-19 100.5 91 57.1
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 4.8e-15 85.1 89 50.6
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.3e-12 77.0 53 67.9
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 2.5e-08 62.8 48 60.4
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 4.8e-07 58.5 50 54.0


User provided reference genes

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