Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 4.8e-217 757.7 415 100.0
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 8.2e-169 597.4 389 85.9
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 1.3e-129 467.2 327 74.6
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 3.0e-126 456.1 319 73.4
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 1.9e-125 453.4 322 71.7
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 5.6e-125 451.8 328 72.0
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 9.5e-125 451.1 328 71.6
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 9.5e-125 451.1 322 71.4
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 9.5e-125 451.1 311 73.3
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 2.8e-124 449.5 326 73.0
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 6.2e-124 448.4 326 71.2
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 1.1e-123 447.6 326 70.9
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 1.4e-123 447.2 314 73.9
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 2.3e-123 446.4 306 75.2
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 5.2e-123 445.3 326 71.2
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 6.8e-123 444.9 326 70.6
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 6.8e-123 444.9 326 70.2
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 8.9e-123 444.5 326 70.2
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 8.9e-123 444.5 326 70.2
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 1.2e-122 444.1 326 70.2
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 1.5e-122 443.7 326 71.5
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.5e-122 443.7 304 75.3
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 3.4e-122 442.6 326 69.9
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 3.4e-122 442.6 326 69.9
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 3.4e-122 442.6 326 71.8
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 3.4e-122 442.6 327 69.4
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 3.4e-122 442.6 311 73.6
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 4.4e-122 442.2 326 71.5
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 9.8e-122 441.0 305 73.4
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 1.3e-121 440.7 326 69.9
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 2.2e-121 439.9 304 74.7
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 2.2e-121 439.9 304 74.7
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 2.2e-121 439.9 390 62.8
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 4.9e-121 438.7 326 70.6
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 6.4e-121 438.3 315 71.4
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 8.3e-121 438.0 316 71.8
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 8.3e-121 438.0 316 71.8
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 1.1e-120 437.6 304 74.3
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 1.4e-120 437.2 326 71.2
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 1.9e-120 436.8 326 69.6
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 1.9e-120 436.8 328 69.2
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 1.9e-120 436.8 324 71.0
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 3.2e-120 436.0 304 74.0
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 3.2e-120 436.0 323 70.6
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 5.4e-120 435.3 326 69.6
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 5.4e-120 435.3 332 68.4
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 1.2e-119 434.1 327 69.4
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 4.6e-119 432.2 313 72.2
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 6.0e-119 431.8 318 70.8
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 7.8e-119 431.4 327 69.4
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 7.8e-119 431.4 315 70.8
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 1.0e-118 431.0 318 70.8
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 1.3e-118 430.6 326 67.5
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 3.0e-118 429.5 328 68.0
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 6.6e-118 428.3 301 72.8
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 8.6e-118 427.9 327 68.5
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 1.9e-117 426.8 325 68.3
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 3.3e-117 426.0 327 66.7
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 3.3e-117 426.0 326 68.7
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 9.5e-117 424.5 317 69.4
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 9.5e-117 424.5 375 62.7
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 1.6e-116 423.7 327 66.4
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 3.6e-116 422.5 318 68.9
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 3.6e-116 422.5 326 68.7
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 6.2e-116 421.8 301 71.8
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 1.1e-115 421.0 304 71.1
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 3.1e-115 419.5 318 69.2
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 4.0e-115 419.1 301 71.8
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 3.4e-114 416.0 334 66.8
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 3.4e-114 416.0 301 70.8
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 9.9e-114 414.5 341 64.5
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 5.4e-112 408.7 330 67.3
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.2e-111 407.5 306 70.9
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 2.1e-111 406.8 298 70.5
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 7.8e-111 404.8 298 71.5
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 7.8e-111 404.8 298 70.5
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 1.7e-110 403.7 298 71.1
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 2.3e-110 403.3 298 69.8
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 3.9e-110 402.5 326 65.0
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 5.1e-110 402.1 283 72.4
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 1.9e-109 400.2 313 66.8
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 9.6e-109 397.9 337 64.4
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 1.2e-108 397.5 329 64.4
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 1.2e-108 397.5 304 66.4
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 3.6e-108 396.0 302 68.5
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 2.4e-107 393.3 305 66.9
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 2.0e-106 390.2 316 64.6
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 3.4e-106 389.4 316 65.2
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 2.2e-105 386.7 306 65.4
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 3.5e-103 379.4 313 65.5
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 2.1e-100 370.2 281 71.5
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 1.5e-98 364.0 285 65.6
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 1.5e-98 364.0 343 60.3
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 2.1e-87 327.0 322 57.1
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 4.0e-83 312.8 318 54.1
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 3.4e-82 309.7 226 70.8
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 8.2e-76 288.5 295 58.6
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 1.2e-71 274.6 282 57.1
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 1.1e-69 268.1 182 73.6
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 1.1e-69 268.1 293 53.9
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 7.2e-64 248.8 315 44.8
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 1.4e-62 244.6 302 45.0
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 9.7e-61 238.4 319 45.1
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 1.8e-59 234.2 370 42.4
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 2.0e-58 230.7 206 55.3
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 2.0e-58 230.7 188 63.3
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 2.9e-57 226.9 145 78.6
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 3.8e-57 226.5 254 52.8
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 1.8e-43 181.0 144 65.3
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 3.6e-39 166.8 143 61.5
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 4.8e-36 156.4 114 71.1
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 1.7e-33 147.9 123 65.9
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 7.2e-32 142.5 177 46.3
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 5.2e-30 136.3 124 60.5
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 1.3e-28 131.7 295 32.9
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 1.8e-22 111.3 82 68.3
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 6.2e-15 86.3 261 28.0
Lsat_1_v5_gn_9_60420 Lactuca sativa HOM05D001780 ORTHO05D008079 3.4e-13 80.5 46 84.8
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 4.9e-12 76.6 47 78.7
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 3.2e-11 73.9 178 33.7
MD05G1159200 Malus domestica HOM05D006407 ORTHO05D008079 3.2e-11 73.9 47 74.5


User provided reference genes

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