Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0180500 Salix brachista HOM05D005729 ORTHO05D007026 1.9e-81 305.8 157 100.0
Potri.002G237000 Populus trichocarpa HOM05D005729 ORTHO05D007026 1.0e-50 203.8 180 65.6
Potri.014G145600 Populus trichocarpa HOM05D005729 ORTHO05D007026 8.2e-45 184.1 178 60.7
Manes.04G092600 Manihot esculenta HOM05D005729 ORTHO05D007026 5.7e-38 161.4 181 54.7
PGR142G3540 Punica granatum HOM05D005729 ORTHO05D007026 4.8e-37 158.3 185 54.1
MELO3C005111.2 Cucumis melo HOM05D005729 ORTHO05D007026 1.4e-36 156.8 184 52.7
ClCG01G007820 Citrullus lanatus HOM05D005729 ORTHO05D007026 9.1e-36 154.1 183 51.9
EL10As7g23751 Beta vulgaris HOM05D005729 ORTHO05D007026 1.2e-35 153.7 182 51.1
Ah.02g128910 Amaranthus hybridus HOM05D005729 ORTHO05D007026 2.0e-35 152.9 182 51.1
Sed0006238 Sechium edule HOM05D005729 ORTHO05D007026 2.0e-35 152.9 183 51.4
CsaV3_5G024890 Cucumis sativus L. HOM05D005729 ORTHO05D007026 4.5e-35 151.8 184 51.6
Sed0018343 Sechium edule HOM05D005729 ORTHO05D007026 5.9e-35 151.4 184 50.5
THA.LOC104815860 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 1.3e-34 150.2 184 49.5
Cpa.g.sc9.286 Carica papaya HOM05D005729 ORTHO05D007026 2.9e-34 149.1 188 51.6
MD05G1139400 Malus domestica HOM05D005729 ORTHO05D007026 2.9e-34 149.1 180 50.6
MD00G1041400 Malus domestica HOM05D005729 ORTHO05D007026 3.8e-34 148.7 200 47.5
EL10Ac6g13393 Beta vulgaris HOM05D005729 ORTHO05D007026 5.0e-34 148.3 182 50.5
FvH4_4g34010 Fragaria vesca HOM05D005729 ORTHO05D007026 5.0e-34 148.3 180 50.0
Thhalv10017252m.g Eutrema salsugineum HOM05D005729 ORTHO05D007026 1.5e-33 146.7 186 48.9
FAN17G0918 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.9e-33 146.4 180 50.0
FAN22G1114 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.9e-33 146.4 180 50.0
FAN25G1272 Fragaria x ananassa HOM05D005729 ORTHO05D007026 2.5e-33 146.0 179 49.7
Actinidia19554 Actinidia chinensis HOM05D005729 ORTHO05D007026 3.2e-33 145.6 188 49.5
Prupe.2G125900 Prunus persica HOM05D005729 ORTHO05D007026 3.2e-33 145.6 184 50.0
FAN12G1178 Fragaria x ananassa HOM05D005729 ORTHO05D007026 4.2e-33 145.2 180 49.4
Duzib187G1006 Durio zibethinus HOM05D005729 ORTHO05D007026 5.5e-33 144.8 183 48.1
THA.LOC104826200 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 5.5e-33 144.8 189 48.7
AL4G26660 Arabidopsis lyrata HOM05D005729 ORTHO05D007026 7.2e-33 144.4 181 50.3
Sp4g13900 Schrenkiella parvula HOM05D005729 ORTHO05D007026 7.2e-33 144.4 187 48.1
Nn4g22156 Nelumbo nucifera HOM05D005729 ORTHO05D007026 1.6e-32 143.3 179 48.0
Nitab4.5_0002172g0090 Nicotiana tabacum HOM05D005729 ORTHO05D007026 1.6e-32 143.3 184 47.3
FAN21G1155 Fragaria x ananassa HOM05D005729 ORTHO05D007026 3.6e-32 142.1 180 48.9
PGSC0003DMG400035897 Solanum tuberosum HOM05D005729 ORTHO05D007026 3.6e-32 142.1 180 46.7
CANSAT64G2014 Cannabis sativa HOM05D005729 ORTHO05D007026 4.7e-32 141.7 181 51.4
AUR62036639 Chenopodium quinoa HOM05D005729 ORTHO05D007026 4.7e-32 141.7 185 48.6
Aa31LG5G5560 Aethionema arabicum HOM05D005729 ORTHO05D007026 6.1e-32 141.4 181 48.6
CiPaw.03G002600 Carya illinoinensis HOM05D005729 ORTHO05D007026 6.1e-32 141.4 183 49.7
Lalb_Chr22g0359961 Lupinus albus HOM05D005729 ORTHO05D007026 8.0e-32 141.0 188 49.5
Solyc02g094490.4 Solanum lycopersicum HOM05D005729 ORTHO05D007026 8.0e-32 141.0 180 47.2
AT2G31410 Arabidopsis thaliana HOM05D005729 ORTHO05D007026 1.4e-31 140.2 182 49.5
CAN.G473.157 Capsicum annuum HOM05D005729 ORTHO05D007026 1.8e-31 139.8 180 46.7
BcaC02g07982 Brassica carinata HOM05D005729 ORTHO05D007026 4.0e-31 138.7 184 48.4
A03p17590 Brassica napus HOM05D005729 ORTHO05D007026 4.0e-31 138.7 184 47.8
C04p61110 Brassica napus HOM05D005729 ORTHO05D007026 4.0e-31 138.7 184 48.4
BolC4t27596H Brassica oleracea HOM05D005729 ORTHO05D007026 4.0e-31 138.7 184 48.4
RcHm_v2.0_Chr5g0049531 Rosa chinensis HOM05D005729 ORTHO05D007026 4.0e-31 138.7 181 49.2
TWI34G0826 Tripterygium wilfordii HOM05D005729 ORTHO05D007026 4.0e-31 138.7 186 48.9
CSS0020873 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 6.7e-31 137.9 191 45.0
Glyma.19G102200 Glycine max HOM05D005729 ORTHO05D007026 6.7e-31 137.9 183 46.4
Medtr7g083930 Medicago truncatula HOM05D005729 ORTHO05D007026 8.8e-31 137.5 185 48.1
Psat3g093680 Pisum sativum HOM05D005729 ORTHO05D007026 8.8e-31 137.5 187 47.6
Sc07g0003710 Simmondsia chinensis HOM05D005729 ORTHO05D007026 8.8e-31 137.5 184 50.5
Thecc.04G047000 Theobroma cacao HOM05D005729 ORTHO05D007026 8.8e-31 137.5 187 47.6
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 1.2e-30 137.1 184 47.8
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 1.2e-30 137.1 184 47.8
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 1.2e-30 137.1 184 47.8
Sopen02g039170 Solanum pennellii HOM05D005729 ORTHO05D007026 1.2e-30 137.1 180 45.6
TAR628G1373 Trochodendron aralioides HOM05D005729 ORTHO05D007026 2.0e-30 136.3 184 48.4
TAR629G2671 Trochodendron aralioides HOM05D005729 ORTHO05D007026 2.0e-30 136.3 184 48.4
Carub.0004s1273 Capsella rubella HOM05D005729 ORTHO05D007026 3.3e-30 135.6 182 47.3
Dinv33283 Davidia involucrata HOM05D005729 ORTHO05D007026 7.5e-30 134.4 195 46.2
Lsat_1_v5_gn_2_94961 Lactuca sativa HOM05D005729 ORTHO05D007026 7.5e-30 134.4 188 45.2
Phvul.001G085400 Phaseolus vulgaris HOM05D005729 ORTHO05D007026 7.5e-30 134.4 184 47.3
BcaB01g04046 Brassica carinata HOM05D005729 ORTHO05D007026 9.7e-30 134.0 186 46.2
Ca_08134_v3 Cicer arietinum L. HOM05D005729 ORTHO05D007026 1.3e-29 133.7 182 47.3
TPR.G10334 Trifolium pratense HOM05D005729 ORTHO05D007026 1.3e-29 133.7 181 48.6
TAR371G0439 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.7e-29 133.3 184 47.3
CARHR125040 Cardamine hirsuta HOM05D005729 ORTHO05D007026 2.2e-29 132.9 185 45.9
Peaxi162Scf00420g00083 Petunia axillaris HOM05D005729 ORTHO05D007026 2.2e-29 132.9 182 45.6
DCAR_014472 Daucus carota HOM05D005729 ORTHO05D007026 3.7e-29 132.1 188 48.4
Dinv25620 Davidia involucrata HOM05D000884 ORTHO05D002127 3.7e-29 132.1 183 49.2
COL.COLO4_13365 Corchorus olitorius HOM05D005729 ORTHO05D007026 4.8e-29 131.7 101 68.3
SalBow7G1413 Salvia bowleyana HOM05D005729 ORTHO05D007026 4.8e-29 131.7 184 48.4
A04p24280 Brassica napus HOM05D005729 ORTHO05D007026 6.3e-29 131.3 184 46.7
BraA04t17947Z Brassica rapa HOM05D005729 ORTHO05D007026 6.3e-29 131.3 184 46.7
Glyma.16G049200 Glycine max HOM05D005729 ORTHO05D007026 6.3e-29 131.3 186 45.7
Gohir.D07G239700 Gossypium hirsutum HOM05D005729 ORTHO05D007026 6.3e-29 131.3 183 45.4
Aqoxy5G03273 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 8.2e-29 131.0 184 43.5
MBI07_g07331_MAGBIO Magnolia biondii HOM05D005729 ORTHO05D007026 8.2e-29 131.0 179 46.4
Oeu003419.1 Olea europaea HOM05D005729 ORTHO05D007026 1.1e-28 130.6 188 47.3
Aqoxy5G03167 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 2.4e-28 129.4 183 45.4
QL11p027744 Quercus lobata HOM05D005729 ORTHO05D007026 2.4e-28 129.4 181 46.4
Cfa016824 Carpinus fangiana HOM05D005729 ORTHO05D007026 5.3e-28 128.3 193 46.1
Lju41C60T1 Lonicera japonica HOM05D005729 ORTHO05D007026 9.1e-28 127.5 192 43.8
SGA_v2.0_scaffold47G17637 Striga asiatica HOM05D005729 ORTHO05D007026 1.2e-27 127.1 186 46.2
Lj1g0015500 Lotus japonicus HOM05D005729 ORTHO05D007026 2.0e-27 126.3 185 45.4
AUR62034632 Chenopodium quinoa HOM05D000604 ORTHO05D004512 4.5e-27 125.2 139 54.7
Gorai.001G275800 Gossypium raimondii HOM05D005729 ORTHO05D007026 4.5e-27 125.2 183 44.3
HanXRQChr14g0451391 Helianthus annuus HOM05D005729 ORTHO05D007026 4.5e-27 125.2 185 44.9
unitig_92.g28207 Utricularia gibba HOM05D005729 ORTHO05D007026 1.0e-26 124.0 187 46.0
arahy.Tifrunner.gnm1.ann1.33W0XH Arachis hypogaea HOM05D005729 ORTHO05D007026 1.7e-26 123.2 190 43.7
Cfa007167 Carpinus fangiana HOM05D005729 ORTHO05D007026 1.7e-26 123.2 181 46.4
HPP92_011631 Vanilla planifolia HOM05D005729 ORTHO05D007026 1.7e-26 123.2 183 44.3
Eucgr.G01937 Eucalyptus grandis HOM05D005729 ORTHO05D007026 2.9e-26 122.5 183 43.2
Haze_19869 Corylus avellana HOM05D005729 ORTHO05D007026 5.0e-26 121.7 193 45.1
Duzib264G0852 Durio zibethinus HOM05D005729 ORTHO05D007026 8.5e-26 120.9 185 43.8
Ciclev10016760m.g Citrus clementina HOM05D005729 ORTHO05D007026 1.9e-25 119.8 185 43.2
RcHm_v2.0_Chr6g0252241 Rosa chinensis HOM05D005729 ORTHO05D007026 2.5e-25 119.4 123 59.3
Migut.K01484 Erythranthe guttata HOM05D005729 ORTHO05D007026 3.2e-25 119.0 183 45.4
Atru.chr6.2652 Acer truncatum HOM05D005729 ORTHO05D007026 7.2e-25 117.9 185 43.2
ECA238G1999 Erigeron canadensis HOM05D005729 ORTHO05D007026 9.4e-25 117.5 183 42.1
Haze_14943 Corylus avellana HOM05D005729 ORTHO05D007026 1.2e-24 117.1 181 45.3
Zm00001eb183750 Zea mays HOM05D005729 ORTHO05D007026 1.4e-23 113.6 181 40.9
ATR0559G324 Amborella trichopoda HOM05D005729 ORTHO05D007026 5.2e-23 111.7 190 40.5
Gohir.A07G232500 Gossypium hirsutum HOM05D005729 ORTHO05D007026 8.8e-23 110.9 183 41.0
RcHm_v2.0_Chr2g0115461 Rosa chinensis HOM05D005729 ORTHO05D007026 5.7e-22 108.2 123 54.5
RcHm_v2.0_Chr7g0240621 Rosa chinensis HOM05D005729 ORTHO05D007026 1.3e-21 107.1 123 54.5
CDE06G2057 Ceratophyllum demersum HOM05D005729 ORTHO05D007026 6.3e-21 104.8 118 50.8
RcHm_v2.0_Chr2g0117931 Rosa chinensis HOM05D005729 ORTHO05D007026 1.4e-20 103.6 123 52.8
Nitab4.5_0000519g0260 Nicotiana tabacum HOM05D005729 ORTHO05D007026 7.0e-20 101.3 140 45.7
RcHm_v2.0_Chr5g0026441 Rosa chinensis HOM05D005729 ORTHO05D007026 7.0e-20 101.3 123 52.8
RcHm_v2.0_Chr5g0057561 Rosa chinensis HOM05D005729 ORTHO05D007026 7.0e-20 101.3 123 53.7
Haze_19868 Corylus avellana HOM05D005729 ORTHO05D007026 1.2e-19 100.5 97 58.8
Os02g0595400 Oryza sativa ssp. japonica HOM05D005729 ORTHO05D007026 1.2e-19 100.5 178 36.0
Zm00001eb246070 Zea mays HOM05D005729 ORTHO05D007026 2.0e-19 99.8 178 36.5
PSO478G2072 Papaver somniferum HOM05D005729 ORTHO05D007026 3.5e-19 99.0 178 41.6
Rhsim08G0039300 Rhododendron simsii HOM05D005729 ORTHO05D007026 3.5e-19 99.0 153 44.4
CSS0008758 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.3e-18 97.1 132 45.5
PSO017G0758 Papaver somniferum HOM05D005729 ORTHO05D007026 1.7e-18 96.7 178 39.9
RcHm_v2.0_Chr1g0315821 Rosa chinensis HOM05D005729 ORTHO05D007026 1.7e-18 96.7 123 51.2
CSS0019060 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 3.3e-17 92.4 132 44.7
RcHm_v2.0_Chr6g0272931 Rosa chinensis HOM05D005729 ORTHO05D007026 9.5e-17 90.9 123 51.2
Cc07_g01230 Coffea canephora HOM05D005729 ORTHO05D007026 2.1e-16 89.7 209 38.8
Psat4g074560 Pisum sativum HOM05D005729 ORTHO05D007026 2.8e-16 89.4 116 49.1
Solyc03g083260.1 Solanum lycopersicum HOM05D005729 ORTHO05D007026 4.0e-15 85.5 84 56.0
Sc14g0008230 Simmondsia chinensis HOM05D005729 ORTHO05D007026 8.9e-15 84.3 110 51.8
Pp3c11_25830 Physcomitrium patens HOM05D005729 ORTHO05D007026 2.2e-13 79.7 178 37.6
EL10Ac1g01380 Beta vulgaris HOM05D005729 ORTHO05D007026 2.7e-11 72.8 66 59.1
RcHm_v2.0_Chr6g0295141 Rosa chinensis HOM05D005729 ORTHO05D007026 5.9e-11 71.6 84 53.6
Mapoly0127s0012 Marchantia polymorpha HOM05D005729 ORTHO05D007026 1.0e-10 70.9 123 42.3
Hma1.2p1_0033F.1_g021130 Hydrangea macrophylla HOM05D005729 ORTHO05D007026 7.3e-09 64.7 72 50.0
Atru.chr6.2684 Acer truncatum HOM05D005729 ORTHO05D007026 2.0e-06 56.6 53 58.5
Psat4g074600 Pisum sativum HOM05D005729 ORTHO05D007026 5.8e-06 55.1 78 42.3


User provided reference genes

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